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CSPI06G26340 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G26340
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:23281559..23281867
RNA-Seq ExpressionCSPI06G26340
SyntenyCSPI06G26340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040704.1 hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa]4.5e-2255.34Show/hide
Query:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLP-SIVSFE
        M++G+ I G LQIV  +  D+ L ++ V  V+ HC+ +L IDA +EG IDG  E+G NGKTY+ KLKLK+++GDAYVIK V+VK F+PFIGLP +++SFE
Subjt:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLP-SIVSFE

Query:  YLE
        Y+E
Subjt:  YLE

KAE8647454.1 hypothetical protein Csa_003781 [Cucumis sativus]8.2e-4076.47Show/hide
Query:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEY
        M++G+GI G LQIVP+DLSDNTLCDLLVQHVMKHCQ+VLQIDAT+EG IDG IEIG+NGKTY+ KLK+K+++GDAYV+K VLV++FFPF+G PS+VSFEY
Subjt:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEY

Query:  LE
        LE
Subjt:  LE

KGN48337.1 hypothetical protein Csa_004454 [Cucumis sativus]7.4e-1751.11Show/hide
Query:  SLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFE
        S QI+P+D SD +L +  V  V+ HCQ++ QID  +EG + G  E+G NGKTY+ +LKLK KVGD YV+K  ++K F P  G PS++SFE
Subjt:  SLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFE

XP_031744690.1 actin-related protein 2-like [Cucumis sativus]3.5e-0648.48Show/hide
Query:  TVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEYLE
        TVL+I+   E  +D   E+  NGKT++ KLKLK+K+ D+   K  +VKIF+P IGLP+I+SF  +E
Subjt:  TVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEYLE

TrEMBL top hitse value%identityAlignment
A0A0A0KFK8 Uncharacterized protein1.4e-4077.45Show/hide
Query:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEY
        M++G+GI G LQIVP+DLSDNTLCDLLVQHVMKHCQ+VLQIDAT+EG IDG IEIG+NGKTY+ KLK+K+++GDAYV+K VLVK+FFPF+G PS+VSFEY
Subjt:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEY

Query:  LE
        LE
Subjt:  LE

A0A0A0KFL5 Uncharacterized protein9.4e-50100Show/hide
Query:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEY
        MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEY
Subjt:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEY

Query:  LE
        LE
Subjt:  LE

A0A0A0KIX9 Uncharacterized protein3.6e-1751.11Show/hide
Query:  SLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFE
        S QI+P+D SD +L +  V  V+ HCQ++ QID  +EG + G  E+G NGKTY+ +LKLK KVGD YV+K  ++K F P  G PS++SFE
Subjt:  SLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFE

A0A0A0KKQ8 Uncharacterized protein7.2e-4280.39Show/hide
Query:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEY
        M++G+GIGG LQIVP+DLSDNTLCDLLVQHV+KHCQ+VLQIDAT+EGFIDGSIEIG+NGKTY  KLKLK+++GDAYV+K VLVK+FFPF+G PS+VSFEY
Subjt:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEY

Query:  LE
        LE
Subjt:  LE

A0A5D3BPM4 Uncharacterized protein2.2e-2255.34Show/hide
Query:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLP-SIVSFE
        M++G+ I G LQIV  +  D+ L ++ V  V+ HC+ +L IDA +EG IDG  E+G NGKTY+ KLKLK+++GDAYVIK V+VK F+PFIGLP +++SFE
Subjt:  MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLP-SIVSFE

Query:  YLE
        Y+E
Subjt:  YLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTTGGAATGGGGATTGGTGGTAGCCTTCAAATTGTTCCAATGGATCTATCGGACAATACGCTTTGTGATTTACTGGTTCAGCATGTGATGAAGCACTGTCAGAC
TGTACTTCAAATTGACGCCACCTATGAAGGTTTTATAGATGGTTCGATTGAGATTGGGATGAATGGCAAAACATATTCCTTTAAGTTGAAGTTGAAGATCAAGGTTGGTG
ATGCTTATGTTATTAAGCCCGTTCTGGTTAAAATCTTTTTTCCATTCATTGGCCTTCCAAGCATTGTGTCTTTCGAGTATCTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTTGGAATGGGGATTGGTGGTAGCCTTCAAATTGTTCCAATGGATCTATCGGACAATACGCTTTGTGATTTACTGGTTCAGCATGTGATGAAGCACTGTCAGAC
TGTACTTCAAATTGACGCCACCTATGAAGGTTTTATAGATGGTTCGATTGAGATTGGGATGAATGGCAAAACATATTCCTTTAAGTTGAAGTTGAAGATCAAGGTTGGTG
ATGCTTATGTTATTAAGCCCGTTCTGGTTAAAATCTTTTTTCCATTCATTGGCCTTCCAAGCATTGTGTCTTTCGAGTATCTTGAATGA
Protein sequenceShow/hide protein sequence
MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEYLE