; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G25800 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G25800
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscription termination factor MTEF1
Genome locationChr6:22885071..22886896
RNA-Seq ExpressionCSPI06G25800
SyntenyCSPI06G25800
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647430.1 hypothetical protein Csa_003511 [Cucumis sativus]3.6e-179100Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEQWEWE
        LKSSEMKFREKLEQWEWE
Subjt:  LKSSEMKFREKLEQWEWE

XP_011657726.1 transcription factor E2FA isoform X1 [Cucumis sativus]3.2e-17599.68Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEQ
        LKSSEMKFREKLE+
Subjt:  LKSSEMKFREKLEQ

XP_011657727.1 transcription factor E2FA isoform X2 [Cucumis sativus]3.2e-17599.68Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEQ
        LKSSEMKFREKLE+
Subjt:  LKSSEMKFREKLEQ

XP_016902903.1 PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo]7.3e-17296.54Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSRTSFIFPSKLPPR P IPPLS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFT LE RRIVGMCPE+LTSRAS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEQWEWE
        LKSSEMKFREKLE WEWE
Subjt:  LKSSEMKFREKLEQWEWE

XP_038883667.1 transcription termination factor MTEF1, chloroplastic isoform X2 [Benincasa hispida]3.4e-16994.67Show/hide
Query:  MAD-SSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDH
        MAD SSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSR +F+FPSKLPPRNP I PLSPPLPP PPH DHHSDFQEKMLFLDSIGIDFLSVIKDH
Subjt:  MAD-SSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDH

Query:  PPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHK
        PPVASASLPDIRSAVDFMTSMNFT LE RRIVGMCPEILTS AS L+PIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHK
Subjt:  PPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHK

Query:  HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
        HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
Subjt:  HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE

Query:  LLKSSEMKFREKLEQWEWE
        LLK+SEMKFR+KLE WEWE
Subjt:  LLKSSEMKFREKLEQWEWE

TrEMBL top hitse value%identityAlignment
A0A0A0KKL6 Uncharacterized protein5.3e-14486.58Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISE    
Subjt:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
                                              LFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLE
        LKSSEMKFREKLE
Subjt:  LKSSEMKFREKLE

A0A1S4E3U8 transcription termination factor MTEF1, chloroplastic3.5e-17296.54Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSRTSFIFPSKLPPR P IPPLS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFT LE RRIVGMCPE+LTSRAS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEQWEWE
        LKSSEMKFREKLE WEWE
Subjt:  LKSSEMKFREKLEQWEWE

A0A5A7SKM3 Transcription termination factor MTEF18.2e-16996.81Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSRTSFIFPSKLPPR P IPPLS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFT LE RRIVGMCPE+LTSRAS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLE
        LKSSEMKFREKLE
Subjt:  LKSSEMKFREKLE

A0A6J1HHJ6 transcription termination factor MTEF1, chloroplastic4.5e-15186.08Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        M D++LHLLSNGGF+HHSSPS LFPSL RSRTL FP + N++ +FI PSKLP R P IPPLSPPLPP P H+   S+FQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
        PVA+ASL DIRSAVDFMTSMNFT +E RRIVGMCPEILTSR S ++P+FTFLLREARVDGSDIKRVINRRPRLLACSVK++LRPT+YFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFSRRDA+IMFRRFPQLFC SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP L
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEQWE
        LK+SEMKFREKLE WE
Subjt:  LKSSEMKFREKLEQWE

A0A6J1IAF5 transcription termination factor MTEF1, chloroplastic5.7e-15486.71Show/hide
Query:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        M D++LHLLSNGGF+HHSSPS LFPSL RSRTL FP++SN++T+FI PSKLP R P IPPLSPPLPP P H+   S+FQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH
        PVA+ASL DIRSAVDFMTSMNFT +E RRIVGMCPEILTSR S ++P+FTFLLREARVDGSDIKRVINRRPRLLACSVK++LRPT+YFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFSRRDA+IMFRRFPQLFC SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP L
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEQWE
        LK+SEMKFREKLE WE
Subjt:  LKSSEMKFREKLEQWE

SwissProt top hitse value%identityAlignment
F4IHL3 Transcription termination factor MTERF2, chloroplastic7.0e-1633.71Show/hide
Query:  LREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQS-IGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIK
        L+E  +    I  ++ + P LL  S+  ++RP + FL +  G+++      +    +LL CS+  KL P + ++ +LG        M   FP L  Y++ 
Subjt:  LREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQS-IGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIK

Query:  ENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKF----REKLEQWE
        +NL PK  Y    M R L++L EFP +FS+SLE RI PRH   VE  V F L  +L  ++ +F    R+K+E+ E
Subjt:  ENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKF----REKLEQWE

F4JVI3 Transcription termination factor MTERF5, chloroplastic2.0e-2329.83Show/hide
Query:  FLDSIGI---DFLSVIKDHPPVASASLPD-IRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVK
        FL  +GI   D  +++   P +   SL D ++  + F+ ++     +  +I+   P ILT     L     FL +    +   I R++ R P +++ SV+
Subjt:  FLDSIGI---DFLSVIKDHPPVASASLPD-IRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVK

Query:  DQLRPTLYFLQSIGISE---VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFS
        D+LRPT+ + +S+ +     +H+       S+E  L P  EFF   GF   +  IM  R+  L+ +S+KEN+ PK +YF   M     EL +FP +F +S
Subjt:  DQLRPTLYFLQSIGISE---VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFS

Query:  LENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLEQ
        L+ RIKPR++     GV   L ++L  S ++F + +++
Subjt:  LENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLEQ

Q84X53 Transcription termination factor MTEF1, chloroplastic1.6e-4139.83Show/hide
Query:  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTS-RASVLIPIFTFLLREARVDGSDIKRVINRRPRLLAC
        F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +   + RI+ M P++LTS   S ++P+  FL  E  +   DI + I+R PRLL  
Subjt:  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTS-RASVLIPIFTFLLREARVDGSDIKRVINRRPRLLAC

Query:  SVKDQLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH
        SV  QLRP L FL+++G     +   ++T LL  +VE  LIP+IE+  E LGF+R +   M  R P L  YS+  NL PK+ +F+ EM  ++KELK FP 
Subjt:  SVKDQLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH

Query:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL
        YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   L
Subjt:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL

Q9FM80 Transcription termination factor MTERF9, chloroplastic6.1e-2027.05Show/hide
Query:  QEKMLFLDSIGI---DFLSVIKDHPPVASASLP-DIRSAVDFMTSMNFTTLELRRIVGMCPEILT-SRASVLIPIFTFLLREARVDGSDIKRVINRRPRL
        QE++ +L S+G+   D   ++   P +   ++  ++++ + F+  +     ++ +IV   P + + S  + L P   +L+ E  +  +D+ +V+   P++
Subjt:  QEKMLFLDSIGI---DFLSVIKDHPPVASASLP-DIRSAVDFMTSMNFTTLELRRIVGMCPEILT-SRASVLIPIFTFLLREARVDGSDIKRVINRRPRL

Query:  LACSVKDQLRPTLYFL-QSIG------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKEL
        L   +         FL + +G      +  V KH  LL  S+++  +PRI F  ++G    D L +     Q+   S+++NL+PK  Y V E+  E+  L
Subjt:  LACSVKDQLRPTLYFL-QSIG------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKEL

Query:  KEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPELLKSSE
         ++P Y S SL+ RI+PRH+  VE     KG  FPL  L+ + E
Subjt:  KEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPELLKSSE

Q9SZL6 Transcription termination factor MTERF6, chloroplastic/mitochondrial2.4e-1625.55Show/hide
Query:  SVIKDHPPVASASLPD-IRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSD-IKRVINRRPRLLACSVKDQLRPTLYFLQ-
        S I   PP+ S S+ + +   + F  ++     +L +++   P +++      + +    L    +D    I +V+ + P L+  SV  +LRPT  FL+ 
Subjt:  SVIKDHPPVASASLPD-IRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSD-IKRVINRRPRLLACSVKDQLRPTLYFLQ-

Query:  SIGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPR
        S+G+SE      V     LL   V + L P  ++ +  GF       M   +PQ+   S+K +L+P++ + V  MGR + E+  +P +F   L+ +++ R
Subjt:  SIGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPR

