; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G25920 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G25920
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionIntegrase
Genome locationChr6:22959593..22960708
RNA-Seq ExpressionCSPI06G25920
SyntenyCSPI06G25920
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038926.1 integrase [Cucumis melo var. makuwa]4.0e-13765.95Show/hide
Query:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW
        EN+S  K+K+LRSDR GEYI F +F KE GI HQ T + TPQQNG+AERKNR I+E+ARSMLKAK LP++FWGDAV C VY+LNRA TKSV G+TP EAW
Subjt:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW

Query:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL
         G KP+VSHLRVFG IAYSHI ++ RGKLDDKSEKCI V ++ENSKAYRLYNP+S+K++ISRDV F E + W WN   +E ++P HV++D  + A++LE 
Subjt:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL

Query:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE
           Q +   +S  S STS+ E + R+ R+IQEIYNT+ RI D+   +FALFA VDPV F+EAIQDE WK AM+QEIDAIRRNETWEL++LP NK+ALGV+
Subjt:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE

Query:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
        W+Y+T LK +G V+KYKAR VVKGYKQ++GVDYEE+FAPVTR+ET+RL+L+LAA+N WKV+QMDVKSAFL
Subjt:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

KAA0039947.1 integrase [Cucumis melo var. makuwa]4.0e-13765.95Show/hide
Query:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW
        EN+S  K+K+LRSDR GEYI F +F KE GI HQ T + TPQQNG+AERKNR I+E+ARSMLKAK LP++FWGDAV C VY+LNRA TKSV G+TP EAW
Subjt:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW

Query:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL
         G KP+VSHLRVFG IAYSHI ++ RGKLDDKSEKCI V ++ENSKAYRLYNP+S+K++ISRDV F E + W WN   +E ++P HV++D  + A++LE 
Subjt:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL

Query:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE
           Q +   +S  S STS+ E + R+ R+IQEIYNT+ RI D+   +FALFA VDPV F+EAIQDE WK AM+QEIDAIRRNETWEL++LP NK+ALGV+
Subjt:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE

Query:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
        W+Y+T LK +G V+KYKAR VVKGYKQ++GVDYEE+FAPVTR+ET+RL+L+LAA+N WKV+QMDVKSAFL
Subjt:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

KAA0048003.1 integrase [Cucumis melo var. makuwa]4.0e-13765.95Show/hide
Query:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW
        EN+S  K+K+LRSDR GEYI F +F KE GI HQ T + TPQQNG+AERKNR I+E+ARSMLKAK LP++FWGDAV C VY+LNRA TKSV G+TP EAW
Subjt:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW

Query:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL
         G KP+VSHLRVFG IAYSHI ++ RGKLDDKSEKCI V ++ENSKAYRLYNP+S+K++ISRDV F E + W WN   +E ++P HV++D  + A++LE 
Subjt:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL

Query:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE
           Q +   +S  S STS+ E + R+ R+IQEIYNT+ RI D+   +FALFA VDPV F+EAIQDE WK AM+QEIDAIRRNETWEL++LP NK+ALGV+
Subjt:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE

Query:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
        W+Y+T LK +G V+KYKAR VVKGYKQ++GVDYEE+FAPVTR+ET+RL+L+LAA+N WKV+QMDVKSAFL
Subjt:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

KAA0057291.1 integrase [Cucumis melo var. makuwa]4.0e-13765.95Show/hide
Query:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW
        EN+S  K+K+LRSDR GEYI F +F KE GI HQ T + TPQQNG+AERKNR I+E+ARSMLKAK LP++FWGDAV C VY+LNRA TKSV G+TP EAW
Subjt:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW

Query:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL
         G KP+VSHLRVFG IAYSHI ++ RGKLDDKSEKCI V ++ENSKAYRLYNP+S+K++ISRDV F E + W WN   +E ++P HV++D  + A++LE 
Subjt:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL

Query:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE
           Q +   +S  S STS+ E + R+ R+IQEIYNT+ RI D+   +FALFA VDPV F+EAIQDE WK AM+QEIDAIRRNETWEL++LP NK+ALGV+
Subjt:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE

Query:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
        W+Y+T LK +G V+KYKAR VVKGYKQ++GVDYEE+FAPVTR+ET+RL+L+LAA+N WKV+QMDVKSAFL
Subjt:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

KAA0060377.1 integrase [Cucumis melo var. makuwa]4.0e-13765.95Show/hide
Query:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW
        EN+S  K+K+LRSDR GEYI F +F KE GI HQ T + TPQQNG+AERKNR I+E+ARSMLKAK LP++FWGDAV C VY+LNRA TKSV G+TP EAW
Subjt:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW

Query:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL
         G KP+VSHLRVFG IAYSHI ++ RGKLDDKSEKCI V ++ENSKAYRLYNP+S+K++ISRDV F E + W WN   +E ++P HV++D  + A++LE 
Subjt:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL

Query:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE
           Q +   +S  S STS+ E + R+ R+IQEIYNT+ RI D+   +FALFA VDPV F+EAIQDE WK AM+QEIDAIRRNETWEL++LP NK+ALGV+
Subjt:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE

Query:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
        W+Y+T LK +G V+KYKAR VVKGYKQ++GVDYEE+FAPVTR+ET+RL+L+LAA+N WKV+QMDVKSAFL
Subjt:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

TrEMBL top hitse value%identityAlignment
A0A5A7UDP7 Integrase1.9e-13765.95Show/hide
Query:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW
        EN+S  K+K+LRSDR GEYI F +F KE GI HQ T + TPQQNG+AERKNR I+E+ARSMLKAK LP++FWGDAV C VY+LNRA TKSV G+TP EAW
Subjt:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW

Query:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL
         G KP+VSHLRVFG IAYSHI ++ RGKLDDKSEKCI V ++ENSKAYRLYNP+S+K++ISRDV F E + W WN   +E ++P HV++D  + A++LE 
Subjt:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL

Query:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE
           Q +   +S  S STS+ E + R+ R+IQEIYNT+ RI D+   +FALFA VDPV F+EAIQDE WK AM+QEIDAIRRNETWEL++LP NK+ALGV+
Subjt:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE

Query:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
        W+Y+T LK +G V+KYKAR VVKGYKQ++GVDYEE+FAPVTR+ET+RL+L+LAA+N WKV+QMDVKSAFL
Subjt:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

A0A5A7UZJ8 Integrase1.9e-13765.95Show/hide
Query:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW
        EN+S  K+K+LRSDR GEYI F +F KE GI HQ T + TPQQNG+AERKNR I+E+ARSMLKAK LP++FWGDAV C VY+LNRA TKSV G+TP EAW
Subjt:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW

Query:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL
         G KP+VSHLRVFG IAYSHI ++ RGKLDDKSEKCI V ++ENSKAYRLYNP+S+K++ISRDV F E + W WN   +E ++P HV++D  + A++LE 
Subjt:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL

Query:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE
           Q +   +S  S STS+ E + R+ R+IQEIYNT+ RI D+   +FALFA VDPV F+EAIQDE WK AM+QEIDAIRRNETWEL++LP NK+ALGV+
Subjt:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE

Query:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
        W+Y+T LK +G V+KYKAR VVKGYKQ++GVDYEE+FAPVTR+ET+RL+L+LAA+N WKV+QMDVKSAFL
Subjt:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

A0A5D3BQ81 Integrase1.9e-13765.95Show/hide
Query:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW
        EN+S  K+K+LRSDR GEYI F +F KE GI HQ T + TPQQNG+AERKNR I+E+ARSMLKAK LP++FWGDAV C VY+LNRA TKSV G+TP EAW
Subjt:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW

Query:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL
         G KP+VSHLRVFG IAYSHI ++ RGKLDDKSEKCI V ++ENSKAYRLYNP+S+K++ISRDV F E + W WN   +E ++P HV++D  + A++LE 
Subjt:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL

Query:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE
           Q +   +S  S STS+ E + R+ R+IQEIYNT+ RI D+   +FALFA VDPV F+EAIQDE WK AM+QEIDAIRRNETWEL++LP NK+ALGV+
Subjt:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE

Query:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
        W+Y+T LK +G V+KYKAR VVKGYKQ++GVDYEE+FAPVTR+ET+RL+L+LAA+N WKV+QMDVKSAFL
Subjt:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

A0A5D3CXM6 Integrase1.9e-13765.95Show/hide
Query:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW
        EN+S  K+K+LRSDR GEYI F +F KE GI HQ T + TPQQNG+AERKNR I+E+ARSMLKAK LP++FWGDAV C VY+LNRA TKSV G+TP EAW
Subjt:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW

Query:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL
         G KP+VSHLRVFG IAYSHI ++ RGKLDDKSEKCI V ++ENSKAYRLYNP+S+K++ISRDV F E + W WN   +E ++P HV++D  + A++LE 
Subjt:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL

Query:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE
           Q +   +S  S STS+ E + R+ R+IQEIYNT+ RI D+   +FALFA VDPV F+EAIQDE WK AM+QEIDAIRRNETWEL++LP NK+ALGV+
Subjt:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE

Query:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
        W+Y+T LK +G V+KYKAR VVKGYKQ++GVDYEE+FAPVTR+ET+RL+L+LAA+N WKV+QMDVKSAFL
Subjt:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

A0A5D3E3T2 Integrase1.9e-13765.95Show/hide
Query:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW
        EN+S  K+K+LRSDR GEYI F +F KE GI HQ T + TPQQNG+AERKNR I+E+ARSMLKAK LP++FWGDAV C VY+LNRA TKSV G+TP EAW
Subjt:  ENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAW

Query:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL
         G KP+VSHLRVFG IAYSHI ++ RGKLDDKSEKCI V ++ENSKAYRLYNP+S+K++ISRDV F E + W WN   +E ++P HV++D  + A++LE 
Subjt:  SGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAP-NEDQNPLHVDMDGKKDARDLEL

Query:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE
           Q +   +S  S STS+ E + R+ R+IQEIYNT+ RI D+   +FALFA VDPV F+EAIQDE WK AM+QEIDAIRRNETWEL++LP NK+ALGV+
Subjt:  EVTQPLTLPTS--SHSTSDKETTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVE

Query:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
        W+Y+T LK +G V+KYKAR VVKGYKQ++GVDYEE+FAPVTR+ET+RL+L+LAA+N WKV+QMDVKSAFL
Subjt:  WIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.6e-4829.83Show/hide
Query:  ENESNLKLKSLRSDREGEYI--VFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSV--QGITP
        E   NLK+  L  D   EY+      F  + GI +  TV  TPQ NG++ER  R I E AR+M+   KL   FWG+AV  A YL+NR  ++++     TP
Subjt:  ENESNLKLKSLRSDREGEYI--VFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSV--QGITP

Query:  QEAWSGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEA---------------------------
         E W   KP + HLRVFG   Y HI + K+GK DDKS K IFV +  N   ++L++ +++K +++RDV  DE                            
Subjt:  QEAWSGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEA---------------------------

Query:  ----------------------------------------KLWQWNAPNEDQNPLHVDM-------------DGKKDARDLELEVTQPLTLPTSSHSTSD
                                                K+ Q   PNE +   ++               + KK  RD  L  ++    P  S  +  
Subjt:  ----------------------------------------KLWQWNAPNEDQNPLHVDM-------------DGKKDARDLELEVTQPLTLPTSSHSTSD

Query:  KE-------TTSRKTRNIQEIYNTSRRILDEEHVDF---------------ALFANVDPVNFEE-AIQDE--NWKDAMNQEIDAIRRNETWELVKLPENK
         E           K   I+ I   S R+  +  + +                +F +V P +F+E   +D+  +W++A+N E++A + N TW + K PENK
Subjt:  KE-------TTSRKTRNIQEIYNTSRRILDEEHVDF---------------ALFANVDPVNFEE-AIQDE--NWKDAMNQEIDAIRRNETWELVKLPENK

Query:  RALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
          +   W++     + G   +YKAR V +G+ QK+ +DYEE FAPV R+ + R +L+L  +   KVHQMDVK+AFL
Subjt:  RALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.5e-6737.1Show/hide
Query:  MVENESNLKLKSLRSDREGEYI--VFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITP
        +VE E+  KLK LRSD  GEY    F ++   +GI+H+KTV  TPQ NG+AER NR IVE  RSML+  KLP  FWG+AV  A YL+NR+ +  +    P
Subjt:  MVENESNLKLKSLRSDREGEYI--VFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITP

Query:  QEAWSGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAPNEDQNPLHVDMDGKKDARD
        +  W+  + + SHL+VFGC A++H+  E+R KLDDKS  CIF+ + +    YRL++P+ KKV+ SRDV F E+++               DM  K     
Subjt:  QEAWSGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAPNEDQNPLHVDMDGKKDARD

Query:  LELEVTQPLTL--PTSSHSTSDK------------ETTSRKTRNIQEIYNTSR--------RILDEEHVDFALFANVDPVNFEEAIQDENWKD-------
        +   VT P T   PTS+ ST+D+            E   +    ++E+ + ++        R  +   V+   + + + V   +  + E+ K+       
Subjt:  LELEVTQPLTL--PTSSHSTSDK------------ETTSRKTRNIQEIYNTSR--------RILDEEHVDFALFANVDPVNFEEAIQDENWKD-------

Query:  -----AMNQEIDAIRRNETWELVKLPENKRALGVEWIYKTNLKQNGEVQ--KYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQM
             AM +E++++++N T++LV+LP+ KR L  +W++K  LK++G+ +  +YKAR VVKG++QK G+D++E+F+PV ++ ++R +L+LAA  + +V Q+
Subjt:  -----AMNQEIDAIRRNETWELVKLPENKRALGVEWIYKTNLKQNGEVQ--KYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQM

Query:  DVKSAFL
        DVK+AFL
Subjt:  DVKSAFL

P92520 Uncharacterized mitochondrial protein AtMg008201.6e-1639.81Show/hide
Query:  DPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAA
        +P +   A++D  W  AM +E+DA+ RN+TW LV  P N+  LG +W++KT L  +G + + KAR V KG+ Q+ G+ + E ++PV R  T+R +L +A 
Subjt:  DPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAA

Query:  KNE
        + E
Subjt:  KNE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.3e-4224.85Show/hide
Query:  MVENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQE
        ++EN    ++ +  SD  GE++   ++  ++GI H  +   TP+ NG++ERK+R IVE   ++L    +P  +W  A   AVYL+NR  T  +Q  +P +
Subjt:  MVENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQE

Query:  AWSGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDE----------------------AKLWQ---
           G  P    LRVFGC  Y  +    + KLDDKS +C+F+ ++    AY   +  + ++ ISR V+FDE                      + +W    
Subjt:  AWSGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDE----------------------AKLWQ---

Query:  -----------------------------------------------------------------WNAPNEDQNPLHVDMDGKKD--ARDLELEVTQPLT
                                                                            P + Q   H   +  ++    +   ++ Q L+
Subjt:  -----------------------------------------------------------------WNAPNEDQNPLHVDMDGKKD--ARDLELEVTQPLT

Query:  LPTSSHSTSDKETTSRKTRN---------------IQEIYNTSRRILDEEH------------------VDFALFANVDPVNFEEAIQDENWKDAMNQEI
         P  S S+S   TTS  + +               + +I N + +     H                  +  +L A  +P    +A++DE W++AM  EI
Subjt:  LPTSSHSTSDKETTSRKTRN---------------IQEIYNTSRRILDEEH------------------VDFALFANVDPVNFEEAIQDENWKDAMNQEI

Query:  DAIRRNETWELV-KLPENKRALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
        +A   N TW+LV   P +   +G  WI+      +G + +YKAR V KGY Q+ G+DY E F+PV +  ++R++L +A    W + Q+DV +AFL
Subjt:  DAIRRNETWELV-KLPENKRALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.3e-4126.45Show/hide
Query:  MVENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQE
        +VEN    ++ +L SD  GE++V  D+L ++GI H  +   TP+ NG++ERK+R IVE+  ++L    +P  +W  A + AVYL+NR  T  +Q  +P +
Subjt:  MVENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQE

Query:  AWSGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDE---------------AKLWQWNAPNEDQN-
           G  P    L+VFGC  Y  +    R KL+DKS++C F+ ++    AY   +  + ++  SR V+FDE                +    +APN   + 
Subjt:  AWSGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDE---------------AKLWQWNAPNEDQN-

Query:  -----PL----------HVDMDGKKDARDLELEVTQ----------------------------------------------------------------
             PL          H+D   +  +    L  TQ                                                                
Subjt:  -----PL----------HVDMDGKKDARDLELEVTQ----------------------------------------------------------------

Query:  ----PLT---LPTSSHSTSDKETTSRKTR-----------------NIQEIYNTS----------RRILDEEHVDFALFANVDPVNFEEAIQDENWKDAM
            P++   +PT S S S+  + S  +                  N Q   NT           R+   +     +L AN +P    +A++D+ W+ AM
Subjt:  ----PLT---LPTSSHSTSDKETTSRKTR-----------------NIQEIYNTS----------RRILDEEHVDFALFANVDPVNFEEAIQDENWKDAM

Query:  NQEIDAIRRNETWELV-KLPENKRALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL
          EI+A   N TW+LV   P +   +G  WI+      +G + +YKAR V KGY Q+ G+DY E F+PV +  ++R++L +A    W + Q+DV +AFL
Subjt:  NQEIDAIRRNETWELV-KLPENKRALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.3e-2441.38Show/hide
Query:  DPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAA
        +P  + EA +   W  AM+ EI A+    TWE+  LP NK+ +G +W+YK     +G +++YKAR V KGY Q+ G+D+ E F+PV +L +V+L+LA++A
Subjt:  DPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAA

Query:  KNEWKVHQMDVKSAFL
           + +HQ+D+ +AFL
Subjt:  KNEWKVHQMDVKSAFL

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-1140Show/hide
Query:  NRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAWSGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEK
        NR I+E  RSML    LP  F  DA   AV+++N+  + ++    P E W    PT S+LR FGC+AY H  +   GKL  +++K
Subjt:  NRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAWSGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEK

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.2e-1739.81Show/hide
Query:  DPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAA
        +P +   A++D  W  AM +E+DA+ RN+TW LV  P N+  LG +W++KT L  +G + + KAR V KG+ Q+ G+ + E ++PV R  T+R +L +A 
Subjt:  DPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGVDYEEVFAPVTRLETVRLLLALAA

Query:  KNE
        + E
Subjt:  KNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAAAATGAAAGTAACTTGAAATTGAAATCATTGCGTTCGGATCGTGAAGGAGAATATATTGTTTTTGCAGATTTCTTGAAGGAAAATGGAATCAAGCACCAGAA
GACTGTTCAAAGAACTCCTCAACAAAACGGAATTGCAGAGAGGAAAAATAGAATAATAGTGGAACTTGCAAGAAGTATGTTGAAGGCAAAGAAACTTCCTGATCAATTTT
GGGGAGACGCAGTAACTTGTGCTGTTTATCTCCTAAATAGAGCTTCAACGAAAAGTGTGCAAGGTATTACTCCTCAAGAAGCATGGAGCGGATTGAAACCAACCGTTAGT
CACCTAAGAGTGTTTGGGTGCATTGCTTACTCTCACATTTCAGATGAGAAAAGAGGTAAGCTAGATGATAAATCAGAAAAATGCATTTTTGTTCGGCACAATGAGAACTC
CAAGGCCTACAGACTATACAACCCGATAAGTAAGAAAGTTGTTATTAGTCGAGATGTCAAGTTCGATGAAGCAAAATTGTGGCAATGGAATGCACCAAATGAAGACCAAA
ATCCATTACATGTTGATATGGATGGAAAAAAAGATGCTCGAGACTTGGAGCTTGAAGTAACTCAACCACTGACTTTACCTACTTCATCACACTCCACAAGTGATAAAGAA
ACTACTTCAAGGAAGACCAGAAATATTCAAGAGATCTATAATACTTCAAGAAGGATACTAGATGAAGAACATGTTGATTTTGCTTTATTTGCAAATGTTGATCCTGTAAA
CTTTGAAGAAGCAATTCAAGATGAAAATTGGAAAGATGCAATGAATCAAGAGATTGATGCAATAAGAAGAAACGAGACATGGGAGTTAGTAAAATTACCAGAAAATAAAA
GGGCTCTTGGAGTCGAATGGATCTATAAAACAAATCTAAAGCAAAATGGAGAAGTGCAAAAATACAAAGCCAGATTCGTTGTAAAAGGTTACAAACAAAAGTTTGGTGTG
GATTATGAAGAAGTTTTTGCACCGGTAACTCGCTTGGAGACTGTTCGTTTGTTGTTAGCCCTTGCAGCAAAAAATGAATGGAAAGTTCATCAAATGGATGTAAAGTCAGC
ATTCCTGTTCTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAAAATGAAAGTAACTTGAAATTGAAATCATTGCGTTCGGATCGTGAAGGAGAATATATTGTTTTTGCAGATTTCTTGAAGGAAAATGGAATCAAGCACCAGAA
GACTGTTCAAAGAACTCCTCAACAAAACGGAATTGCAGAGAGGAAAAATAGAATAATAGTGGAACTTGCAAGAAGTATGTTGAAGGCAAAGAAACTTCCTGATCAATTTT
GGGGAGACGCAGTAACTTGTGCTGTTTATCTCCTAAATAGAGCTTCAACGAAAAGTGTGCAAGGTATTACTCCTCAAGAAGCATGGAGCGGATTGAAACCAACCGTTAGT
CACCTAAGAGTGTTTGGGTGCATTGCTTACTCTCACATTTCAGATGAGAAAAGAGGTAAGCTAGATGATAAATCAGAAAAATGCATTTTTGTTCGGCACAATGAGAACTC
CAAGGCCTACAGACTATACAACCCGATAAGTAAGAAAGTTGTTATTAGTCGAGATGTCAAGTTCGATGAAGCAAAATTGTGGCAATGGAATGCACCAAATGAAGACCAAA
ATCCATTACATGTTGATATGGATGGAAAAAAAGATGCTCGAGACTTGGAGCTTGAAGTAACTCAACCACTGACTTTACCTACTTCATCACACTCCACAAGTGATAAAGAA
ACTACTTCAAGGAAGACCAGAAATATTCAAGAGATCTATAATACTTCAAGAAGGATACTAGATGAAGAACATGTTGATTTTGCTTTATTTGCAAATGTTGATCCTGTAAA
CTTTGAAGAAGCAATTCAAGATGAAAATTGGAAAGATGCAATGAATCAAGAGATTGATGCAATAAGAAGAAACGAGACATGGGAGTTAGTAAAATTACCAGAAAATAAAA
GGGCTCTTGGAGTCGAATGGATCTATAAAACAAATCTAAAGCAAAATGGAGAAGTGCAAAAATACAAAGCCAGATTCGTTGTAAAAGGTTACAAACAAAAGTTTGGTGTG
GATTATGAAGAAGTTTTTGCACCGGTAACTCGCTTGGAGACTGTTCGTTTGTTGTTAGCCCTTGCAGCAAAAAATGAATGGAAAGTTCATCAAATGGATGTAAAGTCAGC
ATTCCTGTTCTCTTAG
Protein sequenceShow/hide protein sequence
MVENESNLKLKSLRSDREGEYIVFADFLKENGIKHQKTVQRTPQQNGIAERKNRIIVELARSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITPQEAWSGLKPTVS
HLRVFGCIAYSHISDEKRGKLDDKSEKCIFVRHNENSKAYRLYNPISKKVVISRDVKFDEAKLWQWNAPNEDQNPLHVDMDGKKDARDLELEVTQPLTLPTSSHSTSDKE
TTSRKTRNIQEIYNTSRRILDEEHVDFALFANVDPVNFEEAIQDENWKDAMNQEIDAIRRNETWELVKLPENKRALGVEWIYKTNLKQNGEVQKYKARFVVKGYKQKFGV
DYEEVFAPVTRLETVRLLLALAAKNEWKVHQMDVKSAFLFS