; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G27180 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G27180
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionHeat shock protein 40
Genome locationChr6:23937323..23937667
RNA-Seq ExpressionCSPI06G27180
SyntenyCSPI06G27180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647478.1 hypothetical protein Csa_003673 [Cucumis sativus]3.4e-36100Show/hide
Query:  MEKKNNDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKLSPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
        MEKKNNDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKLSPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
Subjt:  MEKKNNDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKLSPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
KAG6604244.1 hypothetical protein SDJN03_04853, partial [Cucurbita argyrosperma subsp. sororia]7.1e-1052.56Show/hide
Query:  NDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKL-SPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
        N  K+ PIV+  GET  K T  WSP MD+IV++ S   SL + +DE+D+KID +LY SS+  +RLPIFEE+CP  S+S
Subjt:  NDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKL-SPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
TYK12969.1 heat shock protein 40 [Cucumis melo var. makuwa]6.2e-3087.8Show/hide
Query:  MEKKNNDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKLSPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
        MEKKNNDDKK PIVLRSGET+KKST+NWSPAMDNIVKLS KM+LG+ALDELD+KIDAILY S R+TKRLPIFEEICPIHSSS
Subjt:  MEKKNNDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKLSPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
TrEMBL top hitse value%identityAlignment
A0A0A0KKZ2 Uncharacterized protein1.6e-36100Show/hide
Query:  MEKKNNDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKLSPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
        MEKKNNDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKLSPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
Subjt:  MEKKNNDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKLSPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
A0A5D3CRK5 Heat shock protein 403.0e-3087.8Show/hide
Query:  MEKKNNDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKLSPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
        MEKKNNDDKK PIVLRSGET+KKST+NWSPAMDNIVKLS KM+LG+ALDELD+KIDAILY S R+TKRLPIFEEICPIHSSS
Subjt:  MEKKNNDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKLSPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAAAACAACGACGATAAAAAGACTCCGATTGTGCTCAGGTCTGGTGAAACAAAGAAAAAGTCGACGTCCAATTGGTCGCCGGCGATGGATAATATAGTGAA
GCTCTCCCCCAAGATGTCATTGGGTGAAGCACTGGATGAACTCGATGCCAAAATCGATGCTATTCTTTATTCTTCTTCACGCAGAACCAAGAGATTGCCAATTTTTGAGG
AGATTTGTCCAATTCATTCATCTTCGTGA
mRNA sequenceShow/hide mRNA sequence
TCCCCATCTCATCACTTCAATTCGTAGCTAATTGGTTTTGATCCACAATCATTAGTCTGTGATTAAAAACTCTCACCATCCTAAACTCGACCGTCATGGAGAAGAAAAAC
AACGACGATAAAAAGACTCCGATTGTGCTCAGGTCTGGTGAAACAAAGAAAAAGTCGACGTCCAATTGGTCGCCGGCGATGGATAATATAGTGAAGCTCTCCCCCAAGAT
GTCATTGGGTGAAGCACTGGATGAACTCGATGCCAAAATCGATGCTATTCTTTATTCTTCTTCACGCAGAACCAAGAGATTGCCAATTTTTGAGGAGATTTGTCCAATTC
ATTCATCTTCGTGAG
Protein sequenceShow/hide protein sequence
MEKKNNDDKKTPIVLRSGETKKKSTSNWSPAMDNIVKLSPKMSLGEALDELDAKIDAILYSSSRRTKRLPIFEEICPIHSSS