Query:  HQSCVEKGVCFPLPELLKSSEMKFREK
         +   +  +   L E+L  +  KF EK
Subjt:  HQSCVEKGVCFPLPELLKSSEMKFREK

Arabidopsis top hitse value%identityAlignment
AT2G03050.1 Mitochondrial transcription termination factor family protein1.2e-4239.83Show/hide
Query:  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTS-RASVLIPIFTFLLREARVDGSDIKRVINRRPRLLAC
        F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +   + RI+ M P++LTS   S ++P+  FL  E  +   DI + I+R PRLL  
Subjt:  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTS-RASVLIPIFTFLLREARVDGSDIKRVINRRPRLLAC

Query:  SVKDQLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH
        SV  QLRP L FL+++G     +   ++T LL  +VE  LIP+IE+  E LGF+R +   M  R P L  YS+  NL PK+ +F+ EM  ++KELK FP 
Subjt:  SVKDQLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH

Query:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL
        YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   L
Subjt:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL

AT2G34620.1 Mitochondrial transcription termination factor family protein9.9e-5043.93Show/hide
Query:  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRA-SVLIPIFTFLLREARVDGSDIKRVINRRPRLLACS
        +EK+L L+ +GID    +  +P + SA L  I+S + F+ S      +L RI+GMCP+ILTS   + L P+F FL  +  V  +  +RVI + PRLL  S
Subjt:  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRA-SVLIPIFTFLLREARVDGSDIKRVINRRPRLLACS

Query:  VKDQLRPTLYFLQSIGISEV----HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYF
        V+DQL+P L++LQ +G+ ++    ++   LL  SVE  LIP++ F E++GFSR +A+ M  R P LF +SI+ N +PKL+YF+ E+  +L+ LKEFP YF
Subjt:  VKDQLRPTLYFLQSIGISEV----HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYF

Query:  SFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL
        +FSLE RIKPRH   +E+G+  PL  +LKS++ +F + L
Subjt:  SFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL

AT2G36000.1 Mitochondrial transcription termination factor family protein2.5e-8553.87Show/hide
Query:  MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLHFPVLS-----NSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLS
        M   +L  LS+    +HH+     FPSL R R  +FP LS     +S +S  F      ++P IP LS     +       S   EK+++LDS+GIDFL+
Subjt:  MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLHFPVLS-----NSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLS

Query:  VIKDHPPVASASLPDIRSAVDFMTS--MNFTTLELRRIVGMCPEILTS-RASVLIPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDQLRPTLYFLQ
        +I  HPP+ S +L  + S VD+MT+  +NFT  + RR+V MCPE+LTS   S  IP+ TFLLRE  VD   D+++ + RRPRLLACSV  QLRPTLYFLQ
Subjt:  VIKDHPPVASASLPDIRSAVDFMTS--MNFTTLELRRIVGMCPEILTS-RASVLIPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDQLRPTLYFLQ

Query:  SIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE
         IGI + HKHT LLSCSV+ KL+PRI++FE LGFSRR A  MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  
Subjt:  SIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE

Query:  KGVCFPLPELLKSSEMKFREKLE
        KGV FPLP +LK++E  FR+ LE
Subjt:  KGVCFPLPELLKSSEMKFREKLE

AT2G36000.2 Mitochondrial transcription termination factor family protein2.5e-8553.87Show/hide
Query:  MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLHFPVLS-----NSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLS
        M   +L  LS+    +HH+     FPSL R R  +FP LS     +S +S  F      ++P IP LS     +       S   EK+++LDS+GIDFL+
Subjt:  MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLHFPVLS-----NSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLS

Query:  VIKDHPPVASASLPDIRSAVDFMTS--MNFTTLELRRIVGMCPEILTS-RASVLIPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDQLRPTLYFLQ
        +I  HPP+ S +L  + S VD+MT+  +NFT  + RR+V MCPE+LTS   S  IP+ TFLLRE  VD   D+++ + RRPRLLACSV  QLRPTLYFLQ
Subjt:  VIKDHPPVASASLPDIRSAVDFMTS--MNFTTLELRRIVGMCPEILTS-RASVLIPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDQLRPTLYFLQ

Query:  SIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE
         IGI + HKHT LLSCSV+ KL+PRI++FE LGFSRR A  MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  
Subjt:  SIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE

Query:  KGVCFPLPELLKSSEMKFREKLE
        KGV FPLP +LK++E  FR+ LE
Subjt:  KGVCFPLPELLKSSEMKFREKLE

AT3G18870.1 Mitochondrial transcription termination factor family protein6.0e-3133.46Show/hide
Query:  SPPLPPS--PPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVA--SASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEIL--TSRASVLIPIFTFLLRE
        SPP P S  P +    +  +E +  L S+GI     +  +P +A  +  L  I SAV+ + S   +  +  R+V +CP++   T   S L P+F FL  E
Subjt:  SPPLPPS--PPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVA--SASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEIL--TSRASVLIPIFTFLLRE

Query:  ARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPK
              + + +I   P +L   V+  LRPTL +L+ +G+  +++    +  +L+  V EKL  ++ F +++GF   +A  +  R P +F YS+++NL PK
Subjt:  ARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPK

Query:  LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREK
          + V +M REL+ELK+FP YF+FSL  RI+PRH    +K V   L  +L   + KF  K
Subjt:  LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTCGTCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTCTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCATTTCCCCGT
ACTTTCCAATTCCAGAACCTCCTTCATCTTCCCTTCCAAACTCCCTCCTCGCAACCCCGCCATTCCTCCCCTCTCCCCCCCGCTCCCTCCATCTCCCCCTCACACCGACC
ATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATTGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCTGCTTCCCTCCCCGACATC
AGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCACCCTCGAACTCCGTCGAATCGTCGGTATGTGCCCTGAGATTCTCACCTCTCGCGCTTCCGTTCTTATCCC
TATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTGAAAGATCAGCTCCGTC
CAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTACTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAG
AACTTAGGGTTTTCCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTTTGCTACAGCATAAAGGAGAATCTGGAACCGAAACTGAATTACTTTGTGGT
GGAAATGGGGAGAGAATTGAAAGAATTGAAGGAATTTCCTCACTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTT
GTTTTCCATTGCCGGAGTTGTTGAAAAGCAGCGAAATGAAATTCCGGGAGAAATTGGAGCAATGGGAGTGGGAGTGA
mRNA sequenceShow/hide mRNA sequence
GTTGAAGATAGCACTTATCCTCTTCAATTCTCTTCCTCAACCACTTCCTGGATTTCCCTCTGTTAAACCCCACAAAGCTCTCCATTAACCATGCAATGGCGGATTCGTCT
CTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTCTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCATTTCCCCGTACTTTCCAATTCCAG
AACCTCCTTCATCTTCCCTTCCAAACTCCCTCCTCGCAACCCCGCCATTCCTCCCCTCTCCCCCCCGCTCCCTCCATCTCCCCCTCACACCGACCATCACTCCGACTTTC
AGGAGAAAATGCTCTTCCTCGACTCCATTGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCTGCTTCCCTCCCCGACATCAGATCAGCCGTCGAT
TTCATGACCTCCATGAATTTCACCACCCTCGAACTCCGTCGAATCGTCGGTATGTGCCCTGAGATTCTCACCTCTCGCGCTTCCGTTCTTATCCCTATCTTCACCTTCCT
CCTCCGCGAAGCTCGAGTCGACGGTTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTGAAAGATCAGCTCCGTCCAACTCTCTACTTCC
TGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTACTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAGAACTTAGGGTTTTCC
CGACGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTTTGCTACAGCATAAAGGAGAATCTGGAACCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGA
ATTGAAAGAATTGAAGGAATTTCCTCACTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGG
AGTTGTTGAAAAGCAGCGAAATGAAATTCCGGGAGAAATTGGAGCAATGGGAGTGGGAGTGAGTAGAGTAGTGGTATGAGAATTGCACCATAATTAAATGAGCAAAAAGA
AAAGAAAAAAAAAGATACATCAAGCTTTGGCTCAAGAAATATTTAGCATCTTGCATTGGAACAAGCAGAGGCCTGCAATTTTCTTACGATATGTGTTAGCTCACTCACTC
CTTTCTCTATTGGAATTTTGTTTATGTAATCCTCTTGAGATTGGAAGTTTAAATCTTCATATTTCTACTTGTTGTACTGAAGGCACAGTAAACAGATAAAAAGGATTTAG
ACCACGTTGTTCAGTG
Protein sequenceShow/hide protein sequence
MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDI
RSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFE
NLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLEQWEWE