; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G26200 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G26200
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationChr6:23169641..23171270
RNA-Seq ExpressionCSPI06G26200
SyntenyCSPI06G26200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039770.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.3e-6737.25Show/hide
Query:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF
        QRRS IS+I +     C+T+  I K F+DHF +IY    +   W IDN  W+PI      +LC +F+ +EI+ AL  F  NKS GPDGFTMEF K TW+ 
Subjt:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF

Query:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------
         KE IL IF DFH NCIIN  VN T IALIAKK+ C  P+DYRPISLTT                       ENQ+AFV+GRQI DAIL+ANEA      
Subjt:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------

Query:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV
                      AF K     +  +L+    P                  +    P  K+ P                                 K V
Subjt:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV

Query:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT
           G  NLTHLLFADDILLF+ED+E +I N++N + LF+LA                                          VPLGGK  ++ FW    
Subjt:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT

Query:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ
        +K+ KK+ +WKY+ LS+G KITLIK++LAS+P Y +S+FK P  + K +++
Subjt:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ

KAA0041367.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.5e-6737.47Show/hide
Query:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF
        QRRS IS+I +     C+T+  I K F+DHF +IY    +   W IDN  W+PI  T   +LC  F+ +EI+ AL  F  NKS GPDGFTMEF K TW+ 
Subjt:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF

Query:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------
         KE IL IF DFH NCIIN  VN T IALIAKK+ C  P+DYRPISLTT                       ENQ+AFV+GRQI DAIL+ANEA      
Subjt:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------

Query:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV
                      AF K     +  +L+    P                  +    P  K+ P                                 K V
Subjt:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV

Query:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT
           G  NLTHLLFADDILLF+ED+E +I N++N + LF+LA                                          VPLGGK  ++ FW    
Subjt:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT

Query:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ
        +K+ KK+ +WKY+ LS+G KITLIK++LAS+P Y +S+FK P  + K +++
Subjt:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.0e-6035.32Show/hide
Query:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYTKKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNFT
        Q++  IS +       C  D DI   FI HF EIYT  K    FIDN  W PI  T+   L K F+  EI+  LK+F KNK+ GPDGFTM+FL+ +W+F 
Subjt:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYTKKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNFT

Query:  KENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA-------
        K NI +IF DFH N  IN +VN T I LIAKKD C   SD+RPISLTT                       E Q+AFV+GRQIT+AILIANEA       
Subjt:  KENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA-------

Query:  -------------AFHKNGVNGLKLVLLVFN-TPS----------------LSTEDPEVKLNP------------------------------QEASGKR
                     AF K     +  +L+  N +P                 L    P  ++ P                              ++     
Subjt:  -------------AFHKNGVNGLKLVLLVFN-TPS----------------LSTEDPEVKLNP------------------------------QEASGKR

Query:  VSFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSET
        V+F    NLTH+LFADDIL+F+ED E+ ++N++  L LFE A                                          +PLGGK +S +FW   
Subjt:  VSFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSET

Query:  TKKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQY
         +K+QKK+++WKY+ LS+G +ITLI +TL S+P Y +SVFK P    + ++ Y
Subjt:  TKKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQY

TYK29463.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.1e-6137.13Show/hide
Query:  SFISSIYTAQDALCTTDRDIEKTFIDHFGEIYTKKKRD-LWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNFTKE
        S IS+I +     CTT+ +I K F+DHF  IY K   D LW I+N  W+PI  +   +LC  FS +EI++AL  F  NKS G  GFTMEF K TW   K+
Subjt:  SFISSIYTAQDALCTTDRDIEKTFIDHFGEIYTKKKRD-LWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNFTKE

Query:  NILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA---------
        +I  IF DF+ NCIIN  VN T IALIAKK+ C  P+DYRPISLTT                       ENQ+AFV+GRQI DAIL+ANEA         
Subjt:  NILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA---------

Query:  -----------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRVSFN
                   AF K     +  VL+    P                  +    P  K+ P                               + K V   
Subjt:  -----------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRVSFN

Query:  GKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETTKKL
           NLTHLLFADDILLF+ED+E ++ N++N + LF+LA                                          VPLGGK  ++ FW     K+
Subjt:  GKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETTKKL

Query:  QKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPP
         KK+ +WKY+ LS+G KITLIK+TLAS+P Y ++VFK P
Subjt:  QKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPP

XP_016902461.1 PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo]4.4e-6737.25Show/hide
Query:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF
        QRRS IS+I +     C+T+  I K F+DHF +IY    +   W IDN  W+PI      +LC +F+ +EI+ AL  F  NKS GPDGFTMEF K TW+ 
Subjt:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF

Query:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------
         KE IL IF DFH NCIIN  VN T IALIAKK+ C  P+DYRPISLTT                       ENQ+AFV+GRQI DAIL+ANEA      
Subjt:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------

Query:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV
                      AF K     +  +L+    P                  +    P  K+ P                                 K V
Subjt:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV

Query:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT
           G  NLTHLLFADDILLF+ED+E +I N++N + LF+LA                                          VPLGGK  ++ FW    
Subjt:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT

Query:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ
        +K+ KK+ +WKY+ LS+G KITLIK++LAS+P Y +S+FK P  + K +++
Subjt:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ

TrEMBL top hitse value%identityAlignment
A0A1S4E2K5 LINE-1 retrotransposable element ORF2 protein2.1e-6737.25Show/hide
Query:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF
        QRRS IS+I +     C+T+  I K F+DHF +IY    +   W IDN  W+PI      +LC +F+ +EI+ AL  F  NKS GPDGFTMEF K TW+ 
Subjt:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF

Query:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------
         KE IL IF DFH NCIIN  VN T IALIAKK+ C  P+DYRPISLTT                       ENQ+AFV+GRQI DAIL+ANEA      
Subjt:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------

Query:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV
                      AF K     +  +L+    P                  +    P  K+ P                                 K V
Subjt:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV

Query:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT
           G  NLTHLLFADDILLF+ED+E +I N++N + LF+LA                                          VPLGGK  ++ FW    
Subjt:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT

Query:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ
        +K+ KK+ +WKY+ LS+G KITLIK++LAS+P Y +S+FK P  + K +++
Subjt:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ

A0A5A7TI93 LINE-1 retrotransposable element ORF2 protein7.3e-6837.47Show/hide
Query:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF
        QRRS IS+I +     C+T+  I K F+DHF +IY    +   W IDN  W+PI  T   +LC  F+ +EI+ AL  F  NKS GPDGFTMEF K TW+ 
Subjt:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF

Query:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------
         KE IL IF DFH NCIIN  VN T IALIAKK+ C  P+DYRPISLTT                       ENQ+AFV+GRQI DAIL+ANEA      
Subjt:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------

Query:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV
                      AF K     +  +L+    P                  +    P  K+ P                                 K V
Subjt:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV

Query:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT
           G  NLTHLLFADDILLF+ED+E +I N++N + LF+LA                                          VPLGGK  ++ FW    
Subjt:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT

Query:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ
        +K+ KK+ +WKY+ LS+G KITLIK++LAS+P Y +S+FK P  + K +++
Subjt:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein1.5e-6035.32Show/hide
Query:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYTKKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNFT
        Q++  IS +       C  D DI   FI HF EIYT  K    FIDN  W PI  T+   L K F+  EI+  LK+F KNK+ GPDGFTM+FL+ +W+F 
Subjt:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYTKKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNFT

Query:  KENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA-------
        K NI +IF DFH N  IN +VN T I LIAKKD C   SD+RPISLTT                       E Q+AFV+GRQIT+AILIANEA       
Subjt:  KENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA-------

Query:  -------------AFHKNGVNGLKLVLLVFN-TPS----------------LSTEDPEVKLNP------------------------------QEASGKR
                     AF K     +  +L+  N +P                 L    P  ++ P                              ++     
Subjt:  -------------AFHKNGVNGLKLVLLVFN-TPS----------------LSTEDPEVKLNP------------------------------QEASGKR

Query:  VSFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSET
        V+F    NLTH+LFADDIL+F+ED E+ ++N++  L LFE A                                          +PLGGK +S +FW   
Subjt:  VSFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSET

Query:  TKKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQY
         +K+QKK+++WKY+ LS+G +ITLI +TL S+P Y +SVFK P    + ++ Y
Subjt:  TKKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQY

A0A5D3DM72 LINE-1 retrotransposable element ORF2 protein1.6e-6737.25Show/hide
Query:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF
        QRRS IS+I +     C+T+  I K F+DHF +IY    +   W IDN  W+PI      +LC +F+ +EI+ AL  F  NKS GPDGFTMEF K TW+ 
Subjt:  QRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYT-KKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNF

Query:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------
         KE IL IF DFH NCIIN  VN T IALIAKK+ C  P+DYRPISLTT                       ENQ+AFV+GRQI DAIL+ANEA      
Subjt:  TKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA------

Query:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV
                      AF K     +  +L+    P                  +    P  K+ P                                 K V
Subjt:  --------------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRV

Query:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT
           G  NLTHLLFADDILLF+ED+E +I N++N + LF+LA                                          VPLGGK  ++ FW    
Subjt:  SFNGKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETT

Query:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ
        +K+ KK+ +WKY+ LS+G KITLIK++LAS+P Y +S+FK P  + K +++
Subjt:  KKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQ

A0A5D3E088 LINE-1 retrotransposable element ORF2 protein3.0e-6137.13Show/hide
Query:  SFISSIYTAQDALCTTDRDIEKTFIDHFGEIYTKKKRD-LWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNFTKE
        S IS+I +     CTT+ +I K F+DHF  IY K   D LW I+N  W+PI  +   +LC  FS +EI++AL  F  NKS G  GFTMEF K TW   K+
Subjt:  SFISSIYTAQDALCTTDRDIEKTFIDHFGEIYTKKKRD-LWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNFTKE

Query:  NILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA---------
        +I  IF DF+ NCIIN  VN T IALIAKK+ C  P+DYRPISLTT                       ENQ+AFV+GRQI DAIL+ANEA         
Subjt:  NILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT-----------------------ENQLAFVRGRQITDAILIANEA---------

Query:  -----------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRVSFN
                   AF K     +  VL+    P                  +    P  K+ P                               + K V   
Subjt:  -----------AFHKNGVNGLKLVLLVFNTP-----------------SLSTEDPEVKLNPQEA----------------------------SGKRVSFN

Query:  GKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETTKKL
           NLTHLLFADDILLF+ED+E ++ N++N + LF+LA                                          VPLGGK  ++ FW     K+
Subjt:  GKHNLTHLLFADDILLFMEDNEETINNMRNALRLFELAL-----------------------------------------VPLGGKSNSRHFWSETTKKL

Query:  QKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPP
         KK+ +WKY+ LS+G KITLIK+TLAS+P Y ++VFK P
Subjt:  QKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPP

SwissProt top hitse value%identityAlignment
P08548 LINE-1 reverse transcriptase homolog1.3e-1033.33Show/hide
Query:  RSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYTKKKRDLWFID---NAPWTP-IKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWN
        +S ISSI    D + T   +I+K   +++ ++Y+ K  +L  ID    A   P + + + + L +  S+ EI + ++N PK KS GPDGFT EF +    
Subjt:  RSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYTKKKRDLWFID---NAPWTP-IKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWN

Query:  FTKENILEIFNDFHKNCIINSIVNSTFIALIAK--KDTCTAPSDYRPISL
             +L +F +  K  I+ +      I LI K  KD  T   +YRPISL
Subjt:  FTKENILEIFNDFHKNCIINSIVNSTFIALIAK--KDTCTAPSDYRPISL

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.1e-0634.94Show/hide
Query:  SAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNFTKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT
        S KEI  A+   P+NK+ GPD FT EF  ++W   K++ +    +F +   +    N+T I LI K       S +RP+S  T
Subjt:  SAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNFTKENILEIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGATATACTGCAAAGGAGAAGCTTCATATCAAGCATTTACACTGCTCAAGATGCTCTGTGTACAACTGATAGGGACATTGAGAAAACCTTCATCGATCATTTTGG
GGAAATCTATACGAAAAAGAAAAGAGATCTTTGGTTCATTGACAACGCCCCCTGGACTCCTATAAAAGAGACAGACCATGATGACCTGTGCAAAATTTTTTCTGCAAAAG
AGATATACAATGCTCTAAAAAACTTCCCCAAAAATAAATCTTCGGGACCAGATGGCTTTACTATGGAGTTTCTCAAGGACACTTGGAATTTCACAAAAGAAAATATATTG
GAAATCTTCAATGACTTCCATAAAAATTGCATCATCAACAGTATTGTGAATTCTACCTTTATTGCTCTCATTGCAAAAAAGGATACATGCACAGCCCCTTCGGATTATAG
GCCCATAAGCCTTACAACTGAGAACCAATTAGCTTTCGTCAGAGGGAGGCAGATTACGGATGCCATTTTGATTGCAAATGAAGCTGCTTTCCACAAAAATGGCGTAAATG
GATTGAAGCTTGTATTACTAGTGTTCAATACTCCATCCTTATCAACGGAAGACCCAGAGGTAAAATTAAACCCACAAGAGGCATCCGGCAAGAGAGTTAGTTTCAATGGG
AAACATAACCTTACTCATCTCCTCTTTGCTGATGATATCCTTCTTTTTATGGAGGACAATGAAGAAACCATAAATAATATGAGGAATGCCCTTCGGCTTTTTGAATTGGC
CTTAGTGCCCTTGGGCGGTAAATCGAACTCTAGACATTTTTGGTCTGAAACAACGAAAAAACTCCAGAAGAAAATCAACAACTGGAAATATGCTTCTCTTTCCAGAGGTA
GCAAGATAACTCTCATTAAAGCTACATTAGCTAGCATTCCTAATTATCACATTTCGGTTTTCAAGCCCCCAAATCTGTCTACAAAGATATTGAAACAATATGGAGAAATT
TCCTCTGGAGAGACACCTTTGATAAGAAAAACACCAACCTCATCAAATGGTCAACGGTGTTGTCTCCTATCAACAAAGGTGGCCTGGGCATTAACAGCGTTCAAAGTACA
AATTTTGCTCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGATATACTGCAAAGGAGAAGCTTCATATCAAGCATTTACACTGCTCAAGATGCTCTGTGTACAACTGATAGGGACATTGAGAAAACCTTCATCGATCATTTTGG
GGAAATCTATACGAAAAAGAAAAGAGATCTTTGGTTCATTGACAACGCCCCCTGGACTCCTATAAAAGAGACAGACCATGATGACCTGTGCAAAATTTTTTCTGCAAAAG
AGATATACAATGCTCTAAAAAACTTCCCCAAAAATAAATCTTCGGGACCAGATGGCTTTACTATGGAGTTTCTCAAGGACACTTGGAATTTCACAAAAGAAAATATATTG
GAAATCTTCAATGACTTCCATAAAAATTGCATCATCAACAGTATTGTGAATTCTACCTTTATTGCTCTCATTGCAAAAAAGGATACATGCACAGCCCCTTCGGATTATAG
GCCCATAAGCCTTACAACTGAGAACCAATTAGCTTTCGTCAGAGGGAGGCAGATTACGGATGCCATTTTGATTGCAAATGAAGCTGCTTTCCACAAAAATGGCGTAAATG
GATTGAAGCTTGTATTACTAGTGTTCAATACTCCATCCTTATCAACGGAAGACCCAGAGGTAAAATTAAACCCACAAGAGGCATCCGGCAAGAGAGTTAGTTTCAATGGG
AAACATAACCTTACTCATCTCCTCTTTGCTGATGATATCCTTCTTTTTATGGAGGACAATGAAGAAACCATAAATAATATGAGGAATGCCCTTCGGCTTTTTGAATTGGC
CTTAGTGCCCTTGGGCGGTAAATCGAACTCTAGACATTTTTGGTCTGAAACAACGAAAAAACTCCAGAAGAAAATCAACAACTGGAAATATGCTTCTCTTTCCAGAGGTA
GCAAGATAACTCTCATTAAAGCTACATTAGCTAGCATTCCTAATTATCACATTTCGGTTTTCAAGCCCCCAAATCTGTCTACAAAGATATTGAAACAATATGGAGAAATT
TCCTCTGGAGAGACACCTTTGATAAGAAAAACACCAACCTCATCAAATGGTCAACGGTGTTGTCTCCTATCAACAAAGGTGGCCTGGGCATTAACAGCGTTCAAAGTACA
AATTTTGCTCTACTAA
Protein sequenceShow/hide protein sequence
MFDILQRRSFISSIYTAQDALCTTDRDIEKTFIDHFGEIYTKKKRDLWFIDNAPWTPIKETDHDDLCKIFSAKEIYNALKNFPKNKSSGPDGFTMEFLKDTWNFTKENIL
EIFNDFHKNCIINSIVNSTFIALIAKKDTCTAPSDYRPISLTTENQLAFVRGRQITDAILIANEAAFHKNGVNGLKLVLLVFNTPSLSTEDPEVKLNPQEASGKRVSFNG
KHNLTHLLFADDILLFMEDNEETINNMRNALRLFELALVPLGGKSNSRHFWSETTKKLQKKINNWKYASLSRGSKITLIKATLASIPNYHISVFKPPNLSTKILKQYGEI
SSGETPLIRKTPTSSNGQRCCLLSTKVAWALTAFKVQILLY