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CSPI06G26280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G26280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:23249370..23249854
RNA-Seq ExpressionCSPI06G26280
SyntenyCSPI06G26280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040704.1 hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa]5.7e-2864.81Show/hide
Query:  MTLGIGISGGLQIV-PLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYP-SVVSF
        MTLGI ISGGLQIV PL   D+ L ++ V  V+ HC+++L IDA FEG+IDG  E+G NGKTYTLKLK+KVRIGDAYV+KIV+V+ F+PF+G P +++SF
Subjt:  MTLGIGISGGLQIV-PLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYP-SVVSF

Query:  EYLEEINI
        EY+EEINI
Subjt:  EYLEEINI

KAE8647454.1 hypothetical protein Csa_003781 [Cucumis sativus]9.0e-5098.11Show/hide
Query:  MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEY
        MTLGIGISGGLQIVPLDLSDNTLCDLLVQHV++HCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEY
Subjt:  MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEY

Query:  LEEINI
        LEEINI
Subjt:  LEEINI

KGN48337.1 hypothetical protein Csa_004454 [Cucumis sativus]9.8e-2052.63Show/hide
Query:  QIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEYLEEINI
        QI+P+D SD +L +  V  VI HCQS+ QID  FEG++ G+ E+G NGKTYTL+LK+K ++GD YV+KI +++ F P  G PS++SFE  +EIN+
Subjt:  QIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEYLEEINI

XP_031744690.1 actin-related protein 2-like [Cucumis sativus]1.0e-0542.42Show/hide
Query:  SVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEYLE
        +VL+I+   E ++D   E+  NGKT+TLKLK+KV++ D+   KI +V++F+P +G P+++SF  +E
Subjt:  SVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEYLE

TrEMBL top hitse value%identityAlignment
A0A0A0KFK8 Uncharacterized protein2.8e-4996.23Show/hide
Query:  MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEY
        MTLGIGISGGLQIVPLDLSDNTLCDLLVQHV++HCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLV+LFFPFVG+PSVVSFEY
Subjt:  MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEY

Query:  LEEINI
        LEEINI
Subjt:  LEEINI

A0A0A0KFL5 Uncharacterized protein7.8e-3974.51Show/hide
Query:  MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEY
        M++G+GI G LQIVP+DLSDNTLCDLLVQHV++HCQ+VLQIDAT+EG IDG IEIG+NGKTY+ KLK+K+++GDAYV+K VLV++FFPF+G PS+VSFEY
Subjt:  MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEY

Query:  LE
        LE
Subjt:  LE

A0A0A0KIX9 Uncharacterized protein4.7e-2052.63Show/hide
Query:  QIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEYLEEINI
        QI+P+D SD +L +  V  VI HCQS+ QID  FEG++ G+ E+G NGKTYTL+LK+K ++GD YV+KI +++ F P  G PS++SFE  +EIN+
Subjt:  QIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEYLEEINI

A0A0A0KKQ8 Uncharacterized protein1.3e-4691.51Show/hide
Query:  MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEY
        MTLGIGI GGLQIVPLDLSDNTLCDLLVQHVI+HCQSVLQIDATFEG IDG IEIGLNGKTY LKLK+KVRIGDAYVVKIVLV+LFFPFVG+PSVVSFEY
Subjt:  MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEY

Query:  LEEINI
        LEEI+I
Subjt:  LEEINI

A0A5D3BPM4 Uncharacterized protein2.8e-2864.81Show/hide
Query:  MTLGIGISGGLQIV-PLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYP-SVVSF
        MTLGI ISGGLQIV PL   D+ L ++ V  V+ HC+++L IDA FEG+IDG  E+G NGKTYTLKLK+KVRIGDAYV+KIV+V+ F+PF+G P +++SF
Subjt:  MTLGIGISGGLQIV-PLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYP-SVVSF

Query:  EYLEEINI
        EY+EEINI
Subjt:  EYLEEINI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTTGGAATCGGGATTTCTGGTGGCCTTCAAATTGTTCCATTGGATCTATCGGACAATACGCTTTGTGATTTACTTGTTCAGCATGTGATTCAGCACTGTCAGAG
TGTACTTCAAATTGACGCCACCTTTGAAGGTTTAATAGATGGTAAGATTGAGATTGGGCTGAATGGCAAAACATATACCCTTAAGTTGAAGATAAAGGTCAGGATTGGTG
ATGCTTATGTTGTTAAGATCGTTCTGGTTAGACTCTTTTTCCCATTTGTTGGCTATCCCAGCGTTGTGTCTTTCGAGTATCTTGAAGAAATCAACATCTAG
mRNA sequenceShow/hide mRNA sequence
GAAGAGTTAAGTTGAAATCATAGAAGTTTGTGAGAGAATTAGAATTATAGATATCCAATATATATATCATATCAAATTACCTTATAATTTGAAAGATGACTCTTGGAATC
GGGATTTCTGGTGGCCTTCAAATTGTTCCATTGGATCTATCGGACAATACGCTTTGTGATTTACTTGTTCAGCATGTGATTCAGCACTGTCAGAGTGTACTTCAAATTGA
CGCCACCTTTGAAGGTTTAATAGATGGTAAGATTGAGATTGGGCTGAATGGCAAAACATATACCCTTAAGTTGAAGATAAAGGTCAGGATTGGTGATGCTTATGTTGTTA
AGATCGTTCTGGTTAGACTCTTTTTCCCATTTGTTGGCTATCCCAGCGTTGTGTCTTTCGAGTATCTTGAAGAAATCAACATCTAGAAACAATGAAATCATGCTATGGAT
AGTGAAAATGGTGTTTTCTTATGCATAATTTCCATCTCTCTTACC
Protein sequenceShow/hide protein sequence
MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVIQHCQSVLQIDATFEGLIDGKIEIGLNGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEYLEEINI