CuGenDBv2

Gene ID	CSPI06G25010
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	L-threonine dehydratase
Genome location	Chr6:22304530..22304772
RNA-Seq Expression	CSPI06G25010
Synteny	CSPI06G25010
Gene Ontology terms	GO:0006567 - threonine catabolic process (biological process) GO:0009097 - isoleucine biosynthetic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0004794 - L-threonine ammonia-lyase activity (molecular function) GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domains	IPR036052 - Tryptophan synthase beta subunit-like PLP-dependent enzyme

Homology

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GenBank top hits

e value

%identity

Alignment

KAF3663063.1 hypothetical protein FXO38_10829 [Capsicum annuum]

2.3e-05

55.38

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Query:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTLFFVLAKTLH
        MMANLSKE+LK GV+C S+ G+HAQ  +AL ++K+G   + IVMP TTP IKV+T F  L   +H
Subjt:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTLFFVLAKTLH

MBL8422642.1 threonine ammonia-lyase, biosynthetic [Candidatus Accumulibacter phosphatis]

8.8e-05

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Query:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL
        + +LSKE+LK GV+CAS  G+HAQ  +ALAANK+G   + IVMP+TTP IKVQ +
Subjt:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL

NQW80975.1 threonine ammonia-lyase, biosynthetic [Polaromonas sp.]

2.0e-04

58.18

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Query:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL
        MANLS  +LK GV+CAS  G+HAQ  +AL+ANK+G T   IVMPSTTP +K+  +
Subjt:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL

WP_012807069.1 threonine ammonia-lyase, biosynthetic [Candidatus Accumulibacter phosphatis]

8.8e-05

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Query:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL
        + +LSKE+LK GV+CAS  G+HAQ  +ALAANK+G   + IVMP+TTP IKVQ +
Subjt:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL

XP_038882927.1 threonine dehydratase 1 biosynthetic, chloroplastic-like [Benincasa hispida]

7.7e-09

74.07

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Query:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQ
        MMANL KEEL  GV+ ASTGGDHAQ  LALAANK+G TE  IVMP+TTP IKV+
Subjt:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQ

TrEMBL top hits

e value

%identity

Alignment

A0A2G2VU03 Threonine dehydratase

2.8e-04

59.62

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Query:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIK
        MMANLS+E+LK GV+C S+ G+HAQ  +ALA++K+G   + IVMP TTP IK
Subjt:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIK

A0A2G2YLM1 PALP domain-containing protein

2.8e-04

59.62

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Query:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIK
        MMANLS+E+LK GV+C S+ G+HAQ  +ALA++K+G   + IVMP TTP IK
Subjt:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIK

A0A4Q3U2V9 Pyridoxal-phosphate dependent enzyme (Fragment)

1.6e-04

58.18

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Query:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL
        MANLS E+L  GV+CAS  G+HAQ  +ALAA K+G   + IVMP+TTPSIK++ +
Subjt:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL

A0A7X6WN68 Threonine ammonia-lyase, biosynthetic

1.2e-04

54.55

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Query:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL
        MA+LS+++LKNGV+CAS  G+HAQ  +ALAAN++G   + IVMP+TTP +K++ +
Subjt:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL

C7RJQ5 L-threonine dehydratase

4.2e-05

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Query:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL
        + +LSKE+LK GV+CAS  G+HAQ  +ALAANK+G   + IVMP+TTP IKVQ +
Subjt:  MANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL

SwissProt top hits

e value

%identity

Alignment

A0FKE6 Threonine dehydratase 1 biosynthetic, chloroplastic

5.3e-05

53.85

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Query:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIK
        MMA L KE+L+ GV+C S+ G+HAQ  +AL+A ++G  +  IVMP TTP IK
Subjt:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIK

P25306 Threonine dehydratase 2 biosynthetic, chloroplastic

3.5e-04

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Query:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL
        MM+NLS+EEL  GV+ AS  G+HAQ  +ALA  ++      IVMP+TTP IK+  +
Subjt:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL

Q9AXU4 Threonine dehydratase

5.9e-04

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Query:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL
        MM  LSKE+L+ GV+ AS  G+HAQ  +AL A ++  T   IVMP TTP IK++ +
Subjt:  MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTL

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGATGGCTAATCTTTCTAAAGAGGAGCTTAAAAATGGAGTTGTTTGTGCATCAACTGGTGGAGACCATGCACAAGCAGCCCTTGCTTTGGCTGCCAACAAAATAGGAAT
TACTGAGATCGCCATTGTTATGCCTTCTACAACCCCTTCAATAAAGGTGCAAACTCTTTTCTTCGTTTTAGCTAAAACCCTCCACTACTTGTTAGAAAGAGAAATGGTGT
GGATAACACAAAAGTGTGGAGAG

mRNA sequence

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Protein sequence

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MMANLSKEELKNGVVCASTGGDHAQAALALAANKIGITEIAIVMPSTTPSIKVQTLFFVLAKTLHYLLEREMVWITQKCGE

CSPI06G25010 (gene) of Cucumber (PI 183967) v1 genome