; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G25590 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G25590
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAlpha-amylase
Genome locationChr6:22725498..22727436
RNA-Seq ExpressionCSPI06G25590
SyntenyCSPI06G25590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595177.1 hypothetical protein SDJN03_11730, partial [Cucurbita argyrosperma subsp. sororia]7.1e-8078.89Show/hide
Query:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        M AI++ST   IR+  VNSRP + S M SH PSLVF   NTR RQ S  S VS PC R   L PKSS+EN DI+PSED+PEDGVSLGTMKLP D DIA+F
Subjt:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEIS
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEIS
XP_004143327.1 uncharacterized protein LOC101214488 [Cucumis sativus]1.2e-10899Show/hide
Query:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        MDAISYSTNQFIRYPNVNSRPCVFS MPSHNPSLVFFASNTR+RQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
Subjt:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V
XP_008462584.1 PREDICTED: uncharacterized protein LOC103500909 [Cucumis melo]2.2e-10596.02Show/hide
Query:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        MDAISYSTNQF R+PNVNSRPCV SPMPSHNPSLVFFASNTRHRQIS FSQ SGPCHRI  LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
Subjt:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V
XP_022972616.1 uncharacterized protein LOC111471157 [Cucurbita maxima]9.3e-8078.61Show/hide
Query:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        M AI++ST   IR+  VNSRP + S M SH PSLVF   NTR RQ S  S VS PC R   L PKSS+EN DI PSED+PEDGVSLGTMKLP D DIA+F
Subjt:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+ 
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V
XP_038881940.1 uncharacterized protein LOC120073272 [Benincasa hispida]4.7e-9287.56Show/hide
Query:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        M+AIS+ST QFI Y  VNSRPC+ SPM SH PSLVF A NTRHRQIS FSQ+S PC R  KLVPKSSDEN DIVPSEDDPEDGVSLGTMKLP D DIARF
Subjt:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATA+++PIFRAIRNGRL+DQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V
TrEMBL top hitse value%identityAlignment
A0A0A0KFD4 Uncharacterized protein6.0e-10999Show/hide
Query:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        MDAISYSTNQFIRYPNVNSRPCVFS MPSHNPSLVFFASNTR+RQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
Subjt:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V
A0A1S3CH91 uncharacterized protein LOC1035009091.1e-10596.02Show/hide
Query:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        MDAISYSTNQF R+PNVNSRPCV SPMPSHNPSLVFFASNTRHRQIS FSQ SGPCHRI  LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
Subjt:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V
A0A5A7SHD0 Uncharacterized protein1.1e-10596.02Show/hide
Query:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        MDAISYSTNQF R+PNVNSRPCV SPMPSHNPSLVFFASNTRHRQIS FSQ SGPCHRI  LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
Subjt:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V
A0A6J1HDQ9 uncharacterized protein LOC1114632291.0e-7977.61Show/hide
Query:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        M  I++ST   IR+  VNSRP + S M SH PSLVF   NTR RQ S  S +S PC R   L PKSS+EN DI+PSED+PEDGVSLGTMKLP D DIA+F
Subjt:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+ 
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V
A0A6J1I6G0 uncharacterized protein LOC1114711574.5e-8078.61Show/hide
Query:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF
        M AI++ST   IR+  VNSRP + S M SH PSLVF   NTR RQ S  S VS PC R   L PKSS+EN DI PSED+PEDGVSLGTMKLP D DIA+F
Subjt:  MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+ 
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36145.1 unknown protein8.5e-4765.52Show/hide
Query:  RIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGD-GKTEVLVYIDCLVFP
        ++ + +  ++   N  V +E+  EDGVSLGTMKLP+DTD+ARF+ LLFQWANSLCQGANLPLPVPLKVD+I  G RLGFI + D GKT+V VYIDCLVF 
Subjt:  RIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGD-GKTEVLVYIDCLVFP

Query:  ATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV
         T  +  +F+A RNGR KD++PPGE RIMRSLLGALKK+VEI+RV
Subjt:  ATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCATTTCTTATTCAACAAACCAATTCATTCGCTACCCAAATGTCAATTCTCGCCCATGTGTTTTCTCTCCAATGCCCTCCCATAATCCGTCGCTGGTTTTCTT
CGCTTCGAACACTCGGCATCGCCAAATCTCCAATTTCTCCCAAGTCTCAGGTCCATGCCACAGGATTCCCAAGCTGGTGCCCAAGTCTTCAGATGAGAACAACGACATTG
TGCCCTCAGAAGATGACCCTGAAGATGGAGTATCCCTTGGGACTATGAAATTGCCTTTGGACACTGACATTGCTAGGTTTCAGGTCCTACTCTTCCAGTGGGCCAATAGT
CTTTGCCAGGGAGCTAACTTGCCACTTCCAGTGCCATTGAAGGTTGACAAAATACCCAGTGGAGTTAGACTTGGTTTTATCACAATTGGAGATGGAAAGACAGAAGTTCT
CGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGTAGTAGTCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGTGAACCGAGAA
TTATGAGAAGTCTTTTGGGTGCTTTGAAAAAATCAGTTGAAATTTCTAGAGTATGA
mRNA sequenceShow/hide mRNA sequence
AGAAAAAAAGAAAAAAAAGAAAAGAAAAATACCGACCAACCGTCAAACTCATCGCTGAAACACTATCTTCTCCTAATTTCCAATCATCTTCGTTATCTTTCTCTCAGTTC
CTTTTTCCTGTTGCTTCTTCGATATCAAATCCATCAATGGACGCCATTTCTTATTCAACAAACCAATTCATTCGCTACCCAAATGTCAATTCTCGCCCATGTGTTTTCTC
TCCAATGCCCTCCCATAATCCGTCGCTGGTTTTCTTCGCTTCGAACACTCGGCATCGCCAAATCTCCAATTTCTCCCAAGTCTCAGGTCCATGCCACAGGATTCCCAAGC
TGGTGCCCAAGTCTTCAGATGAGAACAACGACATTGTGCCCTCAGAAGATGACCCTGAAGATGGAGTATCCCTTGGGACTATGAAATTGCCTTTGGACACTGACATTGCT
AGGTTTCAGGTCCTACTCTTCCAGTGGGCCAATAGTCTTTGCCAGGGAGCTAACTTGCCACTTCCAGTGCCATTGAAGGTTGACAAAATACCCAGTGGAGTTAGACTTGG
TTTTATCACAATTGGAGATGGAAAGACAGAAGTTCTCGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGTAGTAGTCCAATTTTTCGAGCCATAAGAAATGGAC
GCTTAAAGGACCAGTCACCTCCTGGTGAACCGAGAATTATGAGAAGTCTTTTGGGTGCTTTGAAAAAATCAGTTGAAATTTCTAGAGTATGAGTTAATATTTGTCTATGT
AAATGTACCAAACTTGTCTTTTCTTCTGTCATTAGGTAATGTGAATGACTGTCGGTGAAGGTTCACTTCAATGTCTGATCTGGCTCTCATATATATATATGTTCATATCC
CTAATTCAATGTGGCTTGAATTAGAAAATTATTTCTTATGGCTTTAGTCTCATTCAGAAAACTACGATATAAGATCCTCTCAAATAAAAACAGGATGACAGCATAATGCT
GATCTTTCAGTTGTCCTTTACTGATCTAGAATGCACAACACTTGCTTTCCAATTTTTGGAATGTCCACAAATTGTTGATGGAGACGGGAAAAATGCCATCAAGAAAGCTA
AAAACAAGGAAATTTGTTTGAAGTATTATTTATTGTTCAGTGTTTGGTTATTCACACTGAAATTAAAGTTAGCTGTTGTCTTGGTGTTGGCCATTGCACTCCCAGTCCCT
GTCAAGGCAGAAAACGAGAACAACATGCTTAGAAGAGGAAAAAAATGAAGAAAGCTATGAGCAGAC
Protein sequenceShow/hide protein sequence
MDAISYSTNQFIRYPNVNSRPCVFSPMPSHNPSLVFFASNTRHRQISNFSQVSGPCHRIPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANS
LCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV