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CSPI06G25340 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G25340
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description60S acidic ribosomal protein P2-like
Genome locationChr6:22566221..22567276
RNA-Seq ExpressionCSPI06G25340
SyntenyCSPI06G25340
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604363.1 hypothetical protein SDJN03_04972, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3470.4Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MKIVAAYLLA+LGGNTHPS+ DI AIL SVG+E +DERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAA      GGG       GAA+A VA
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AEPV EDKKEV EES+++MCFSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

XP_004143310.2 60S acidic ribosomal protein P2 [Cucumis sativus]1.6e-5092Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGG          GAAAAVVA
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AEPVKEDKKEVVEESDEDMCFSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

XP_022925971.1 60S acidic ribosomal protein P2-like [Cucurbita moschata]7.4e-3571.2Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MKIVAAYLLA+LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAA      GGG       GAA+A VA
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AEPV EDKKEV EES+++MCFSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

XP_022977389.1 60S acidic ribosomal protein P2-like [Cucurbita maxima]9.7e-3572Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MKIVAAYLLA LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAA      GGG       GAA+A VA
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AEPVKEDKKEV EES+++MCFSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

XP_023543240.1 60S acidic ribosomal protein P2-2-like [Cucurbita pepo subsp. pepo]2.8e-3470.4Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MKIVAAYLLA+LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKG+D+AE++A GREKMA +   GSAIPVAA      GGG       GAA+A VA
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AEPVKEDKKE  EES+++MCFSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0KKF6 Uncharacterized protein8.0e-5192Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGG          GAAAAVVA
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AEPVKEDKKEVVEESDEDMCFSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

A0A6J1CQB9 60S acidic ribosomal protein P2A-like8.8e-3469.84Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MKIVAAYLLA+LGGN  PS+  IKAIL SVGVE ED+RIELLLSQVKG D+AE+VACGREKMA +PC G+AI V A + +GG            A A VA
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEP-VKEDKKEVVEESDEDMCFSLFD
        AEP  KEDKKEVVEESDEDMCFSLFD
Subjt:  AEP-VKEDKKEVVEESDEDMCFSLFD

A0A6J1EDL3 60S acidic ribosomal protein P2-like3.6e-3571.2Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MKIVAAYLLA+LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAA      GGG       GAA+A VA
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AEPV EDKKEV EES+++MCFSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

A0A6J1IM66 60S acidic ribosomal protein P2-like4.7e-3572Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MKIVAAYLLA LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAA      GGG       GAA+A VA
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AEPVKEDKKEV EES+++MCFSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

A0A6P5ZTA1 60S acidic ribosomal protein P2B-like9.1e-3163.2Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MK++AAYLLA+LGGNT PS +D+K IL SVG EA+D+RIELLLS+VKGKD+ EL+ACGREK+A VP GGSA+ VAA + +GGGGG           A  A
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AE  KE+K E  EESD+DM FSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

SwissProt top hitse value%identityAlignment
O24415 60S acidic ribosomal protein P2B3.2e-2551.2Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MK++AAYLLA+LGGNT P+  D+K+IL SVG EA++E++E LL+++K KD+ E++A GRE+++ VP GG AI + A +   GGG            A  A
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
         E  KE+K E  EESDEDM FSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

P41099 60S acidic ribosomal protein P21.2e-2757.6Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MK++AA+LLA+LGGNT P+  D+K+ILASVG +A+D++IELLLSQVKGKD+ EL+A GRE++A VP GG    VA  + +GGGGG         A A  A
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
         EP KE+K E  EESDE++ FSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

P46252 60S acidic ribosomal protein P2A1.0e-2655.2Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MK VAAYLLA+L GN  PS  D+ AIL SVG E ++E++ELLLSQ+ GKD+ EL+A GREK A VPCGG  + VAA + + GG             A  A
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AE  KE+K E  EESD+DM FSLFD
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

