; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G28070 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G28070
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionATP-dependent RNA helicase eIF4A isoform X2
Genome locationChr6:24540939..24544227
RNA-Seq ExpressionCSPI06G28070
SyntenyCSPI06G28070
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12893.1 ATP-dependent RNA helicase FAL1 isoform X2 [Cucumis melo var. makuwa]3.9e-10597.09Show/hide
Query:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
        MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKFSSLSEEKCE EKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

XP_004141918.1 eukaryotic initiation factor 4A-I isoform X3 [Cucumis sativus]3.1e-110100Show/hide
Query:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
        MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
Subjt:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

XP_008440274.1 PREDICTED: eukaryotic initiation factor 4A-I isoform X1 [Cucumis melo]1.2e-10696.68Show/hide
Query:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
        MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKFSSLSEEKCE EKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

XP_008440275.1 PREDICTED: ATP-dependent RNA helicase FAL1 isoform X2 [Cucumis melo]2.0e-10496.6Show/hide
Query:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
        MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKFSSLSEEKCE EKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

XP_031742372.1 ATP-dependent RNA helicase eIF4A isoform X1 [Cucumis sativus]2.9e-10899.52Show/hide
Query:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
        MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
Subjt:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINI
        AEMPIN+
Subjt:  AEMPINI

TrEMBL top hitse value%identityAlignment
A0A0A0KFR9 Uncharacterized protein1.5e-110100Show/hide
Query:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
        MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
Subjt:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

A0A1S3B0P7 eukaryotic initiation factor 4A-I isoform X15.9e-10796.68Show/hide
Query:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
        MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKFSSLSEEKCE EKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

A0A1S3B1C4 ATP-dependent RNA helicase FAL1 isoform X29.4e-10596.6Show/hide
Query:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
        MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKFSSLSEEKCE EKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

A0A5D3CLW0 ATP-dependent RNA helicase FAL1 isoform X21.9e-10597.09Show/hide
Query:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
        MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQKFSSLSEEKCE EKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

A0A6J1HF44 eukaryotic initiation factor 4A-I isoform X24.4e-10292.42Show/hide
Query:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ
        MAID  EAFSPPSH SSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELD+VCSAVSNL YISLASLYSDLAEADR+LILE FRQ
Subjt:  MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRWSQK +SLS++KCE E+ GEKSHMIVVTDACLPLLASGESPLSAHVLINYE+PTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

SwissProt top hitse value%identityAlignment
A7TK55 ATP-dependent RNA helicase eIF4A7.7e-1125.26Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV
        + FY+ V+  Q+K + L  L D      +   V+ C++R +++ +   ++  ++ +++S+YSDL + +R +I+++FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEI
             +++ TD    LLA G       ++INY++PT KE Y+ R+         G+ IN V   +V  ++ IE+     I E+P +++E+
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEI

O02494 Eukaryotic initiation factor 4A1.4e-1226.7Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV
        R FYV V++ ++KM+TL+ L +       +  ++ C++R  +D +   +    + + +S++ D+ + DR +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY++P   ETY+ R+         G+ IN V   ++V L+ IE      I EMP+ I++IL
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

Q4P331 ATP-dependent RNA helicase eIF4A3.4e-1124.61Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV
        + FYVAV++  +K++TL  L +          V+ C++R ++D +   +++  + ++++++ D+ +A R +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY++P+ +E Y+ R+         G+ IN V   +V  L+ IE+     I EMP+N+++++
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

Q5B948 ATP-dependent RNA helicase eIF4A1.7e-1023.56Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV
        + FY+AV++ ++K++TL  L +          V+ C++R ++D +   ++   + ++++++ D+ +A R +I+++FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY++P  +E Y+ R+         G+ IN V   +V  ++ IE+     I EMP+N+++++
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

Q6FQQ6 ATP-dependent RNA helicase eIF4A1.3e-1026.32Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV
        + FYV V+  QFK + L  L D      +   V+ C++R +++ +   ++  ++ +++S+YSDL + +R  I+++FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEI
             +++ TD    LLA G       ++INY++PT KE Y+ R+         G+ IN +V  +V  L+ +E+     I E+P +I  +
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEI

Arabidopsis top hitse value%identityAlignment
AT1G72730.1 DEA(D/H)-box RNA helicase family protein1.3e-0822.51Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV
        + FYV VD+ ++K+ETL  L +      S   V+  ++R ++D +   + +  + ++++ + D+ +  R +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++IN+++PT+ E Y+ R+         G+ IN +   +   +  I+    +V+ E+P N++++L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

AT3G13920.1 eukaryotic translation initiation factor 4A11.6e-0823.04Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV
        + FYV V++ ++K+ETL  L +      S   V+  ++R ++D +   + +  + ++++ + D+ +  R +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++IN+++PT+ E Y+ R+         G+ IN V   +   L  I++   +V+ E+P N++++L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

AT3G13920.3 eukaryotic translation initiation factor 4A11.6e-0823.04Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV
        + FYV V++ ++K+ETL  L +      S   V+  ++R ++D +   + +  + ++++ + D+ +  R +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL
             +++ TD    LLA G       ++IN+++PT+ E Y+ R+         G+ IN V   +   L  I++   +V+ E+P N++++L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL

AT4G37020.1 BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1)5.0e-7467.92Show/hide
Query:  IDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTT
        +D  EA S P  S S  SQQ HFY+AVDR QFKMET+V LL V GRRP LP+VVCCSSRDELD+VCS++S L YISLA+LYSDLA+ +R++++EKFRQ T
Subjt:  IDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTT

Query:  SRWSQKFSSLSEEKCEAEKVGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV
          W+Q+ +S+ EE  E  + G++   SH++VVTD CLPLL+SGES LSA VLINYE+PTKKETY RR+TTC AS GI+INMVVGGEV TLKS+EESSG++
Subjt:  SRWSQKFSSLSEEKCEAEKVGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV

Query:  IAEMPINISEIL
        IAEMPINISEIL
Subjt:  IAEMPINISEIL

AT4G37020.2 FUNCTIONS IN: molecular_function unknown6.1e-7266.83Show/hide
Query:  IDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTT
        +D  EA S P  S S  SQQ HFY+AVDR QFKMET+V LL V GRRP LP+VVCCSSRDELD+VCS++S L YISLA+LYSDLA+ +R++++EKFRQ T
Subjt:  IDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTT

Query:  SRWSQKFSSLSEEKCEAEKVGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV
          W+Q+ +S+ EE  E  + G++   SH++VVTD CLPLL+SGES LSA VLINYE+PTKKETY RR+TTC AS GI+INMVVGGEV TLKS+EESSG++
Subjt:  SRWSQKFSSLSEEKCEAEKVGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV

Query:  IAEMPINI
        IAEMPIN+
Subjt:  IAEMPINI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATCGATCCATTTGAAGCATTCTCGCCTCCCTCTCACTCATCTTCCCATTTCAGTCAACAGCGCCACTTCTATGTTGCCGTTGACAGGCTCCAGTTTAAGATGGA
AACCTTAGTGGGCCTGTTGGACGTGGCCGGTCGCCGTCCGTCGTTGCCGATGGTTGTGTGTTGTAGTTCTCGTGACGAACTCGATTCTGTCTGCTCCGCCGTCTCCAACC
TCCATTACATCTCATTGGCCTCTTTGTACAGTGACCTTGCCGAAGCAGACCGTTCACTGATTTTAGAGAAATTTCGGCAAACAACATCGAGGTGGAGCCAAAAGTTCAGT
TCTCTATCAGAAGAAAAATGTGAGGCTGAGAAAGTTGGAGAAAAATCTCACATGATTGTAGTAACAGACGCCTGCCTTCCACTTCTTGCTTCTGGGGAGTCACCTCTTTC
TGCCCACGTTTTGATAAATTATGAGATACCAACAAAGAAGGAAACATATATGAGGCGCATGACTACCTGCTCGGCTTCAGATGGGATCTTGATCAACATGGTTGTTGGGG
GAGAAGTGGTAACTCTCAAAAGCATTGAAGAAAGTAGTGGCCTTGTTATTGCTGAGATGCCCATTAATATTTCTGAAATTTTGTAA
mRNA sequenceShow/hide mRNA sequence
TTCTGAGATTTAAAATTAAAAGGAAAAGAAAAAACTAGTCATACCCACTGGCCAGGTGCGTCTTTTAAAGATCAAACTTTGGAAGCAAGCAGGCGAGAGCGCTGTGCTGT
AGCGCAGCGACCATGGCAATCGATCCATTTGAAGCATTCTCGCCTCCCTCTCACTCATCTTCCCATTTCAGTCAACAGCGCCACTTCTATGTTGCCGTTGACAGGCTCCA
GTTTAAGATGGAAACCTTAGTGGGCCTGTTGGACGTGGCCGGTCGCCGTCCGTCGTTGCCGATGGTTGTGTGTTGTAGTTCTCGTGACGAACTCGATTCTGTCTGCTCCG
CCGTCTCCAACCTCCATTACATCTCATTGGCCTCTTTGTACAGTGACCTTGCCGAAGCAGACCGTTCACTGATTTTAGAGAAATTTCGGCAAACAACATCGAGGTGGAGC
CAAAAGTTCAGTTCTCTATCAGAAGAAAAATGTGAGGCTGAGAAAGTTGGAGAAAAATCTCACATGATTGTAGTAACAGACGCCTGCCTTCCACTTCTTGCTTCTGGGGA
GTCACCTCTTTCTGCCCACGTTTTGATAAATTATGAGATACCAACAAAGAAGGAAACATATATGAGGCGCATGACTACCTGCTCGGCTTCAGATGGGATCTTGATCAACA
TGGTTGTTGGGGGAGAAGTGGTAACTCTCAAAAGCATTGAAGAAAGTAGTGGCCTTGTTATTGCTGAGATGCCCATTAATATTTCTGAAATTTTGTAAGGATGTCGGCTA
CAATGGAACATCTAAGGACAACACAGAAGGTTTTATTAGAAGGGGTTTTACCCCTACCAACTGATCATATTGATAGTTCTCAATGATAACTTATGTTGGTTGACGTGTAC
TTAAAGAGAGTTTTCCAGTGGACTATTTATCGTGAGGATGGAATGCTGAGATAATTTGGTGTTCAATCATTTTTGGTTCATTTTCCTTTTTACCAGTGTTTTTGAAAATC
AAGCTAAGTTTTAATTAAAAGAGAG
Protein sequenceShow/hide protein sequence
MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFS
SLSEEKCEAEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINISEIL