; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G27280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G27280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Genome locationChr6:24005639..24009756
RNA-Seq ExpressionCSPI06G27280
SyntenyCSPI06G27280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141960.1 uncharacterized protein LOC101206523 [Cucumis sativus]1.3e-53100Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

XP_008440144.1 PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo]1.3e-5096.12Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPY-HQNHHSPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTD+FPTDNHHPY HQ+HH PPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPY-HQNHHSPPTRKSILSCFNCC

Query:  VKA
        VKA
Subjt:  VKA

XP_022950290.1 uncharacterized protein LOC111453422 [Cucurbita moschata]1.3e-5093.14Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRD+SRASLGNEEELIA AAPPTTT++FPTDNHHPYHQ+HHSPPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

XP_022977957.1 uncharacterized protein LOC111478092 [Cucurbita maxima]3.5e-5194.12Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPTTTD+FPTDNHHPYHQ+HHSPPTRKSILSCFNCC+
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

XP_023545041.1 uncharacterized protein LOC111804467 [Cucurbita pepo subsp. pepo]6.0e-5194.12Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPTTT++FPTDNHHPYHQ+HHSPPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

TrEMBL top hitse value%identityAlignment
A0A0A0KJ83 Uncharacterized protein6.3e-54100Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

A0A1S3B0G0 uncharacterized protein LOC103484698 isoform X26.5e-5196.12Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPY-HQNHHSPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTD+FPTDNHHPY HQ+HH PPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPY-HQNHHSPPTRKSILSCFNCC

Query:  VKA
        VKA
Subjt:  VKA

A0A6J1BXX7 uncharacterized protein LOC111005740 isoform X22.7e-4991.18Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKG LPDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA A PPT TD+FPT+NHHPYHQ+HH PPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

A0A6J1GFA9 uncharacterized protein LOC1114534226.5e-5193.14Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRD+SRASLGNEEELIA AAPPTTT++FPTDNHHPYHQ+HHSPPTRKSILSCFNCCV
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

A0A6J1IJV1 uncharacterized protein LOC1114780921.7e-5194.12Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPTTTD+FPTDNHHPYHQ+HHSPPTRKSILSCFNCC+
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCV

Query:  KA
        KA
Subjt:  KA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown6.7e-3262.73Show/hide
Query:  DDRKEKTAPWLSVPQFGDWDQK--GQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTT---DTFPTDNHHPYHQNH----HSPPTRKSI
        DDRKEK  PWLSVPQFGDWDQK  G +PDYS+DF+K+RE RKQNKRD SRASLGNEEELI      T+T    T  ++N   +  +H    HSP TR+S+
Subjt:  DDRKEKTAPWLSVPQFGDWDQK--GQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTT---DTFPTDNHHPYHQNH----HSPPTRKSI

Query:  LSCFNCCVKA
         SCFNCCVKA
Subjt:  LSCFNCCVKA

AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein3.7e-1439.62Show/hide
Query:  DRKEKTAPWLSVPQFGDWDQKG--QLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPP-----TRKSILSC
        D++ + A W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+               NH   H  H +        +K IL+ 
Subjt:  DRKEKTAPWLSVPQFGDWDQKG--QLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPP-----TRKSILSC

Query:  FNCCVK
         NCC++
Subjt:  FNCCVK

AT5G64850.1 FUNCTIONS IN: molecular_function unknown6.9e-2959.65Show/hide
Query:  MDDRKE-KTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI--------AKAAPPTTTDTFPTDNHHP---YHQNHHSPPT
        M+DRKE K +PWLSVPQFGDWDQKG   DYS+DFSK+RE RK NKRD SRASLGNEEELI           A P    T  +DN++     H + HSP  
Subjt:  MDDRKE-KTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI--------AKAAPPTTTDTFPTDNHHP---YHQNHHSPPT

Query:  RKSILSCFNCCVKA
        R+ I SCFNCCVKA
Subjt:  RKSILSCFNCCVKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTGCCACAATTTGGAGACTGGGACCAGAAGGGACAGCTGCCTGATTACTCGCTTGATTTCTCAAAACTTAG
GGAAAATAGGAAACAAAACAAGAGAGACGTGTCTCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCAAAGCCGCACCCCCAACGACAACAGACACTTTCCCTACTG
ATAATCATCACCCTTATCATCAGAATCACCACTCCCCACCAACAAGAAAGAGCATTTTAAGTTGCTTCAACTGCTGCGTGAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ACAATACAACTGTAAAAGCCTGAGAAACAGCGAAGGCCACTTAGACTAGTGCGTGCAGTAGTGGCATTCTCGTAATATTGCAAAGCGCGGAGACCCACTATCGTCAATTC
ATACACCTTTATATATACACTCAACAGAGTCTTTTCTGTTTTTTCTTTTTTACTTTTATCTAACGAAGAAGAAGAAGAAGAATATAAGAATTGCAGTGTCGTTGCCCGCT
GCTTCTTCTTTGCTTCTGCTCTACGCTTTCACTCTCAATCCTTTTTGCTTAGTATACAACTTCAAACTCTCCTCCTCTTTGCTTCAATCGTTTTCTTCTCCGGTGTTCTT
CGTTGAGAACTTGCATATGGATGATCGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTGCCACAATTTGGAGACTGGGACCAGAAGGGACAGCTGCCTGATTACTCGCTTG
ATTTCTCAAAACTTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCTCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCAAAGCCGCACCCCCAACGACAACA
GACACTTTCCCTACTGATAATCATCACCCTTATCATCAGAATCACCACTCCCCACCAACAAGAAAGAGCATTTTAAGTTGCTTCAACTGCTGCGTGAAAGCTTGAATTAA
GTAAAAGATCTGTCTTGAAGATGACCTCTGCAGGCCCACTTGTAAGTTTAAATGTCATTGTATTAATTGCTTTGGTACGAATACCTCTATTCTCCTTTATTTGAATTAGA
ACAATTGTATTATATGTTTGGATTTTGTATGATGGCTTTGTTCTTGCCAGTGGCAGCAGCTACTGTTTCATTATTTTTGTCTCTAATTAATCCATTAGTTATAGAATCCA
TTTGGAATGACTCTCTCGAGGATCTGGAATCTTAAACATTTAGTCTGCTTAAGCCCACTTCAGTCTCGAACACCCTAATGAGGGGCAATTTGAATTGCACCATTGGAGTG
GGTTATCGTAGCACATTTCATGTTTTGGGCAGTAATCTGTACAACTATAACATACAAGTATAGTAAAT
Protein sequenceShow/hide protein sequence
MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPTRKSILSCFNCCVKA