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CSPI06G24760 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G24760
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionzinc finger protein 593
Genome locationChr6:22081966..22083775
RNA-Seq ExpressionCSPI06G24760
SyntenyCSPI06G24760
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR013087 - Zinc finger C2H2-type
IPR022755 - Zinc finger, double-stranded RNA binding
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143276.1 zinc finger protein 593 [Cucumis sativus]9.5e-64100Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

XP_008462489.1 PREDICTED: zinc finger protein 593 [Cucumis melo]3.0e-6298.32Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVK M GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

XP_022143723.1 zinc finger protein 593 [Momordica charantia]3.7e-6094.12Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL KP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKR+K M GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLM+M
Subjt:  AELAAGMGMPDNGPKLMAM

XP_022962632.1 zinc finger protein 593 [Cucurbita moschata]8.3e-6093.28Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFL+ GDDMVY+ L KPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVK M+GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        A+LAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

XP_038882974.1 zinc finger protein 593 [Benincasa hispida]3.7e-6094.96Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+ELAKPEVE+ SLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKR+K M GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

TrEMBL top hitse value%identityAlignment
A0A0A0KHA1 C2H2-type domain-containing protein4.6e-64100Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

A0A1S3CH13 zinc finger protein 5931.5e-6298.32Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVK M GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

A0A6J1CRE9 zinc finger protein 5931.8e-6094.12Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL KP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKR+K M GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLM+M
Subjt:  AELAAGMGMPDNGPKLMAM

A0A6J1HD68 zinc finger protein 5934.0e-6093.28Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFL+ GDDMVY+ L KPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVK M+GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        A+LAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

A0A6J1I5Q7 zinc finger protein 5931.2e-5992.44Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD
        MGGKCPHRSVKKRRYSHK+ARRTKFL+ GDDMVY+ L KPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVK M+GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        A+LAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

SwissProt top hitse value%identityAlignment
B0BLT0 Zinc finger protein 5932.2e-1547.17Show/hide
Query:  HRSVKKRRYSH--KTARRTKFLVKGDDMVYNELAKPEVERPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAE
        H+S KK+  S   KT RR K L    D +++++ KPE  +  L   +D  LPG  Q+YCLHC RYF ++    EHFKTK H++R+KQ L   P+TQ +AE
Subjt:  HRSVKKRRYSH--KTARRTKFLVKGDDMVYNELAKPEVERPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAE

Query:  LAAGMG
         AAGMG
Subjt:  LAAGMG

Q08004 Bud site selection protein 201.8e-1240.59Show/hide
Query:  RYS---HKTARRTKFLVKGDDMVYNELAKPEVERPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAELAAGMG
        RYS   +KT RRT+ L    D++YN+L+  E  +  L  P+DE  PG+GQ+YC+HC +Y         H K K H++RVK++ G  P+TQ  ++ AAG  
Subjt:  RYS---HKTARRTKFLVKGDDMVYNELAKPEVERPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAELAAGMG

Query:  M
        +
Subjt:  M

Q553S1 Zinc finger protein 593 homolog1.9e-1134.19Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPS-LPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQL
        MG    H     ++  +K AR TK   K  D +++E+    +++ S   VD DLPGMGQ YC+HC ++F        H K K H+ RVK+ L   P++  
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPS-LPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQL

Query:  DAELAAGMGMPDNGPKL
        ++++       DNG KL
Subjt:  DAELAAGMGMPDNGPKL

Q9P370 Zinc finger protein bud201.1e-1137.14Show/hide
Query:  VKKRRYSHKTAR----RTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAELAA
        V ++R  H        RT+   +  D ++N+L + E +   LP+D DLPG+GQ+YC+ C RYF +      H K K H++R+K  L   P+TQ +AE A 
Subjt:  VKKRRYSHKTAR----RTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAELAA

Query:  GMGMP
         +G P
Subjt:  GMGMP

Q9U239 Zinc finger protein 593 homolog5.7e-1140Show/hide
Query:  PHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAEL
        P    +K   S+KT +R     K  D ++ +L KPE     L   +D DLPG GQ+YC+ C+R+F +   R  H KTK H+ RVK  L   P+TQ +A  
Subjt:  PHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAEL

Query:  AAGMG
        A G G
Subjt:  AAGMG

Arabidopsis top hitse value%identityAlignment
AT2G36930.1 zinc finger (C2H2 type) family protein8.3e-5075.86Show/hide
Query:  GKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAE
        G+CP R VKKRR SHKTARR KF VKGDD+VY EL KPE E   L +DEDLPGMGQ+YCLHCDRYF+NVSVRD+HFKTK+H+KRV  M+G APH+QLDA+
Subjt:  GKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAE

Query:  LAAGMGMPDNGPKLMA
        LA GMGMPDNGPKLM+
Subjt:  LAAGMGMPDNGPKLMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAAAGTGTCCTCACAGAAGCGTAAAGAAGCGGAGATACTCACACAAGACCGCTAGGCGAACGAAATTTCTTGTCAAAGGGGATGATATGGTTTACAATGAATT
AGCGAAACCTGAGGTAGAGAGGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCCTGCACTGCGACCGATACTTTGCGAATGTGTCTGTGA
GGGATGAGCATTTCAAGACCAAGCGTCACAGGAAGAGGGTAAAACAAATGTTGGGTCCTGCACCTCACACGCAACTGGACGCCGAGCTTGCTGCTGGTATGGGCATGCCT
GATAATGGTCCAAAGCTTATGGCAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATCCCTTCCTCTTTCCCTAGGGATCCGGTGGAACAACCGCCAATAAACAAAACCCTAATTTTACTCCGATTTAGCAATACTTGAGCTCTAGATTGAAGAATATGGGAGGA
AAGTGTCCTCACAGAAGCGTAAAGAAGCGGAGATACTCACACAAGACCGCTAGGCGAACGAAATTTCTTGTCAAAGGGGATGATATGGTTTACAATGAATTAGCGAAACC
TGAGGTAGAGAGGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCCTGCACTGCGACCGATACTTTGCGAATGTGTCTGTGAGGGATGAGC
ATTTCAAGACCAAGCGTCACAGGAAGAGGGTAAAACAAATGTTGGGTCCTGCACCTCACACGCAACTGGACGCCGAGCTTGCTGCTGGTATGGGCATGCCTGATAATGGT
CCAAAGCTTATGGCAATGTGAGCTTATTACTTGTTATACAACTTAAACATTTTTGGTAGTGTAAAGAGCTTATAGTGAGTTGTGTTTCTCGTTTAACTAACAAGATTGAT
TTTGTCAAATACTATTGCTGGCCATGTATTTTATTTGAAGAGTTCTTTTAATCAATTGAATGAAAAGTAGGCCAATTTGAGCTCAGCTGGTTTAGATCAACATACTCCAC
CATGCTCTTTAAGCCATGAAGGGAAAAAGGGGAAAGGTTGTACATATAGAGGTGCTCATTTGGAAAAATATATATCCTAGCGTCTT
Protein sequenceShow/hide protein sequence
MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAELAAGMGMP
DNGPKLMAM