; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G25630 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G25630
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog isoform X1
Genome locationChr6:22752850..22755515
RNA-Seq ExpressionCSPI06G25630
SyntenyCSPI06G25630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604338.1 Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.6e-6198.41Show/hide
Query:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MDLI AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHA MIDTGAM
Subjt:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

XP_008462591.2 PREDICTED: vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucumis melo]5.0e-63100Show/hide
Query:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
Subjt:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022926166.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita moschata]1.8e-6097.62Show/hide
Query:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MDLI AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHA MIDTGAM
Subjt:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLC HRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022972744.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita maxima]2.3e-6097.64Show/hide
Query:  MDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA
        MDLI  AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA
Subjt:  MDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA

Query:  MFIEFVSFFIFVCTVLCFHRVSLEDDW
        MFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  MFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_023543153.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita pepo subsp. pepo]3.6e-6198.41Show/hide
Query:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MDLI AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHA MIDTGAM
Subjt:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

TrEMBL top hitse value%identityAlignment
A0A0A0KHI6 Uncharacterized protein2.4e-63100Show/hide
Query:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
Subjt:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

A0A1S3CIW0 vacuolar protein sorting-associated protein 55 homolog isoform X12.4e-63100Show/hide
Query:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
Subjt:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1EE43 vacuolar protein sorting-associated protein 55 homolog isoform X18.6e-6197.62Show/hide
Query:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MDLI AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHA MIDTGAM
Subjt:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLC HRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1HFY6 vacuolar protein sorting-associated protein 55 homolog isoform X12.5e-6097.58Show/hide
Query:  LIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFI
        +I AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFI
Subjt:  LIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFI

Query:  EFVSFFIFVCTVLCFHRVSLEDDW
        EFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  EFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1ICF8 vacuolar protein sorting-associated protein 55 homolog isoform X11.1e-6097.64Show/hide
Query:  MDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA
        MDLI  AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA
Subjt:  MDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA

Query:  MFIEFVSFFIFVCTVLCFHRVSLEDDW
        MFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  MFIEFVSFFIFVCTVLCFHRVSLEDDW

SwissProt top hitse value%identityAlignment
P47111 Vacuolar protein sorting-associated protein 551.9e-0426.55Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGS---TQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEF
        +  L+   +   LL IL+CAL++N++PL   L+++L P+P   F  G+   T   +S         A FLTG      +A+P++  H  +I   +  +  
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGS---TQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEF

Query:  VSFFIFVCTVLCF
        +   I   +++ F
Subjt:  VSFFIFVCTVLCF

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog4.6e-2755.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

Q9UUH1 Vacuolar protein sorting-associated protein 556.4e-0525.21Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQF-LISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
        + GL+ + +   +L IL+CAL+ NW+PLL  + ++L P+P L     ST    +  +    +   +F  GA+     A+PI+  +  +I T A  +  V 
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQF-LISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS

Query:  FFIFVCTVLCFHRVSLEDD
          I    +  + +  ++ +
Subjt:  FFIFVCTVLCFHRVSLEDD

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein3.2e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein3.2e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein3.2e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT3G11530.1 Vacuolar protein sorting 55 (VPS55) family protein1.2e-5487.61Show/hide
Query:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW

AT3G11530.2 Vacuolar protein sorting 55 (VPS55) family protein1.2e-5487.61Show/hide
Query:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTCATATTTGCAGTGTTAGCTGGGCTTGCGTTTATGTTTTCATCTAGCATCTTGTTACAGATTCTGGCTTGTGCACTATACAACAATTGGTGGCCTTTGTTATC
AGCTTTGATGTATGTGCTTGTTCCAATGCCTTGTTTATTTTTTGGAGGTGGGTCCACACAGTTTCTGATTAGCCGAGATGGTGGAGGATGGATAGGTGCTGCTAAGTTCT
TGACGGGCGCCTCAACTGTCGGCAGTTTGGCAATTCCTATTATCCTGAGGCATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCCTTCTTCATATTT
GTTTGCACCGTGTTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGA
mRNA sequenceShow/hide mRNA sequence
GTGGTGCTTCTTGCTGTTTGGTGAACATGGATGGATCTCATATTTGCAGTGTTAGCTGGGCTTGCGTTTATGTTTTCATCTAGCATCTTGTTACAGATTCTGGCTTGTGC
ACTATACAACAATTGGTGGCCTTTGTTATCAGCTTTGATGTATGTGCTTGTTCCAATGCCTTGTTTATTTTTTGGAGGTGGGTCCACACAGTTTCTGATTAGCCGAGATG
GTGGAGGATGGATAGGTGCTGCTAAGTTCTTGACGGGCGCCTCAACTGTCGGCAGTTTGGCAATTCCTATTATCCTGAGGCATGCTCATATGATCGACACAGGAGCCATG
TTCATAGAATTCGTTTCCTTCTTCATATTTGTTTGCACCGTGTTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGATAATTCCAGACGAATATAGTGAAGCAGAT
TTGAGTGCTGATGATTACAAAACCTTCCTTTGTTAAATTTTAATCCTCGTCTTTTGAACACACTCGATACGAGACATTGTATAACAAGAAGATACTTGTGCAGGAGGAAA
GAAACCGAGTTCGAAGTTTTCTCATATGTAAATCAATTTAATGTATGATAATAGTTATTTTCTTATGGG
Protein sequenceShow/hide protein sequence
MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIF
VCTVLCFHRVSLEDDW