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CSPI06G26250 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G26250
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:23219427..23220180
RNA-Seq ExpressionCSPI06G26250
SyntenyCSPI06G26250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040704.1 hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa]1.2e-2562.96Show/hide
Query:  MTLGIGIGGDLQIV-PLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFP-SVVSF
        MTLGI I G LQIV PL   D+ L ++ V  V+ HC+++L IDA FEG IDG  E+G NGKTY LKLKLKVRIGDAYV+KIV+VK F+PF+G P +++SF
Subjt:  MTLGIGIGGDLQIV-PLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFP-SVVSF

Query:  EYLEEISI
        EY+EEI+I
Subjt:  EYLEEISI

KAE8647454.1 hypothetical protein Csa_003781 [Cucumis sativus]1.8e-4590.57Show/hide
Query:  MTLGIGIGGDLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEY
        MTLGIGI G LQIVPLDLSDNTLCDLLVQHV+KHCQSVLQIDATFEG IDG IEIGLNGKTY LKLK+KVRIGDAYVVKIVLV+LFFPFVG+PSVVSFEY
Subjt:  MTLGIGIGGDLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEY

Query:  LEEISI
        LEEI+I
Subjt:  LEEISI

KGN48337.1 hypothetical protein Csa_004454 [Cucumis sativus]1.8e-1852.63Show/hide
Query:  QIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEISI
        QI+P+D SD +L +  V  VI HCQS+ QID  FEG + G  E+G NGKTY L+LKLK ++GD YV+KI ++K F P  G PS++SFE  +EI++
Subjt:  QIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEISI

XP_031744690.1 actin-related protein 2-like [Cucumis sativus]3.0e-0543.94Show/hide
Query:  SVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLE
        +VL+I+   E  +D   E+  NGKT+ LKLKLKV++ D+   KI +VK+F+P +G P+++SF  +E
Subjt:  SVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLE

TrEMBL top hitse value%identityAlignment
A0A0A0KFK8 Uncharacterized protein1.7e-4692.45Show/hide
Query:  MTLGIGIGGDLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEY
        MTLGIGI G LQIVPLDLSDNTLCDLLVQHV+KHCQSVLQIDATFEG IDG IEIGLNGKTY LKLK+KVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEY
Subjt:  MTLGIGIGGDLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEY

Query:  LEEISI
        LEEI+I
Subjt:  LEEISI

A0A0A0KFL5 Uncharacterized protein2.2e-4180.39Show/hide
Query:  MTLGIGIGGDLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEY
        M++G+GIGG LQIVP+DLSDNTLCDLLVQHV+KHCQ+VLQIDAT+EGFIDGSIEIG+NGKTY  KLKLK+++GDAYV+K VLVK+FFPF+G PS+VSFEY
Subjt:  MTLGIGIGGDLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEY

Query:  LE
        LE
Subjt:  LE

A0A0A0KIX9 Uncharacterized protein8.9e-1952.63Show/hide
Query:  QIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEISI
        QI+P+D SD +L +  V  VI HCQS+ QID  FEG + G  E+G NGKTY L+LKLK ++GD YV+KI ++K F P  G PS++SFE  +EI++
Subjt:  QIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEISI

A0A0A0KKQ8 Uncharacterized protein7.5e-5099.06Show/hide
Query:  MTLGIGIGGDLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEY
        MTLGIGIGG LQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEY
Subjt:  MTLGIGIGGDLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEY

Query:  LEEISI
        LEEISI
Subjt:  LEEISI

A0A5D3BPM4 Uncharacterized protein5.8e-2662.96Show/hide
Query:  MTLGIGIGGDLQIV-PLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFP-SVVSF
        MTLGI I G LQIV PL   D+ L ++ V  V+ HC+++L IDA FEG IDG  E+G NGKTY LKLKLKVRIGDAYV+KIV+VK F+PF+G P +++SF
Subjt:  MTLGIGIGGDLQIV-PLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFP-SVVSF

Query:  EYLEEISI
        EY+EEI+I
Subjt:  EYLEEISI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTTGGAATCGGGATTGGTGGTGACCTTCAAATTGTTCCATTGGATCTATCGGACAATACCCTTTGTGATTTACTTGTTCAGCATGTGATTAAGCACTGTCAGAG
TGTACTTCAAATTGACGCCACCTTTGAAGGTTTTATAGATGGTTCGATTGAGATTGGGCTGAATGGCAAAACATATATCCTTAAGTTGAAGTTAAAGGTCAGAATTGGTG
ATGCTTATGTTGTTAAGATCGTTCTGGTTAAACTCTTTTTTCCATTCGTTGGCTTTCCCAGCGTTGTGTCTTTCGAGTATCTTGAAGAAATTAGCATCTAG
mRNA sequenceShow/hide mRNA sequence
AGAGAGGTAAGTGTGATGGAGTGTATATAAAGAGGAGTGAAGAGTTAAGTAGAGATCATAGAAGTTTGTGAGAGAATTAGGCTTATATATATTCAATATATATATCATAT
CAAATTAGCTTATAATTTGAAAGATGACTCTTGGAATCGGGATTGGTGGTGACCTTCAAATTGTTCCATTGGATCTATCGGACAATACCCTTTGTGATTTACTTGTTCAG
CATGTGATTAAGCACTGTCAGAGTGTACTTCAAATTGACGCCACCTTTGAAGGTTTTATAGATGGTTCGATTGAGATTGGGCTGAATGGCAAAACATATATCCTTAAGTT
GAAGTTAAAGGTCAGAATTGGTGATGCTTATGTTGTTAAGATCGTTCTGGTTAAACTCTTTTTTCCATTCGTTGGCTTTCCCAGCGTTGTGTCTTTCGAGTATCTTGAAG
AAATTAGCATCTAGAAACCATGAAATCATGCTATGGATAATGAAAATGGTGCTTTCTTATGCATCATTTCCATCTCTCTTACCTATCTATCAATAAGTATGTAAAGCTGG
TCTCTCTTTACCAATGCAATAAGGGATGTTTTTATTTACAGTATATTTCAAATTTCTTAATGTTGTCTTTTTTTTTTTTTTTGGATCTTTCTTCTACTTCTTAAATCTCC
GTCGGTTCGAAGTATTGTTACTCACATTTTTCCTCATCTGTAGGATCGAATAACGAAGGTTCAATAAGTAAAAGAATGAATATTAATTTGGAGA
Protein sequenceShow/hide protein sequence
MTLGIGIGGDLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEISI