CuGenDBv2

Gene ID	CSPI06G27480
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	transmembrane protein 220
Genome location	Chr6:24144632..24145991
RNA-Seq Expression	CSPI06G27480
Synteny	CSPI06G27480
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029377 - TMEM220 protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004141949.1 transmembrane protein 220 isoform X2 [Cucumis sativus]

1.4e-86

98.79

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK
        TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVK+ K
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK

XP_008440175.1 PREDICTED: transmembrane protein 220 [Cucumis melo]

1.6e-82

96.36

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK
        TGSGLVVCSMILHLIAASSSSPKLR T  SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVK+ K
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK

XP_022962868.1 uncharacterized protein LOC111463236 [Cucurbita moschata]

3.4e-64

75.76

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSL+ +  +AKA +G+GICLWVKVVAED++NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK
        TGSGLVV SM+LHLIA SSSS + R     K +RVF R+++YG+A LVAFSYGLPIFFFL++  K
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK

XP_031742851.1 transmembrane protein 220 isoform X1 [Cucumis sativus]

4.3e-75

95.45

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGL
        TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYG A    FS  L
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGL

XP_038881310.1 transmembrane protein 220 isoform X2 [Benincasa hispida]

1.4e-70

85.89

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CS+LMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKW VS+EAM +VAKA MG GICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSK-SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVK
        TGSGLVVCSMILHLIAASSSS    R  + SKSKR FPR+LTYG+A LVAFSYGLPIFF + K
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSK-SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KI28 Uncharacterized protein

7.0e-87

98.79

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK
        TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVK+ K
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK

A0A1S3B186 transmembrane protein 220

8.0e-83

96.36

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK
        TGSGLVVCSMILHLIAASSSSPKLR T  SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVK+ K
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK

A0A5D3CNK6 Transmembrane protein 220

8.0e-83

96.36

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK
        TGSGLVVCSMILHLIAASSSSPKLR T  SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVK+ K
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK

A0A6J1HG20 uncharacterized protein LOC111463236

1.7e-64

75.76

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSL+ +  +AKA +G+GICLWVKVVAED++NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK
        TGSGLVV SM+LHLIA SSSS + R     K +RVF R+++YG+A LVAFSYGLPIFFFL++  K
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK

A0A6J1KP55 uncharacterized protein LOC111497019

6.3e-64

76.36

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSLE +  VAKA +G+GICLWVKVVAED+++GIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK
        TGSGLVV SM+LHLIA SSSS + R     K +RVF R++++G+A LVAFSYGLPIFFFLV+  K
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK

SwissProt top hits

e value

%identity

Alignment

Q6QAJ8 Transmembrane protein 220

7.1e-04

30.25

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Query:  LYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTG---S
        L+ +C+ LM   FA +  VQ NDPD  +WV +Y     + LL   ++ E   NV   ++     L+  V A     G+A +L     + ++ E+ G   S
Subjt:  LYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTG---S

Query:  GLVVCSMILHLIAASSSSP
        GLV+ +  + L  +SS +P
Subjt:  GLVVCSMILHLIAASSSSP

Q8BP07 Transmembrane protein 220

3.2e-04

29.51

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Query:  LYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGI---CLWVKVVAEDYMNGIAGFLSLDLSERVVREKTG-
        L+ +C+ LM   FA +  VQ NDPD  LWV +Y     + LL     L   N + K+   + +    LW          G+A    L   + ++ E+ G 
Subjt:  LYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGI---CLWVKVVAEDYMNGIAGFLSLDLSERVVREKTG-

Query:  --SGLVVCSMILHLIAASSSSP
          SGLV+ +  + L  +SS +P
Subjt:  --SGLVVCSMILHLIAASSSSP

Arabidopsis top hits

e value

%identity

Alignment

AT2G23755.1 unknown protein

4.7e-35

46.06

Show/hide

Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA P  L+  CS+LM FLFAYS +VQ NDPDWY W PLY  AC VNL+ +   ++ M  + + A+ +G+ L VKV+AED +    G LSLDL+ RVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK
         GSGLV+ SM+L L A+SSSS                + + +G+   V F YGLP +FF +++ +
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK

Sequences

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CDS sequence

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ATGGCAACACCCTCCAAATTATACAGCAGCTGCTCTGTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTATGGGTTCC
ACTTTATGGCTGTGCTTGTGCTGTGAATCTTCTCAAATGGAACGTCTCTTTAGAAGCCATGAATAATGTTGCCAAGGCAGCAATGGGAGTTGGAATATGTTTGTGGGTGA
AGGTTGTAGCAGAGGATTATATGAATGGAATTGCAGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTGTGTGTTCCATG
ATTTTGCATCTGATAGCTGCATCTTCATCATCCCCAAAACTTCGTAGAACAAGTAAAAGTAAAAGTAAAAGGGTGTTTCCAAGACATCTCACATATGGAATAGCATGTTT
GGTGGCATTTAGTTATGGACTTCCCATTTTCTTCTTCTTGGTGAAAAGGGCAAAATGA

mRNA sequence

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Protein sequence

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MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSM
ILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKRAK

CSPI06G27480 (gene) of Cucumber (PI 183967) v1 genome