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CSPI06G26800 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G26800
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
Genome locationChr6:23594903..23598192
RNA-Seq ExpressionCSPI06G26800
SyntenyCSPI06G26800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647470.1 hypothetical protein Csa_004096 [Cucumis sativus]4.6e-6599.3Show/hide
Query:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKT
        MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPE VVSDSVTENKT
Subjt:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKT

Query:  VTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
        VTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
Subjt:  VTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN

XP_004148639.1 neurofilament medium polypeptide isoform X2 [Cucumis sativus]4.6e-6599.3Show/hide
Query:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKT
        MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPE VVSDSVTENKT
Subjt:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKT

Query:  VTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
        VTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
Subjt:  VTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN

XP_008441002.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]1.2e-4973.56Show/hide
Query:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSEN
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSEN
Subjt:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSEN

Query:  NPPEAVVSDSVTENKTVTE----METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
        NPPE  VSDSVTEN TV      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  NPPEAVVSDSVTENKTVTE----METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN

XP_008441003.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucumis melo]9.0e-5381.01Show/hide
Query:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKT
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSENNPPE  VSDSVTEN T
Subjt:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKT

Query:  VTE----METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
        V      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  VTE----METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN

XP_031744063.1 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis sativus]4.8e-6289.87Show/hide
Query:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENN
        MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK               KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENN
Subjt:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENN

Query:  PPEAVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
        PPE VVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
Subjt:  PPEAVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN

TrEMBL top hitse value%identityAlignment
A0A0A0KFS6 Uncharacterized protein2.3e-6289.87Show/hide
Query:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENN
        MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK               KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENN
Subjt:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENN

Query:  PPEAVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
        PPE VVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
Subjt:  PPEAVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN

A0A1S3B2F3 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X24.4e-5381.01Show/hide
Query:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKT
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSENNPPE  VSDSVTEN T
Subjt:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKT

Query:  VTE----METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
        V      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  VTE----METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X15.9e-5073.56Show/hide
Query:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSEN
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSEN
Subjt:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSEN

Query:  NPPEAVVSDSVTENKTVTE----METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
        NPPE  VSDSVTEN TV      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  NPPEAVVSDSVTENKTVTE----METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X15.9e-5073.56Show/hide
Query:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSEN
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSEN
Subjt:  MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSEN

Query:  NPPEAVVSDSVTENKTVTE----METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
        NPPE  VSDSVTEN TV      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  NPPEAVVSDSVTENKTVTE----METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN

A0A6J1GDB0 pollen-specific leucine-rich repeat extensin-like protein 15.6e-1649.17Show/hide
Query:  MGACATKPKDLKAESGDAPEELPA----------ETK-PDHVGDEKAKEIVVDDDKKE----------GNKEKTEDADPPEKQ-----------------
        MGACATKPK LK +SGDAP   PA          ETK  D   D +  EI VD+DK +           ++EKT  ADP EK+                 
Subjt:  MGACATKPKDLKAESGDAPEELPA----------ETK-PDHVGDEKAKEIVVDDDKKE----------GNKEKTEDADPPEKQ-----------------

Query:  --ETNPPETEKQINPLPEEKPSENNP--PEAVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEV
          ET PPETEK+INP  EEKPSE NP  PE  VSDSVTEN    E       IKVEV  EN  PPEKTES EKPTETE+ V
Subjt:  --ETNPPETEKQINPLPEEKPSENNP--PEAVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTGTGCCACAAAGCCAAAGGATCTGAAGGCGGAGTCCGGCGACGCTCCGGAGGAGTTGCCGGCCGAAACTAAACCGGATCATGTCGGTGATGAAAAGGCGAA
GGAGATCGTCGTTGATGATGACAAGAAGGAAGGTAATAAGGAGAAGACTGAAGATGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAA
ACCCACTACCGGAGGAGAAGCCGTCTGAAAACAACCCACCGGAGGCAGTAGTTTCGGACTCTGTTACAGAAAACAAAACTGTAACAGAAATGGAAACCCCAGATGAGGCA
ATCAAAGTGGAAGTTACCATTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCAGCGGAGAAACCAACTGAAACAGAGAAGGAAGTGAAGGTAACTAATTAG
mRNA sequenceShow/hide mRNA sequence
CTAAGCATAAATAATGTAATGTTGTTGAGTATTTGTTTTGTTTTTATTAATAAGTTTTTTTTTTTAAATTGCAATTTCGTTGTTTGTGACCAATTGTCCCAATCCCAAAT
TGCCGAAAATCCCTCTTTATAAATTATTAAACCCATCTTCTCTCTGTTTCTCACTTTCATTCGTTCATTCATTCATTCATTCACACACACACACACACAACAGCAACAGC
AAAAGAAAAGATGGGAGCTTGTGCCACAAAGCCAAAGGATCTGAAGGCGGAGTCCGGCGACGCTCCGGAGGAGTTGCCGGCCGAAACTAAACCGGATCATGTCGGTGATG
AAAAGGCGAAGGAGATCGTCGTTGATGATGACAAGAAGGAAGGTAATAAGGAGAAGACTGAAGATGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAA
AAGCAAATAAACCCACTACCGGAGGAGAAGCCGTCTGAAAACAACCCACCGGAGGCAGTAGTTTCGGACTCTGTTACAGAAAACAAAACTGTAACAGAAATGGAAACCCC
AGATGAGGCAATCAAAGTGGAAGTTACCATTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCAGCGGAGAAACCAACTGAAACAGAGAAGGAAGTGAAGGTAACTAATT
AGCAATTGATCAATAAATTATTTTCGAAACGAAAATCCCTTCATTAGTTAATTACCAACTGAGGAACCATTATCCAAAAATTGTTTCATTTTCGTCTTCTTTTTTCCTTT
TAGTTGTTATGACTTATGGGGAAAAATGCATACCTTCATCTTTACTTCTCTCTTAACTACTTTTTGTTCTTCTTTATGTTTCTGTCTCTGCTTTCATAGC
Protein sequenceShow/hide protein sequence
MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKTVTEMETPDEA
IKVEVTIENDVPPEKTESAEKPTETEKEVKVTN