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CSPI06G23340 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G23340
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein GL2-INTERACTING REPRESSOR 1
Genome locationChr6:21021061..21021909
RNA-Seq ExpressionCSPI06G23340
SyntenyCSPI06G23340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061725.1 hypothetical protein E6C27_scaffold212G001000 [Cucumis melo var. makuwa]5.0e-4390Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGE-EHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVF
        MSKRSRSSEAEVELRVNLN+SPT SSSSSSVSTFGGSGSGS     G+SCLSCEGE +HGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVF
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGE-EHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVF

Query:  LDFFKQQPHH
        LDFFKQQP H
Subjt:  LDFFKQQPHH

KAG6605971.1 hypothetical protein SDJN03_03288, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2870.54Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSG-SSEISVGNSCLSC-EGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNV
        MSKR RSSE EV LRV++NRSPT    +SS+S FGGS SG  S++SV +SCLS  +GE      E I+TRSMMLVGCPGCFMYVMLT+KSSQCPKCKNNV
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSG-SSEISVGNSCLSC-EGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNV

Query:  FLDFFKQQPHHA
        FLDFF QQ HHA
Subjt:  FLDFFKQQPHHA

KAG7010337.1 hypothetical protein SDJN02_27130, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2872.41Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL
        MSKRSRSSE +VELRVNLNR P+ ++SS S     GSGS SS+ISV NSCL  E    GG  EEIITRSMMLVGCPGCFMYVMLTEKSSQCPKC NNVFL
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL

Query:  DFFK------QQPHHA
        DFFK      QQ HHA
Subjt:  DFFK------QQPHHA

KAG7035922.1 hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-2870.54Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSG-SSEISVGNSCLSC-EGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNV
        MSKR RSSE EV LRV++NRSPT    +SS+S FGGS SG  S++SV +SCLS  +GE      E I+TRSMMLVGCPGCFMYVMLT+KSSQCPKCKNNV
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSG-SSEISVGNSCLSC-EGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNV

Query:  FLDFFKQQPHHA
        FLDFF QQ HHA
Subjt:  FLDFFKQQPHHA

KGN48041.1 hypothetical protein Csa_002820 [Cucumis sativus]3.8e-5199.09Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL
        MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTF GSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL

Query:  DFFKQQPHHA
        DFFKQQPHHA
Subjt:  DFFKQQPHHA

TrEMBL top hitse value%identityAlignment
A0A0A0KJX5 Uncharacterized protein1.8e-5199.09Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL
        MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTF GSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL

Query:  DFFKQQPHHA
        DFFKQQPHHA
Subjt:  DFFKQQPHHA

A0A0L9V640 Uncharacterized protein1.1e-1146.43Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISV---GNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNN
        MSKR+RS   EV L ++    P A+SS SS      S S SS++SV    +SC+SCE EE         TR+M+LVGCP C MYVML+E   +CPKCK+ 
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISV---GNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNN

Query:  VFLDFFKQQPHH
        V LDF   + ++
Subjt:  VFLDFFKQQPHH

A0A1S3VZ34 uncharacterized protein LOC1067799136.4e-1246.43Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISV---GNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNN
        MSKR+RS   EV L ++    P A+SS SS      S S SS++SV    +SC+SCE EE         TR+M+LVGCP C MYVML+E   +CPKCK+ 
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISV---GNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNN

Query:  VFLDFFKQQPHH
        V LDF   + ++
Subjt:  VFLDFFKQQPHH

A0A4D6LH76 Uncharacterized protein8.4e-1246.43Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISV---GNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNN
        MSKR+RS   EV L ++  R+ T+  SSS +S+   S S SS++SV    +SC+SCE EE         TR+M+LVGCP C MYVML+E   +CPKCK+ 
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISV---GNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNN

Query:  VFLDFFKQQPHH
        V LDF   + ++
Subjt:  VFLDFFKQQPHH

A0A5D3BBS4 Uncharacterized protein2.4e-4390Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGE-EHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVF
        MSKRSRSSEAEVELRVNLN+SPT SSSSSSVSTFGGSGSGS     G+SCLSCEGE +HGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVF
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGE-EHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVF

Query:  LDFFKQQPHH
        LDFFKQQP H
Subjt:  LDFFKQQPHH

SwissProt top hitse value%identityAlignment
Q9FMS4 Protein salt-induced and EIN3/EIL1-dependent 11.9e-0539.68Show/hide
Query:  SSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLT-EKSSQCPKCKNNVFLDF
        SS ++  +S   C  E  GG  E    +SM++VGCP C MY++ + E   +CP+C ++V LDF
Subjt:  SSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLT-EKSSQCPKCKNNVFLDF

Q9FNI1 Protein GL2-INTERACTING REPRESSOR 15.4e-0838.68Show/hide
Query:  SEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEII---TRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFK
        S    +L + LN SP  SS    V +   S + +S  S  +SC+S E  +    +       T SM+LVGCP C MYVML+E   +CPKCK+ V LDF  
Subjt:  SEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEII---TRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFK

Query:  QQPHHA
        +   +A
Subjt:  QQPHHA

Q9SRN4 Protein GL2-INTERACTING REPRESSOR 28.4e-0940.95Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL
        MS+R+++   ++ELR+NL+  P+ +S  S V +   S + S      +SC+S E  +      E IT SM+LVGCP C MYVML++   +CPKCK+ V L
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL

Query:  DFFKQ
        DF ++
Subjt:  DFFKQ

Arabidopsis top hitse value%identityAlignment
AT3G11600.1 unknown protein5.9e-1040.95Show/hide
Query:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL
        MS+R+++   ++ELR+NL+  P+ +S  S V +   S + S      +SC+S E  +      E IT SM+LVGCP C MYVML++   +CPKCK+ V L
Subjt:  MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFL

Query:  DFFKQ
        DF ++
Subjt:  DFFKQ

AT5G06270.1 unknown protein3.8e-0938.68Show/hide
Query:  SEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEII---TRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFK
        S    +L + LN SP  SS    V +   S + +S  S  +SC+S E  +    +       T SM+LVGCP C MYVML+E   +CPKCK+ V LDF  
Subjt:  SEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEII---TRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFK

Query:  QQPHHA
        +   +A
Subjt:  QQPHHA

AT5G22270.1 unknown protein1.4e-0639.68Show/hide
Query:  SSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLT-EKSSQCPKCKNNVFLDF
        SS ++  +S   C  E  GG  E    +SM++VGCP C MY++ + E   +CP+C ++V LDF
Subjt:  SSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLT-EKSSQCPKCKNNVFLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAGAGATCGAGAAGTAGCGAGGCAGAGGTGGAGTTGAGAGTGAACTTGAACCGGTCACCTACGGCTTCGTCTTCGTCTTCGTCGGTGAGCACGTTTGGTGGATC
AGGATCGGGGTCGTCAGAGATATCAGTGGGGAATTCGTGCTTGTCATGTGAAGGAGAAGAGCATGGTGGGAGATTGGAAGAGATTATAACAAGATCAATGATGTTGGTGG
GATGTCCAGGGTGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCTCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACATCATGCC
TAG
mRNA sequenceShow/hide mRNA sequence
TTCAAATCACAAACCCTGTGCTGTGTAAGCCTCTCTCATCTCTCACATGCATTCCTACAAGTGTCAATAAGTTTTCATTATTTGTTAACTTTTGTTTTTGGTTTTTAGAA
AATGAGCAAGAGATCGAGAAGTAGCGAGGCAGAGGTGGAGTTGAGAGTGAACTTGAACCGGTCACCTACGGCTTCGTCTTCGTCTTCGTCGGTGAGCACGTTTGGTGGAT
CAGGATCGGGGTCGTCAGAGATATCAGTGGGGAATTCGTGCTTGTCATGTGAAGGAGAAGAGCATGGTGGGAGATTGGAAGAGATTATAACAAGATCAATGATGTTGGTG
GGATGTCCAGGGTGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCTCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACATCATGC
CTAG
Protein sequenceShow/hide protein sequence
MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFGGSGSGSSEISVGNSCLSCEGEEHGGRLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA