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CSPI06G27010 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G27010
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationChr6:23786201..23786953
RNA-Seq ExpressionCSPI06G27010
SyntenyCSPI06G27010
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB64484.1 hypothetical protein L484_006721 [Morus notabilis]8.5e-2263.74Show/hide
Query:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNG-TIKKED-----VANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD
        M+RSKSL G YS  YGD RFGFED  KSYSFNG +++ ED      +N E+KRR+RVA YNMY+MEGKLK SLRNSFKWIK+K   ++YD+
Subjt:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNG-TIKKED-----VANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD

KAE8647476.1 hypothetical protein Csa_003778 [Cucumis sativus]5.3e-40100Show/hide
Query:  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD
        MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD
Subjt:  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD

PON52269.1 hypothetical protein TorRG33x02_308860 [Trema orientale]2.5e-2163.74Show/hide
Query:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKK------EDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD
        MERSKSL G YS  YGD RFGFED  KSYSFNG   +          N E+KRR+RVA YNMY+MEGKLK SLRNSFKWIK+K   ++YDD
Subjt:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKK------EDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD

PRQ49076.1 hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis]3.2e-2160.64Show/hide
Query:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKED---------VANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD
        ME+SKS SG YS AY + RFGFED PKSYSFNG + K +          +N EL+RR+RVA YNMY+MEGK K SLRNSFKWIK K   +FYD+
Subjt:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKED---------VANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD

TYK12983.1 hypothetical protein E5676_scaffold255G005800 [Cucumis melo var. makuwa]1.4e-3795.29Show/hide
Query:  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYD
        MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSF+GT+KKEDV NQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFY+
Subjt:  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYD

TrEMBL top hitse value%identityAlignment
A0A0A0KFC2 Uncharacterized protein2.6e-40100Show/hide
Query:  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD
        MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD
Subjt:  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD

A0A2P5BU01 Uncharacterized protein1.2e-2163.74Show/hide
Query:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKK------EDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD
        MERSKSL G YS  YGD RFGFED  KSYSFNG   +          N E+KRR+RVA YNMY+MEGKLK SLRNSFKWIK+K   ++YDD
Subjt:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKK------EDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD

A0A2P6RRL4 Uncharacterized protein1.6e-2160.64Show/hide
Query:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKED---------VANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD
        ME+SKS SG YS AY + RFGFED PKSYSFNG + K +          +N EL+RR+RVA YNMY+MEGK K SLRNSFKWIK K   +FYD+
Subjt:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKED---------VANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD

A0A5D3CM35 Uncharacterized protein7.0e-3895.29Show/hide
Query:  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYD
        MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSF+GT+KKEDV NQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFY+
Subjt:  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYD

W9RA26 Uncharacterized protein4.1e-2263.74Show/hide
Query:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNG-TIKKED-----VANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD
        M+RSKSL G YS  YGD RFGFED  KSYSFNG +++ ED      +N E+KRR+RVA YNMY+MEGKLK SLRNSFKWIK+K   ++YD+
Subjt:  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNG-TIKKED-----VANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)8.2e-0737.8Show/hide
Query:  KSLSGSYSKAYGDVRFGFED-NPKSYSFNGTIKK--EDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFY
        +S S S   AY +     +D N KS   N   KK  + +   E++R++RVA+YN+Y +EG++K S++ SFKW K   S++ Y
Subjt:  KSLSGSYSKAYGDVRFGFED-NPKSYSFNGTIKK--EDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFY

AT2G19460.1 Protein of unknown function (DUF3511)1.4e-0641.43Show/hide
Query:  SYSKAYGD--VRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK
        SYS +Y D   R   + NPK    + +       + +L+R++RV +Y  Y++EGKLK S R SFKWIK+K
Subjt:  SYSKAYGD--VRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK

AT2G47480.1 Protein of unknown function (DUF3511)1.1e-0647.83Show/hide
Query:  VANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK---ISHSF
        +++ E+KR++R+A Y  Y++EGK+K +L+N F+WIKNK   I H F
Subjt:  VANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK---ISHSF

AT4G09890.1 Protein of unknown function (DUF3511)1.3e-1248.15Show/hide
Query:  MMERSKSLSGSYSKAYGDVRFGFEDN-PKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKIS
        MM+ SKS +  YS ++    FG++ N   SY+FNG     D    E+KR++RVA+YN+++ E KLK +L+NSFKWIKNK S
Subjt:  MMERSKSLSGSYSKAYGDVRFGFEDN-PKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKIS

AT5G11970.1 Protein of unknown function (DUF3511)2.6e-0840.54Show/hide
Query:  SYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFY
        SYS +YG       D  K  S     K   + + EL+R++RVA+Y MY +EGK+K S RNSF+W+K + +   Y
Subjt:  SYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCAATGGAACAATCAA
AAAGGAAGATGTGGCCAATCAAGAGCTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGT
GGATCAAGAACAAGATTTCCCACAGCTTTTATGATGATTGA
mRNA sequenceShow/hide mRNA sequence
AAGAAAGCTAACAATATCTACTAACAAAGAAACTTTGATATGATTTATACCCACACAAAGATTTCTGGTATCACGTATTTATAGGAGAGATGACAAACTTATGAACCATA
TCCAAAGTTTCTAATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCA
ATGGAACAATCAAAAAGGAAGATGTGGCCAATCAAGAGCTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGA
AACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATGATGATTGAGCTGAGACTTTTCCTTTTGTAAAACTATTTTTGTTTCTCTGTAAAATTTGTCCATC
TCCTCATACTCAATGAAGAGGAGTGTTTCAAGCTGATAGAGACAACAAGGTTATGCAAACTTCTAAACTATATGTAATAACTTCAATTCGATGGCTATCTCTACATTAAT
CCCCAATCATAATTCATTATACAACTGAACAGTCACTAGAGCTAGCAGGGTTTTAATTTAGTAAAACATAATGTTATTTACCTAGCATGGGTGCAACAATCTTGTCATAA
GCTCATGAGTTTCAAGGAATAATATAACATCATCAAATTTTGAATGATGCTTTGCTTCATAGACCAGAAAAATAGATGGCTTTCACATTCTTC
Protein sequenceShow/hide protein sequence
MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD