CuGenDBv2

Gene ID	CSPI06G25930
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Integrase
Genome location	Chr6:22960834..22962347
RNA-Seq Expression	CSPI06G25930
Synteny	CSPI06G25930
Gene Ontology terms	GO:0090304 - nucleic acid metabolic process (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0032729.1 integrase [Cucumis melo var. makuwa]

4.3e-99

56.86

Show/hide

Query:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL
        E +ST   AKAAWD L++ Y+GE+KVK++RLQ L++EFD I+MK++ETI+EFFNR+L+IVN LRSNGE + DQR+VEKILRSM R++EHIVVAIEESKDL
Subjt:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL

Query:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------
        STLSINS MGSLQSHELRLK FD NP EE F MQ+S+RG S GRRGG G RG GR+                                            
Subjt:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------

Query:  VVTNTERYGHFQADCWSKKANSNQAETTLMH-EQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGD
           N  +YGHFQADCW+ K          MH EQ  ND+G+LFLT +VQ +  +  WYLDSGCSNHMTG + IF++LDES Q+ VKTGDN  L+VKG+GD
Subjt:  VVTNTERYGHFQADCWSKKANSNQAETTLMH-EQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGD

Query:  ILVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK
        ILVKTK+G KR+T+V+YV GLKHNLLS+GQLL RG +V F+ +IC I+ + G LI K
Subjt:  ILVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK

KAA0051601.1 integrase [Cucumis melo var. makuwa]

4.7e-98

56.18

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Query:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL
        E +ST   AKAAWD L++ Y+GE+KVK++RLQ L++EFD I+MK++ETI+EFFNR+L+IVN LRSNGE + DQR+VEKILRSM R++EHIVVAIEESKDL
Subjt:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL

Query:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------
        STLSINSLMGSLQSHELRLK FD NP EEAF MQ+S+RG S GRRGG G RG GR+                                            
Subjt:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------

Query:  VVTNTERYGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDI
           N  +YGHFQA+CW+ K         +  EQ   D+G+LFL  +VQ +  +  WYLDSGCSNHMTG + IF++LDES Q+ VKTGDN  L+VKG+GDI
Subjt:  VVTNTERYGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDI

Query:  LVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK
        LVKTK+G KR+T+V+YV GLKHNLLS+GQLL RG +V F+ +IC I+ + G LI K
Subjt:  LVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK

KAA0053129.1 integrase [Cucumis melo var. makuwa]

8.6e-100

57.02

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Query:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL
        E +ST   AKAAWD L++ Y+GE+KVK++RLQ L++EFD I+MK++ETI+EFFNR+L+IVN LRSNGE + DQR+VEKILRSM R++EHIVVAIEESKDL
Subjt:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL

Query:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------
        STLSINSLMGSLQSHELRLK FD NP EEAF MQ+S+RG S GRRGG G RG GR+                                            
Subjt:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------

Query:  VVTNTERYGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDI
           N  +YGHFQADCW+ K     A   +  EQ  ND+G+LFL  +VQ +  +  WYLDSGCSNHMTG + IF++LDES Q+ VKTGDN  L+VKG+GDI
Subjt:  VVTNTERYGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDI

Query:  LVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK
        LVKTK+G KR+T+V+YV GLKHNLLS+GQLL RG +V F+ +IC I+ + G LI K
Subjt:  LVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK

KAA0055928.1 integrase [Cucumis melo var. makuwa]

3.6e-98

56.57

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Query:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL
        E +ST   AKAAWD L++ Y+GE+KVK++RLQ L++EFD I+MK++E I+EFFNR+L+IVN LRSNGE + DQR+VEKILRSM R++EHI+VAIEESKDL
Subjt:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL

Query:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGR------------SNVVTNTER------------------------
        ST SINSLMGSLQSHELRLK FD +P EEAF MQ+S+RG S GRRGG G RG+GR            S  +++  R                        
Subjt:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGR------------SNVVTNTER------------------------

Query:  -YGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDILVKTKR
         YGHFQADCW+ K         +  EQ  ND+G+LFL  +VQ +  +  WYLDSGCSNHMTG ++IF++LDES Q+ VKTGDN  L+VKG+GDILVKTK+
Subjt:  -YGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDILVKTKR

Query:  GAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK
        G KR+T+V+YV GLKHNLLS+GQLL +G +V F+ +IC I+ + G LI K
Subjt:  GAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK

TYK28133.1 integrase [Cucumis melo var. makuwa]

3.6e-98

56.57

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Query:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL
        E +ST   AKAAWD L++ Y+GE+KVK++RLQ L++EFD I+MK++E I+EFFNR+L+IVN LRSNGE + DQR+VEKILRSM R++EHI+VAIEESKDL
Subjt:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL

Query:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGR------------SNVVTNTER------------------------
        ST SINSLMGSLQSHELRLK FD +P EEAF MQ+S+RG S GRRGG G RG+GR            S  +++  R                        
Subjt:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGR------------SNVVTNTER------------------------

Query:  -YGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDILVKTKR
         YGHFQADCW+ K         +  EQ  ND+G+LFL  +VQ +  +  WYLDSGCSNHMTG ++IF++LDES Q+ VKTGDN  L+VKG+GDILVKTK+
Subjt:  -YGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDILVKTKR

Query:  GAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK
        G KR+T+V+YV GLKHNLLS+GQLL +G +V F+ +IC I+ + G LI K
Subjt:  GAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SUA3 Integrase

2.1e-99

56.86

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Query:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL
        E +ST   AKAAWD L++ Y+GE+KVK++RLQ L++EFD I+MK++ETI+EFFNR+L+IVN LRSNGE + DQR+VEKILRSM R++EHIVVAIEESKDL
Subjt:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL

Query:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------
        STLSINS MGSLQSHELRLK FD NP EE F MQ+S+RG S GRRGG G RG GR+                                            
Subjt:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------

Query:  VVTNTERYGHFQADCWSKKANSNQAETTLMH-EQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGD
           N  +YGHFQADCW+ K          MH EQ  ND+G+LFLT +VQ +  +  WYLDSGCSNHMTG + IF++LDES Q+ VKTGDN  L+VKG+GD
Subjt:  VVTNTERYGHFQADCWSKKANSNQAETTLMH-EQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGD

Query:  ILVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK
        ILVKTK+G KR+T+V+YV GLKHNLLS+GQLL RG +V F+ +IC I+ + G LI K
Subjt:  ILVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK

A0A5A7UDJ2 Integrase

2.3e-98

56.18

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Query:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL
        E +ST   AKAAWD L++ Y+GE+KVK++RLQ L++EFD I+MK++ETI+EFFNR+L+IVN LRSNGE + DQR+VEKILRSM R++EHIVVAIEESKDL
Subjt:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL

Query:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------
        STLSINSLMGSLQSHELRLK FD NP EEAF MQ+S+RG S GRRGG G RG GR+                                            
Subjt:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------

Query:  VVTNTERYGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDI
           N  +YGHFQA+CW+ K         +  EQ   D+G+LFL  +VQ +  +  WYLDSGCSNHMTG + IF++LDES Q+ VKTGDN  L+VKG+GDI
Subjt:  VVTNTERYGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDI

Query:  LVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK
        LVKTK+G KR+T+V+YV GLKHNLLS+GQLL RG +V F+ +IC I+ + G LI K
Subjt:  LVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK

A0A5A7UI36 Integrase

4.2e-100

57.02

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Query:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL
        E +ST   AKAAWD L++ Y+GE+KVK++RLQ L++EFD I+MK++ETI+EFFNR+L+IVN LRSNGE + DQR+VEKILRSM R++EHIVVAIEESKDL
Subjt:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL

Query:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------
        STLSINSLMGSLQSHELRLK FD NP EEAF MQ+S+RG S GRRGG G RG GR+                                            
Subjt:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSN-------------------------------------------

Query:  VVTNTERYGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDI
           N  +YGHFQADCW+ K     A   +  EQ  ND+G+LFL  +VQ +  +  WYLDSGCSNHMTG + IF++LDES Q+ VKTGDN  L+VKG+GDI
Subjt:  VVTNTERYGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDI

Query:  LVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK
        LVKTK+G KR+T+V+YV GLKHNLLS+GQLL RG +V F+ +IC I+ + G LI K
Subjt:  LVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK

A0A5A7ULH0 Integrase

1.8e-98

56.57

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Query:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL
        E +ST   AKAAWD L++ Y+GE+KVK++RLQ L++EFD I+MK++E I+EFFNR+L+IVN LRSNGE + DQR+VEKILRSM R++EHI+VAIEESKDL
Subjt:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL

Query:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGR------------SNVVTNTER------------------------
        ST SINSLMGSLQSHELRLK FD +P EEAF MQ+S+RG S GRRGG G RG+GR            S  +++  R                        
Subjt:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGR------------SNVVTNTER------------------------

Query:  -YGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDILVKTKR
         YGHFQADCW+ K         +  EQ  ND+G+LFL  +VQ +  +  WYLDSGCSNHMTG ++IF++LDES Q+ VKTGDN  L+VKG+GDILVKTK+
Subjt:  -YGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDILVKTKR

Query:  GAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK
        G KR+T+V+YV GLKHNLLS+GQLL +G +V F+ +IC I+ + G LI K
Subjt:  GAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK

A0A5D3DWR8 Integrase

1.8e-98

56.57

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Query:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL
        E +ST   AKAAWD L++ Y+GE+KVK++RLQ L++EFD I+MK++E I+EFFNR+L+IVN LRSNGE + DQR+VEKILRSM R++EHI+VAIEESKDL
Subjt:  ENVST---AKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDL

Query:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGR------------SNVVTNTER------------------------
        ST SINSLMGSLQSHELRLK FD +P EEAF MQ+S+RG S GRRGG G RG+GR            S  +++  R                        
Subjt:  STLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGR------------SNVVTNTER------------------------

Query:  -YGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDILVKTKR
         YGHFQADCW+ K         +  EQ  ND+G+LFL  +VQ +  +  WYLDSGCSNHMTG ++IF++LDES Q+ VKTGDN  L+VKG+GDILVKTK+
Subjt:  -YGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDILVKTKR

Query:  GAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK
        G KR+T+V+YV GLKHNLLS+GQLL +G +V F+ +IC I+ + G LI K
Subjt:  GAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G20980.1 Gag-Pol-related retrotransposon family protein

1.7e-08

41.11

Show/hide

Query:  KEIWYLDSGCSNHMTGRKDIFISLDESHQNVVK--TGDNK---MLEVKGKGDILVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEV
        + IW + S  SNHMT     F +LD S +  VK  +GD     +  V+G GD+   T  G K I +V YV G++ N LSV QL   G EV
Subjt:  KEIWYLDSGCSNHMTGRKDIFISLDESHQNVVK--TGDNK---MLEVKGKGDILVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEV

AT3G21000.1 Gag-Pol-related retrotransposon family protein

4.8e-08

22.22

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Query:  NVSTAKAAWDALQNLYEGEEKVKLVRLQ-----TLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKD
        + S+AK  WD L+   +G E+  + RL+      L+ + + ++M D E+   + ++ L I+ +L        D  I + +  +++  ++ +   +EE  D
Subjt:  NVSTAKAAWDALQNLYEGEEKVKLVRLQ-----TLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKD

Query:  LSTLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRG-GRGGRGNGRSNVVTNTERYGHFQADCWSKKANSNQAETTLMHEQSNNDQGLL
        +  ++  SL+          ++ +S+  E  F +    R +S   +  G   + N             H Q DC   + ++++ E     ++   D  L 
Subjt:  LSTLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRG-GRGGRGNGRSNVVTNTERYGHFQADCWSKKANSNQAETTLMHEQSNNDQGLL

Query:  FLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDILVKTKRGAKR-ITDVYYVSGLKHNLLSVGQLLLRGHEV
         +     ++   +IW +      +MT     F +LD + +  V T D  +L V+GKGD+ ++ K G K+ I +V +V GL  N+LS G+++ + + +
Subjt:  FLTLNVQQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDILVKTKRGAKR-ITDVYYVSGLKHNLLSVGQLLLRGHEV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGATATCAAGATCTTTGGGATATTGTTGACATTGGATATTTCAGAGCCAGAAAGTGAGAATGTCTCTACTGCTAAAGCAGCATGGGATGCATTGCAAAATTTGTATGA
AGGAGAAGAAAAGGTAAAATTGGTTCGATTACAAACACTTAAAGCTGAATTTGATACAATTCGAATGAAAGATTCTGAAACTATTAAAGAATTTTTTAACCGTGTGCTCT
TAATTGTTAATCAATTGAGATCAAATGGAGAAACAATTGAAGATCAAAGGATTGTTGAGAAGATTCTTAGAAGCATGACTAGAAGATATGAGCATATTGTTGTAGCAATT
GAAGAATCCAAAGATTTGTCAACTCTCTCTATAAATAGCTTAATGGGATCTCTTCAATCTCATGAGCTCAGATTGAAGATGTTTGATTCTAATCCTTCAGAAGAAGCTTT
TCATATGCAGTCCTCCTATAGAGGTCGATCCAATGGAAGAAGAGGTGGACGTGGTGGTAGAGGCAATGGACGATCCAACGTTGTAACAAATACAGAACGTTATGGACATT
TTCAAGCAGACTGTTGGTCTAAGAAGGCTAATTCTAATCAAGCAGAAACCACGCTAATGCATGAACAATCAAATAATGATCAAGGTCTTCTCTTCCTCACTCTCAATGTT
CAACAATCAAGCACTAAAGAAATATGGTATCTTGATAGTGGTTGTAGTAACCACATGACAGGAAGAAAGGATATTTTTATATCTTTAGATGAATCTCATCAAAATGTAGT
GAAGACTGGTGACAACAAGATGCTTGAAGTCAAAGGAAAAGGAGATATTCTTGTCAAGACAAAAAGGGGAGCAAAAAGAATTACTGATGTGTATTATGTTTCAGGTCTCA
AACACAATCTTTTAAGTGTTGGCCAACTTCTCCTAAGAGGACATGAGGTTATCTTTAAAGATAACATATGTGAGATTAGAACCAAGAATGGAGATCTCATAACGAAGGAA
GATCAACTCTGTGAAGCATGTGTTTTGCATCATCGTCATTTCCGACTGGAGGTTCTTGGAGAGCATCAAAACCACTCGAGCTTGTTCATACAGACTTATGTGGACCTATG
A

mRNA sequence

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Protein sequence

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MDIKIFGILLTLDISEPESENVSTAKAAWDALQNLYEGEEKVKLVRLQTLKAEFDTIRMKDSETIKEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAI
EESKDLSTLSINSLMGSLQSHELRLKMFDSNPSEEAFHMQSSYRGRSNGRRGGRGGRGNGRSNVVTNTERYGHFQADCWSKKANSNQAETTLMHEQSNNDQGLLFLTLNV
QQSSTKEIWYLDSGCSNHMTGRKDIFISLDESHQNVVKTGDNKMLEVKGKGDILVKTKRGAKRITDVYYVSGLKHNLLSVGQLLLRGHEVIFKDNICEIRTKNGDLITKE
DQLCEACVLHHRHFRLEVLGEHQNHSSLFIQTYVDL

CSPI06G25930 (gene) of Cucumber (PI 183967) v1 genome