; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G27510 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G27510
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionHTH-type transcriptional regulator protein ptxE
Genome locationChr6:24175632..24176606
RNA-Seq ExpressionCSPI06G27510
SyntenyCSPI06G27510
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141948.1 uncharacterized protein LOC101203564 [Cucumis sativus]2.3e-78100Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
        MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE

XP_008440178.1 PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo]3.3e-7798.05Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQ+GQLYFALPLNRL+QPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
        MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE

XP_022963140.1 uncharacterized protein LOC111463438 [Cucurbita moschata]3.2e-7292.86Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAIND+EELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
        MKC  GDKC HRRRSVSP+VFTVEELKTRKR++AGR GAGGRKKFAANL AIPE
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE

XP_023518464.1 uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo]9.3e-7292.86Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI+DDEELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
        MKC  GDKC HRRRSVSPVVFTVEELKTRKR++AGR GAGGR KFAANL AIPE
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE

XP_038883003.1 uncharacterized protein LOC120074082 [Benincasa hispida]4.0e-7596.1Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLILHDGSLQEFSYPVKVSYVLQ NPSCFICNSDEMDFDDALSAI+DDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
        MKC GGDKC HRRRSVSPVVFTVEELKTRKRVAAGRGGAGGR+KFAANLMAIPE
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE

TrEMBL top hitse value%identityAlignment
A0A0A0KJB4 Uncharacterized protein1.1e-78100Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
        MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE

A0A1S3B0H3 uncharacterized protein LOC1034847211.6e-7798.05Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQ+GQLYFALPLNRL+QPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
        MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE

A0A5D3CRH4 HTH-type transcriptional regulator protein ptxE1.6e-7798.05Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQ+GQLYFALPLNRL+QPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
        MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE

A0A6J1HH54 uncharacterized protein LOC1114634381.6e-7292.86Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAIND+EELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
        MKC  GDKC HRRRSVSP+VFTVEELKTRKR++AGR GAGGRKKFAANL AIPE
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE

A0A6J1KPP1 uncharacterized protein LOC1114971501.5e-7089.61Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLIL+DG+LQEFSYPVKVSY+LQKNPSCFICNSDEMDFDDALSAI+D+EELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
        MKC  GDKC HRRRSVSPVVF +EELKTRKR++AGR GAGGR KFAANL AIPE
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein6.3e-1839.16Show/hide
Query:  MGICSSSES----TAVATAKLILHDGSLQEFSYPVKVSYVLQ----------KNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQA
        MG+C S       ++  TAK++  +G L+E+  PV  S VL+           + S F+CNSD + +DD + AI  DE LQ  Q+YF LP+++ +  L A
Subjt:  MGICSSSES----TAVATAKLILHDGSLQEFSYPVKVSYVLQ----------KNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQA

Query:  EEMAALAVKANSALMKCSGGDKCGHRRRS--VSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLM
         +MAALAVKA+ A+ K +G  K   RRRS  +SPVV T+ +     R+AA     GG    A N+M
Subjt:  EEMAALAVKANSALMKCSGGDKCGHRRRS--VSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLM

AT2G23690.1 unknown protein1.4e-4662.2Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSS EST VATAKLILHDG + EF+ PVKV YVLQKNP CFICNSD+MDFD+ +SAI+ DEE QLGQLYFALPL+ L   L+AEEMAALAVKA+SAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGG---DKCGHRRRSVSPVVFTVEEL-------KTRKRVAAGRGGAGGRKKFAANLMAIPE
        M+  G    DKC  RR+ VSPV+F+   +       +TR     G GG  GR+K+AA L  I E
Subjt:  MKCSGG---DKCGHRRRSVSPVVFTVEEL-------KTRKRVAAGRGGAGGRKKFAANLMAIPE

AT3G50800.1 unknown protein3.7e-3454.19Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MG C+S ES    TAKLIL DG+LQEFS PVKV  +LQKNP+ F+CNSD+MDFDDA+ A+   E+L+ G+LYF LPL  L  PL+A+EMAALAVKA+SAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAG-GRKKFAANLMAIPE
         K SGG    +    V      V  +K       G GG G GR+KF A L +I E
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAG-GRKKFAANLMAIPE

AT4G37240.1 unknown protein8.2e-4265.31Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MGICSSSEST VATAKLIL DG + EF+ PVKV YVL K P CFICNSD+MDFDDA++AI+ DEELQLGQ+YFALPL  L+QPL+AEEMAALAVKA+SAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGR---GGAGGRKK
        M+  GG   G RR+ V P+V      K R RV +G    G   GR+K
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGR---GGAGGRKK

AT5G66580.1 unknown protein3.3e-3554.04Show/hide
Query:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL
        MG C+S ES    +AKLIL DG+LQEFS PVKV  +LQKNP+ F+CNSDEMDFDDA+SA+  +EEL+ GQLYF LPL  L  PL+AEEMAALAVKA+SAL
Subjt:  MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSAL

Query:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVA-------AGRGGAGGRKKFAANLMAIPE
         K  G         S    V T E+   +K +A        GRG   G+++F ANL  I E
Subjt:  MKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVA-------AGRGGAGGRKKFAANLMAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTTGCAGTTCTTCGGAATCTACTGCCGTTGCCACTGCTAAATTGATCCTTCACGACGGAAGTCTGCAGGAATTTTCGTATCCGGTTAAAGTTTCGTACGTTCT
TCAAAAGAACCCGTCCTGCTTCATATGTAACTCCGACGAAATGGATTTCGACGATGCTTTGTCAGCCATTAACGACGACGAGGAGCTTCAACTTGGACAGCTGTATTTTG
CGCTGCCATTGAATAGGCTGAAGCAGCCGCTTCAGGCTGAAGAAATGGCGGCATTGGCTGTCAAGGCCAACTCTGCGCTAATGAAATGTAGCGGGGGAGATAAATGTGGC
CACCGACGGAGATCGGTGTCTCCGGTGGTTTTTACGGTTGAGGAACTGAAGACTCGTAAACGAGTGGCGGCCGGCCGTGGTGGCGCCGGTGGAAGAAAAAAGTTCGCGGC
GAATTTGATGGCGATCCCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
CCCCCACCTTCCTTATATATAAAGAACCACCAACGCGTCCTCTAATCCCTAACGCCTCCAATTCCGCCACCCGTTGTGTTCTCTCTAATTACCTCTGCCGTGCCTCGCCG
CCGTTAATGGGTATTTGCAGTTCTTCGGAATCTACTGCCGTTGCCACTGCTAAATTGATCCTTCACGACGGAAGTCTGCAGGAATTTTCGTATCCGGTTAAAGTTTCGTA
CGTTCTTCAAAAGAACCCGTCCTGCTTCATATGTAACTCCGACGAAATGGATTTCGACGATGCTTTGTCAGCCATTAACGACGACGAGGAGCTTCAACTTGGACAGCTGT
ATTTTGCGCTGCCATTGAATAGGCTGAAGCAGCCGCTTCAGGCTGAAGAAATGGCGGCATTGGCTGTCAAGGCCAACTCTGCGCTAATGAAATGTAGCGGGGGAGATAAA
TGTGGCCACCGACGGAGATCGGTGTCTCCGGTGGTTTTTACGGTTGAGGAACTGAAGACTCGTAAACGAGTGGCGGCCGGCCGTGGTGGCGCCGGTGGAAGAAAAAAGTT
CGCGGCGAATTTGATGGCGATCCCCGAGTAGGGTCCTTTTTGGAAAATGTGATGGGCTTGTTGTGTAAATAACGGAAAACAGGGGCTTCGTGGTTTAGGTTTTTTTATTT
GTTTTTTCTTTTAAAAAAAAAAAGAAGACAAAAAACAAAAACAAAACAATTGGACATTTGGACCTGTTTATTATTATTTTAAAAGTAGCACTAGCAGAATAGGGCATCCC
ACAAATGAAAAAGATAAATGTAGATTAGTCCATCTCATTTATCTTTGATGAGACTTCACATATTTTGATGACACCTTTTGGAGGTTGATCTTACAATTTTACCCCCATTT
CTTATAAAATATATATACATTATGGAAACTCTATGTCCAAAATTGACTCAATAGATAAACCCAAATTACTATCTAAAACAAAAAAGTTGATGTGT
Protein sequenceShow/hide protein sequence
MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCG
HRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE