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CSPI06G24200 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G24200
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:21724441..21726430
RNA-Seq ExpressionCSPI06G24200
SyntenyCSPI06G24200
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047279.1 putative transmembrane protein [Cucumis melo var. makuwa]4.0e-3377.67Show/hide
Query:  MEIVNFMTTMFFLFLLAATPSLSSSEGRASENSNGGID-----------DIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPK-QPNSLD
        MEIVNFMTTMFFLFLL ATPS++SSEG +SE +NGGID           D VYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHH HQLLQPK Q NSL+
Subjt:  MEIVNFMTTMFFLFLLAATPSLSSSEGRASENSNGGID-----------DIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPK-QPNSLD

Query:  PTP
        PTP
Subjt:  PTP

KGN48132.1 hypothetical protein Csa_003970 [Cucumis sativus]1.2e-4598.92Show/hide
Query:  MEIVNFMTTMFFLFLLAATPSLSSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPHP
        MEIVNFMTTMFFLFLLAATPSLSSS+GRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPHP
Subjt:  MEIVNFMTTMFFLFLLAATPSLSSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPHP

XP_022143835.1 uncharacterized protein LOC111013652 [Momordica charantia]7.0e-1459.14Show/hide
Query:  MEIVN-FMTTMFFLFLLAATPSLSSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPH
        MEI +  + T FFLFL+ ATPS+SSS+G  SEN    I   VYEIDYRGPETHSSH   P  HSHG RPWIIHH      QPK  +SL+P+P+
Subjt:  MEIVN-FMTTMFFLFLLAATPSLSSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPH

XP_022925989.1 uncharacterized protein LOC111433241 [Cucurbita moschata]1.0e-1263.1Show/hide
Query:  VNFMTTMFFLFLLAATPSL---SSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQP
        ++F TT+FF+FLL  TPS    SS EG  SEN   G    VYEIDYRGPETHSS HISPP HSHG RPWI+ HHRH L  P  P
Subjt:  VNFMTTMFFLFLLAATPSL---SSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQP

XP_038881428.1 uncharacterized protein LOC120072958 [Benincasa hispida]2.3e-1766.33Show/hide
Query:  MEIVNFMTTMFFLFLLAATPSLSSSEGRASEN-----SNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPHP
        ME+++FM TMFFLFLL ATPSLSS +G  SEN     S+      VYEIDYRGPETHSS HISPPDHSHG RPWI HH +HQ LQPKQP    P P+P
Subjt:  MEIVNFMTTMFFLFLLAATPSLSSSEGRASEN-----SNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPHP

TrEMBL top hitse value%identityAlignment
A0A0A0KIB6 Uncharacterized protein5.8e-4698.92Show/hide
Query:  MEIVNFMTTMFFLFLLAATPSLSSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPHP
        MEIVNFMTTMFFLFLLAATPSLSSS+GRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPHP
Subjt:  MEIVNFMTTMFFLFLLAATPSLSSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPHP

A0A5A7U1B9 Putative transmembrane protein1.9e-3377.67Show/hide
Query:  MEIVNFMTTMFFLFLLAATPSLSSSEGRASENSNGGID-----------DIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPK-QPNSLD
        MEIVNFMTTMFFLFLL ATPS++SSEG +SE +NGGID           D VYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHH HQLLQPK Q NSL+
Subjt:  MEIVNFMTTMFFLFLLAATPSLSSSEGRASENSNGGID-----------DIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPK-QPNSLD

Query:  PTP
        PTP
Subjt:  PTP

A0A6J1CPX6 uncharacterized protein LOC1110136523.4e-1459.14Show/hide
Query:  MEIVN-FMTTMFFLFLLAATPSLSSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPH
        MEI +  + T FFLFL+ ATPS+SSS+G  SEN    I   VYEIDYRGPETHSSH   P  HSHG RPWIIHH      QPK  +SL+P+P+
Subjt:  MEIVN-FMTTMFFLFLLAATPSLSSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPH

A0A6J1EDR4 uncharacterized protein LOC1114332414.9e-1363.1Show/hide
Query:  VNFMTTMFFLFLLAATPSL---SSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQP
        ++F TT+FF+FLL  TPS    SS EG  SEN   G    VYEIDYRGPETHSS HISPP HSHG RPWI+ HHRH L  P  P
Subjt:  VNFMTTMFFLFLLAATPSL---SSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQP

A0A6J1IQ06 uncharacterized protein LOC1114788851.2e-1164.29Show/hide
Query:  VNFMTTMFFLFLLAATPSL---SSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQP
        ++F TT+FFLFLL  TPS    SSSEG  SEN   G    VYEIDYRGPETHSS HISPP  SHG RPWI+HHH H L  P  P
Subjt:  VNFMTTMFFLFLLAATPSL---SSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G03120.1 unknown protein3.7e-0541.79Show/hide
Query:  MTTMFFLFLLAATPSLSSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHH
        M     ++LL A P  +    + SE +    D  VYEIDYRGPETH+S    PP+  HG+ P+I H+
Subjt:  MTTMFFLFLLAATPSLSSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGTCAACTTTATGACAACTATGTTCTTCCTCTTTCTCCTTGCTGCTACCCCTTCACTGTCTTCTTCTGAAGGTAGAGCATCTGAAAACAGTAATGGTGGGAT
AGATGATATTGTTTACGAAATAGATTATAGAGGACCAGAAACTCATTCATCTCATCATATATCTCCACCTGATCACTCCCATGGAAGAAGGCCTTGGATTATTCATCATC
ATCGTCATCAACTTCTTCAACCCAAACAACCCAATTCTCTCGATCCTACTCCTCATCCATAA
mRNA sequenceShow/hide mRNA sequence
CTTATTATTTTATCATTCTTCTTCTTCTTCTTCTTCTTCTCAACAATTTAATTTGGATCTTTTCTTCCTTCTCTCCCATTTTAATTTCTTCTTCTCCTCTTTATTAGAGT
TGTGTGTATATATATAAAAGAATTCTTGTAAAAATTGCTTCCCCATATTTGAGATCTTCTGTGTCATGGAGATCGTCAACTTTATGACAACTATGTTCTTCCTCTTTCTC
CTTGCTGCTACCCCTTCACTGTCTTCTTCTGAAGGTAGAGCATCTGAAAACAGTAATGGTGGGATAGATGATATTGTTTACGAAATAGATTATAGAGGACCAGAAACTCA
TTCATCTCATCATATATCTCCACCTGATCACTCCCATGGAAGAAGGCCTTGGATTATTCATCATCATCGTCATCAACTTCTTCAACCCAAACAACCCAATTCTCTCGATC
CTACTCCTCATCCATAAACCACACACAATTGAAGGGAAGCAAAGTGGGTGAATGGTTAAAGAAGTTTTGGAATTAAAGCAATG
Protein sequenceShow/hide protein sequence
MEIVNFMTTMFFLFLLAATPSLSSSEGRASENSNGGIDDIVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQPNSLDPTPHP