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CSPI06G25330 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G25330
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S acidic ribosomal protein P2-like
Genome locationChr6:22562331..22564881
RNA-Seq ExpressionCSPI06G25330
SyntenyCSPI06G25330
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025275.1 60S acidic ribosomal protein P2-like [Cucumis melo var. makuwa]2.1e-3088.76Show/hide
Query:  LSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE
        + +VGAEA+VEKIELL+AE+KGKDITELIA GREKMASLPTGAVVAA VAAVPSTVD AAPV AEAKKEEKDDAMDSDEDICFSLFEDE
Subjt:  LSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE

XP_004143377.1 60S acidic ribosomal protein P2 [Cucumis sativus]1.9e-6099.26Show/hide
Query:  MKVVAAYLLAVLGGNKIPSAQDIRVAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVP
        MKVVAAYLLAVLGGNKIPSAQDIRVAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAY REKMASLPTGAVVAAAVAAVP
Subjt:  MKVVAAYLLAVLGGNKIPSAQDIRVAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVP

Query:  STVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE
        STVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE
Subjt:  STVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE

XP_016902906.1 PREDICTED: 60S acidic ribosomal protein P2-like [Cucumis melo]6.2e-4391.96Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDS
        VAAYLLAVLGGNKTPSAQDI TIL SVGAEA+VEKIELL+AE+KGKDITELIA GREKMASLPTGAVVAA VAAVPSTVD AAPV AEAKKEEKDDAMDS
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDS

Query:  DEDICFSLFEDE
        DEDICFSLFEDE
Subjt:  DEDICFSLFEDE

XP_017248547.1 PREDICTED: 60S acidic ribosomal protein P2-like [Daucus carota subsp. sativus]3.8e-2463.96Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEK-DDAMD
        +AAYLLAVLGGN +P+A DI  IL SVGAEAE ++IELL++++KGKDITELIA GREK+AS+P+G   A AVAA P+T   A P  AEAKKEEK +D  +
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEK-DDAMD

Query:  SDEDICFSLFE
        SD+D+C SLF+
Subjt:  SDEDICFSLFE

XP_022143770.1 60S acidic ribosomal protein P2-2-like [Momordica charantia]4.4e-2564.1Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAV-----PSTVDTAAPVGAEAKKEE-K
        VAAYLLAVLGGN +P+A+DI TIL+SVGAEAE EKIELL++++KGKDI E++A GREKMASLP   VVAAAV  +      ++  TAA   AEAKKEE K
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAV-----PSTVDTAAPVGAEAKKEE-K

Query:  DDAMDSDEDICFSLFED
        +D  DSD+DICF+LF++
Subjt:  DDAMDSDEDICFSLFED

TrEMBL top hitse value%identityAlignment
A0A0A0KEV8 Uncharacterized protein9.2e-6199.26Show/hide
Query:  MKVVAAYLLAVLGGNKIPSAQDIRVAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVP
        MKVVAAYLLAVLGGNKIPSAQDIRVAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAY REKMASLPTGAVVAAAVAAVP
Subjt:  MKVVAAYLLAVLGGNKIPSAQDIRVAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVP

Query:  STVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE
        STVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE
Subjt:  STVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE

A0A1S4E3U5 60S acidic ribosomal protein P2-like3.0e-4391.96Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDS
        VAAYLLAVLGGNKTPSAQDI TIL SVGAEA+VEKIELL+AE+KGKDITELIA GREKMASLPTGAVVAA VAAVPSTVD AAPV AEAKKEEKDDAMDS
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDS

Query:  DEDICFSLFEDE
        DEDICFSLFEDE
Subjt:  DEDICFSLFEDE

A0A5A7SLD3 60S acidic ribosomal protein P2-like9.9e-3188.76Show/hide
Query:  LSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE
        + +VGAEA+VEKIELL+AE+KGKDITELIA GREKMASLPTGAVVAA VAAVPSTVD AAPV AEAKKEEKDDAMDSDEDICFSLFEDE
Subjt:  LSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSDEDICFSLFEDE

A0A5D2MD03 Uncharacterized protein6.9e-2463.06Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEK-DDAMD
        VAAYLLAVLGGN +PSA D+  IL SVGAEAE E+I+LL++E+KGKDITELIA GREK+AS+P+G    A  AA P     AAP  AEAKKEEK ++  +
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEK-DDAMD

Query:  SDEDICFSLFE
        SD+D+ FSLF+
Subjt:  SDEDICFSLFE

A0A6J1CPQ6 60S acidic ribosomal protein P2-2-like2.1e-2564.1Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAV-----PSTVDTAAPVGAEAKKEE-K
        VAAYLLAVLGGN +P+A+DI TIL+SVGAEAE EKIELL++++KGKDI E++A GREKMASLP   VVAAAV  +      ++  TAA   AEAKKEE K
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAV-----PSTVDTAAPVGAEAKKEE-K

Query:  DDAMDSDEDICFSLFED
        +D  DSD+DICF+LF++
Subjt:  DDAMDSDEDICFSLFED

SwissProt top hitse value%identityAlignment
O14317 60S acidic ribosomal protein P2-C1.5e-2052.73Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDS
        +AAYLL  +GG  +PSA DI ++LS+VG E+E E++E LI EL GKDI ELIA G EK+A++P+G    AA AA P+    AAP   EA KEE  +  +S
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDS

Query:  DEDICFSLFE
        DED+ F LF+
Subjt:  DEDICFSLFE

O24415 60S acidic ribosomal protein P2B2.0e-2057.52Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPT--GAVVAAAVAAVPSTVDTAAPVGAEAKKEEK-DDA
        +AAYLLAVLGGN +P+A D+ +IL SVGAEA+ EK+E L+ ELK KDITE+IA GRE+++S+P+  GA+   A AAV      AAP   EAKKEEK ++ 
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPT--GAVVAAAVAAVPSTVDTAAPVGAEAKKEEK-DDA

Query:  MDSDEDICFSLFE
         +SDED+ FSLF+
Subjt:  MDSDEDICFSLFE

P41099 60S acidic ribosomal protein P22.8e-2254.95Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDS
        +AA+LLA+LGGN +P+ +D+ +IL+SVGA+A+ +KIELL++++KGKDITELIA GRE++AS+P+G  VA A AA     D  A    E KKEEK +  +S
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDS

Query:  DEDICFSLFED
        DE++ FSLF+D
Subjt:  DEDICFSLFED

P46252 60S acidic ribosomal protein P2A3.6e-2260.36Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEK-DDAMD
        VAAYLLAVL GN +PSA D+T IL SVG E + EK+ELL+++L GKDITELIA GREK AS+P G    A  AA P+    AAP  AEAKKEEK ++  +
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEK-DDAMD

Query:  SDEDICFSLFE
        SD+D+ FSLF+
Subjt:  SDEDICFSLFE

Q9LXM8 60S acidic ribosomal protein P2-44.5e-2054.13Show/hide
Query:  AAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSD
        AA+LLAVLGGN  PSA +I  I+ +VGA+ + E IELL+ E+ GKDI ELIA GREK+AS+P+G  V  AV+A PS+    A   AE K+ +K++  +SD
Subjt:  AAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSD

Query:  EDICFSLFE
        +D+ FSLFE
Subjt:  EDICFSLFE

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family2.7e-2055.36Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPV-GAEAKKEE-KDDAM
        VAAYLLAVL G  +P++ DI TIL SVGAE E  +IELL+ E+KGKD+ ELIA GREK+AS+P+G     AVA+  S          AE+KKEE K++  
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPV-GAEAKKEE-KDDAM

Query:  DSDEDICFSLFE
        +SD+D+ FSLFE
Subjt:  DSDEDICFSLFE

AT2G27710.2 60S acidic ribosomal protein family2.7e-2055.36Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPV-GAEAKKEE-KDDAM
        VAAYLLAVL G  +P++ DI TIL SVGAE E  +IELL+ E+KGKD+ ELIA GREK+AS+P+G     AVA+  S          AE+KKEE K++  
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPV-GAEAKKEE-KDDAM

Query:  DSDEDICFSLFE
        +SD+D+ FSLFE
Subjt:  DSDEDICFSLFE

AT2G27710.3 60S acidic ribosomal protein family2.7e-2055.36Show/hide
Query:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPV-GAEAKKEE-KDDAM
        VAAYLLAVL G  +P++ DI TIL SVGAE E  +IELL+ E+KGKD+ ELIA GREK+AS+P+G     AVA+  S          AE+KKEE K++  
Subjt:  VAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPV-GAEAKKEE-KDDAM

Query:  DSDEDICFSLFE
        +SD+D+ FSLFE
Subjt:  DSDEDICFSLFE

AT3G44590.1 60S acidic ribosomal protein family3.2e-2154.13Show/hide
Query:  AAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSD
        AA+LLAVLGGN  PSA +I  I+ +VGA+ + E IELL+ E+ GKDI ELIA GREK+AS+P+G  V  AV+A PS+    A   AE K+ +K++  +SD
Subjt:  AAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSD

Query:  EDICFSLFE
        +D+ FSLFE
Subjt:  EDICFSLFE

AT3G44590.2 60S acidic ribosomal protein family3.2e-2154.13Show/hide
Query:  AAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSD
        AA+LLAVLGGN  PSA +I  I+ +VGA+ + E IELL+ E+ GKDI ELIA GREK+AS+P+G  V  AV+A PS+    A   AE K+ +K++  +SD
Subjt:  AAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVGAEAKKEEKDDAMDSD

Query:  EDICFSLFE
        +D+ FSLFE
Subjt:  EDICFSLFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAATCCCATCTGCTCAAGATATCAGGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAA
AACCCCATCTGCTCAAGATATCACCACCATTCTCTCCTCTGTTGGAGCTGAAGCTGAGGTTGAAAAGATCGAGCTGCTTATTGCTGAACTTAAGGGCAAGGATATAACTG
AGCTTATTGCCTATGGGAGGGAGAAGATGGCATCATTACCTACAGGCGCTGTCGTTGCAGCTGCTGTGGCTGCAGTCCCCTCTACCGTCGATACTGCTGCTCCTGTTGGA
GCTGAGGCTAAGAAAGAGGAGAAAGATGATGCTATGGACTCTGATGAAGACATTTGCTTCTCTCTGTTTGAAGACGAGTAA
mRNA sequenceShow/hide mRNA sequence
CATTTTTCTTCTTCCCTTCTCATCTCTCTTTCTCTCTCATTTCTTTTCTTTTCAGAAGAAGACGAATCATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGA
AACAAAATCCCATCTGCTCAAGATATCAGGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAACCCCATCTGCTCAAGATATCACCACCATTCTCTCCTCTGT
TGGAGCTGAAGCTGAGGTTGAAAAGATCGAGCTGCTTATTGCTGAACTTAAGGGCAAGGATATAACTGAGCTTATTGCCTATGGGAGGGAGAAGATGGCATCATTACCTA
CAGGCGCTGTCGTTGCAGCTGCTGTGGCTGCAGTCCCCTCTACCGTCGATACTGCTGCTCCTGTTGGAGCTGAGGCTAAGAAAGAGGAGAAAGATGATGCTATGGACTCT
GATGAAGACATTTGCTTCTCTCTGTTTGAAGACGAGTAAGGACTTGGGCTCTTCCTTGTAGTTTCGCTTGGAATTAGGCTTCTAATGTTGCTAGGCACTGGTTGTTGAAA
TTATCAGATTTTCTTTCTTGGATTGATGATCTTTTGCTTTGAGCAGCAAGAAAACAAGCTTTTAATCTTGACTGTCTGATTACCTAGTTTATATATATTTTGCTATTTC
Protein sequenceShow/hide protein sequence
MKVVAAYLLAVLGGNKIPSAQDIRVAAYLLAVLGGNKTPSAQDITTILSSVGAEAEVEKIELLIAELKGKDITELIAYGREKMASLPTGAVVAAAVAAVPSTVDTAAPVG
AEAKKEEKDDAMDSDEDICFSLFEDE