P51407 60S acidic ribosomal protein P2-12.9e-2656Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MK+VAA+LLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGGGG              A
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AE  KE+KKE  EESD+DM FSLF+
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

Q9SLF7 60S acidic ribosomal protein P2-21.0e-2658.4Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MK+VAAYLLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGGGG       G A+   A
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AE  KE+KKE  EESD+DM FSLF+
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family7.2e-2858.4Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MK+VAAYLLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGGGG       G A+   A
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AE  KE+KKE  EESD+DM FSLF+
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

AT2G27710.2 60S acidic ribosomal protein family7.2e-2858.4Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MK+VAAYLLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGGGG       G A+   A
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AE  KE+KKE  EESD+DM FSLF+
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

AT2G27710.3 60S acidic ribosomal protein family7.2e-2858.4Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MK+VAAYLLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGGGG       G A+   A
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AE  KE+KKE  EESD+DM FSLF+
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

AT2G27720.1 60S acidic ribosomal protein family2.1e-2756Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA
        MK+VAA+LLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGGGG              A
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVA

Query:  AEPVKEDKKEVVEESDEDMCFSLFD
        AE  KE+KKE  EESD+DM FSLF+
Subjt:  AEPVKEDKKEVVEESDEDMCFSLFD

AT2G27720.3 60S acidic ribosomal protein family9.7e-2551.09Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILAS------------VGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXX
        MK+VAA+LLA+L G   P+  DIK IL S            VG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGGGG   
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILAS------------VGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXX

Query:  XXXXGAAAAVVAAEPVKEDKKEVVEESDEDMCFSLFD
                   AAE  KE+KKE  EESD+DM FSLF+
Subjt:  XXXXGAAAAVVAAEPVKEDKKEVVEESDEDMCFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCGTTGCGGCTTATTTGTTGGCTATTTTGGGCGGAAACACTCACCCTTCCATTCACGACATTAAAGCCATTCTCGCCTCTGTTGGAGTTGAGGCCGAAGATGA
AAGAATCGAGTTGCTTCTTTCACAAGTTAAGGGTAAAGATGTTGCAGAGCTTGTAGCTTGTGGGAGGGAGAAGATGGCATGTGTTCCATGTGGTGGTTCTGCCATTCCTG
TAGCTGCCGGCAGTGATAGTGGCGGGGGGGGGGGCCNNNNNNNNNNNNNNNNNNNTGGTGCTGCCGCCGCTGTTGTTGCGGCCGAGCCTGTCAAAGAGGACAAGAAAGAA
GTTGTTGAAGAATCTGATGAAGATATGTGCTTCAGTCTTTTTGATTGA
mRNA sequenceShow/hide mRNA sequence
GCTCCTTGAAGATCCAAAATCCTCTGTCTTCCATCCACATGAAGATCGTTGCGGCTTATTTGTTGGCTATTTTGGGCGGAAACACTCACCCTTCCATTCACGACATTAAA
GCCATTCTCGCCTCTGTTGGAGTTGAGGCCGAAGATGAAAGAATCGAGTTGCTTCTTTCACAAGTTAAGGGTAAAGATGTTGCAGAGCTTGTAGCTTGTGGGAGGGAGAA
GATGGCATGTGTTCCATGTGGTGGTTCTGCCATTCCTGTAGCTGCCGGCAGTGATAGTGGCGGGGGGGGGGGCCNNNNNNNNNNNNNNNNNNNTGGTGCTGCCGCCGCTG
TTGTTGCGGCCGAGCCTGTCAAAGAGGACAAGAAAGAAGTTGTTGAAGAATCTGATGAAGATATGTGCTTCAGTCTTTTTGATTGACGAGATTTATTTGTGTCCTTCACC
TTTCAAAGTTTGATCAACTTTAGTTTAGATTCATTTTAAATTGATATATATACCCTGC
Protein sequenceShow/hide protein sequence
MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGGGXXXXXXXGAAAAVVAAEPVKEDKKE
VVEESDEDMCFSLFD