; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G23220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G23220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionWHy domain-containing protein
Genome locationChr6:20949606..20950506
RNA-Seq ExpressionCSPI06G23220
SyntenyCSPI06G23220
Gene Ontology termsGO:0009269 - response to desiccation (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup
IPR013990 - Water stress and hypersensitive response domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061714.1 late embryogenesis abundant hydroxyproline-rich glycoprotein [Cucumis melo var. makuwa]2.4e-9597.27Show/hide
Query:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
        MGKKRNWSW+SALVGAASA+AATAIISAKPKDPTFHLISIKFTSFKLKPPVVD ELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
Subjt:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS

Query:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN
        CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFA+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL+LFLN
Subjt:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN

KAE8647360.1 hypothetical protein Csa_003928 [Cucumis sativus]7.6e-9799.45Show/hide
Query:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
        MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
Subjt:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS

Query:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN
        CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL+LFLN
Subjt:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN

XP_004140159.2 uncharacterized protein LOC101218134 [Cucumis sativus]7.6e-9799.45Show/hide
Query:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
        MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
Subjt:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS

Query:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN
        CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL+LFLN
Subjt:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN

XP_008449575.2 PREDICTED: uncharacterized protein LOC103491417 [Cucumis melo]2.4e-9597.27Show/hide
Query:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
        MGKKRNWSW+SALVGAASA+AATAIISAKPKDPTFHLISIKFTSFKLKPPVVD ELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
Subjt:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS

Query:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN
        CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFA+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL+LFLN
Subjt:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN

XP_038900652.1 uncharacterized protein LOC120087813 [Benincasa hispida]3.5e-9496.15Show/hide
Query:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
        MGKKRNWSW+SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPVVD ELILTVHVTNPNVAPIHYSSTAMSIFY+GSLLGSAQVDAGSQQPRS
Subjt:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS

Query:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFL
        CQVLRLPARLDGLKLAHHGSRFISDVAKREM+LDASVDIGGFA+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL+LFL
Subjt:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFL

TrEMBL top hitse value%identityAlignment
A0A0A0KGW5 WHy domain-containing protein3.7e-9799.45Show/hide
Query:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
        MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
Subjt:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS

Query:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN
        CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL+LFLN
Subjt:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN

A0A1S3BMZ9 uncharacterized protein LOC1034914171.2e-9597.27Show/hide
Query:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
        MGKKRNWSW+SALVGAASA+AATAIISAKPKDPTFHLISIKFTSFKLKPPVVD ELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
Subjt:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS

Query:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN
        CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFA+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL+LFLN
Subjt:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN

A0A5D3B864 Late embryogenesis abundant hydroxyproline-rich glycoprotein1.2e-9597.27Show/hide
Query:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
        MGKKRNWSW+SALVGAASA+AATAIISAKPKDPTFHLISIKFTSFKLKPPVVD ELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS
Subjt:  MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRS

Query:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN
        CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFA+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL+LFLN
Subjt:  CQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN

A0A6J1H295 uncharacterized protein LOC1114594454.1e-8891.35Show/hide
Query:  MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQP
        M KKR+WSW+  SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPVVD ELILTVHVTNPNVAPIHYSST+MSIFY+GSLLGSA VDAGSQQ 
Subjt:  MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQP

Query:  RSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN
        RSCQVLRLPARLDGLKLAH+GSRFISDV KREMVLDASVDIGG ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL+LFL+
Subjt:  RSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN

A0A6J1K4X2 uncharacterized protein LOC1114907771.4e-8891.35Show/hide
Query:  MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQP
        M KKR+WSW+  SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPV+D ELILTVHVTNPNVAPIHYSST+MSIFY+GSLLGSAQVDAGSQQ 
Subjt:  MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQP

Query:  RSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN
        RSCQVLRLPARLDGLKLAH+GSRFISDV KREMVLDASVDIGG ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL+LFL+
Subjt:  RSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52330.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family7.0e-0827.34Show/hide
Query:  PKDPTFHLISIKFTSFKL--KP-PVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDV
        P DP   +I +K +   +  +P P +D  L++T+ V+N +V    ++   ++I Y G  LG    D G         L   A LDG+ +       I D+
Subjt:  PKDPTFHLISIKFTSFKL--KP-PVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDV

Query:  AKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPV
        AK  +  D   +  G   VL++    K  V   + VD V
Subjt:  AKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPV

AT1G52330.2 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family7.8e-0727.34Show/hide
Query:  PKDPTFHLISIKFTSFKL--KP-PVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDV
        P DP   +I +K +   +  +P P +D  L++T+ V+N +V    ++   ++I Y G  LG    D G         L   A LDG+ +       I D+
Subjt:  PKDPTFHLISIKFTSFKL--KP-PVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHHGSRFISDV

Query:  AKREMVLDASVDIGGFARVLWWSHKFKV
        AK  +  D   +  G   VL++    KV
Subjt:  AKREMVLDASVDIGGFARVLWWSHKFKV

AT3G44380.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family6.1e-6868.33Show/hide
Query:  KKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQ
        +K  WSW+SAL+GAASA AA +++SAKPKDPTFHLISI  TS KL  PV+D EL+LTVHVTNPN+A IHYSST M+I Y+G++LGSA+V AGSQ  RSCQ
Subjt:  KKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQ

Query:  VLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFL
        +LRLPARLDG++LA H  +F SDVA REM L+A + I G A+VLWW H F+VHVDS +TVDPVFLDV+ QEN SQ+ LFL
Subjt:  VLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAAAAACGTAACTGGAGCTGGACCTCCGCTCTTGTCGGAGCGGCGTCGGCAATTGCAGCCACGGCCATCATTTCCGCAAAGCCCAAGGACCCCACCTTTCACTT
GATCTCAATTAAATTCACTTCCTTCAAGCTCAAGCCGCCGGTGGTGGACACCGAGCTTATCCTCACCGTCCACGTCACCAACCCCAACGTCGCTCCCATCCACTACTCCT
CCACCGCTATGTCCATTTTCTACGAGGGTTCCCTCCTCGGGTCGGCCCAGGTGGATGCCGGTTCGCAGCAGCCCCGGTCGTGTCAGGTTCTACGACTTCCAGCCCGGCTG
GACGGCCTGAAACTGGCCCACCACGGCAGCCGGTTCATCTCCGACGTGGCGAAGCGAGAGATGGTTCTGGATGCGAGTGTGGACATTGGGGGTTTTGCGAGAGTGCTGTG
GTGGAGTCACAAATTCAAGGTCCACGTGGACAGCCATCTCACCGTTGATCCCGTCTTCCTTGATGTCCTTGATCAGGAAAACACTTCTCAACTTCAGCTCTTTCTTAATT
AG
mRNA sequenceShow/hide mRNA sequence
CCCACTCTGTCACTACACCTCATCTTTCCATTTCCTTCATTCTCTCTCTAACTTTACTTTCTCAAAATCTCACCCATCTCTCCTTCCTCCTTCCGCCGGCGAAGAAGAAG
ATGGGGAAAAAACGTAACTGGAGCTGGACCTCCGCTCTTGTCGGAGCGGCGTCGGCAATTGCAGCCACGGCCATCATTTCCGCAAAGCCCAAGGACCCCACCTTTCACTT
GATCTCAATTAAATTCACTTCCTTCAAGCTCAAGCCGCCGGTGGTGGACACCGAGCTTATCCTCACCGTCCACGTCACCAACCCCAACGTCGCTCCCATCCACTACTCCT
CCACCGCTATGTCCATTTTCTACGAGGGTTCCCTCCTCGGGTCGGCCCAGGTGGATGCCGGTTCGCAGCAGCCCCGGTCGTGTCAGGTTCTACGACTTCCAGCCCGGCTG
GACGGCCTGAAACTGGCCCACCACGGCAGCCGGTTCATCTCCGACGTGGCGAAGCGAGAGATGGTTCTGGATGCGAGTGTGGACATTGGGGGTTTTGCGAGAGTGCTGTG
GTGGAGTCACAAATTCAAGGTCCACGTGGACAGCCATCTCACCGTTGATCCCGTCTTCCTTGATGTCCTTGATCAGGAAAACACTTCTCAACTTCAGCTCTTTCTTAATT
AGTAATAATAATTAGTTCCCTTCTCTTTCTATGATATTGTTAATGGATATTTTTGGTACACAAATTCATAACCATAGTTCCCACCCCACCCTGTTTCATTATGTTATATT
AATTCATCTTTGCATTTCATAGTTCACTATCTTTTCTTAATGTTTTTGGTTCATTGTAGGATTATCAATTTTCTTCTATTTTTGTTTAAACATTAGGGTTTTGTGAAATT
AAATACCATTCATTATTGCAT
Protein sequenceShow/hide protein sequence
MGKKRNWSWTSALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARL
DGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLQLFLN