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CSPI06G28420 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G28420
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMRG domain-containing protein
Genome locationChr6:24820044..24823891
RNA-Seq ExpressionCSPI06G28420
SyntenyCSPI06G28420
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR016197 - Chromo-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027037.1 Protein MRG1 [Cucurbita argyrosperma subsp. argyrosperma]9.2e-2593.94Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYLVS
        MVNSSKDDAATDGDMSSG SPPSN+SLYSEGEKVLAYHGPRIYEAKVQ+VELRKKE+RYFLHYLVS
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYLVS
XP_008440326.1 PREDICTED: protein MRG1 [Cucumis melo]7.1e-2596.88Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        MVNSSKDDAATDGDMSSGDSPPSN+SLYSEGEKVLAYHGPRIYEAKVQKVELRKKE+RYFLHYL
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
XP_011657879.1 protein MRG1 [Cucumis sativus]6.4e-26100Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
XP_022132780.1 protein MRG1 isoform X2 [Momordica charantia]4.6e-2493.75Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        MVNSSKDD ATDGDMSSGDSPPSN+SLYSEGEKVLAYHGPRIYEAKVQ+VELRKKE+RYFLHYL
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
XP_038881659.1 protein MRG1 [Benincasa hispida]1.6e-2495.31Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        MVNSSKDDAATDGDMSSGDSPPSN+SLYSEGEKVLAYHGPRIYEAKVQ+VELRKKE+RYFLHYL
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
TrEMBL top hitse value%identityAlignment
A0A1S3B0U2 protein MRG13.4e-2596.88Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        MVNSSKDDAATDGDMSSGDSPPSN+SLYSEGEKVLAYHGPRIYEAKVQKVELRKKE+RYFLHYL
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
A0A5D3CNW9 Protein MRG13.4e-2596.88Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        MVNSSKDDAATDGDMSSGDSPPSN+SLYSEGEKVLAYHGPRIYEAKVQKVELRKKE+RYFLHYL
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
A0A6J1BTF5 protein MRG1 isoform X22.2e-2493.75Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        MVNSSKDD ATDGDMSSGDSPPSN+SLYSEGEKVLAYHGPRIYEAKVQ+VELRKKE+RYFLHYL
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
A0A6J1GFM6 protein MRG1-like1.9e-2392.19Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        MVNSSKDD AT+GDMS GDSPPSN+SLYSEGEKVLAYHGPRIYEAKVQKVELRKKE+RYFLHYL
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
A0A6J1HH91 protein MRG1-like4.9e-2493.75Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        MVNSSKDDAATDGDMSSG SPPSN+SLYSEGEKVLAYHGPRIYEAKVQ+VELRKKE+RYFLHYL
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
SwissProt top hitse value%identityAlignment
P60762 Mortality factor 4-like protein 11.7e-0552.78Show/hide
Query:  YSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHY
        + EGE+VL +HGP +YEAK  KV ++ K+ +YF+HY
Subjt:  YSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHY
Q5NVP9 Mortality factor 4-like protein 16.5e-0550Show/hide
Query:  YSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHY
        + EGE+VL +HGP +YEAK  KV ++ K+ +YF+H+
Subjt:  YSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHY
Q6AYU1 Mortality factor 4-like protein 11.7e-0552.78Show/hide
Query:  YSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHY
        + EGE+VL +HGP +YEAK  KV ++ K+ +YF+HY
Subjt:  YSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHY
Q94C32 Protein MRG17.4e-1767.69Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTS-LYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        M +SSK++ A+DGD +SG + PSN   L+SEGE+VLAYHGPR+Y AKVQKVELRKKE++YF+HYL
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTS-LYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
Q9UBU8 Mortality factor 4-like protein 11.7e-0552.78Show/hide
Query:  YSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHY
        + EGE+VL +HGP +YEAK  KV ++ K+ +YF+HY
Subjt:  YSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHY
Arabidopsis top hitse value%identityAlignment
AT1G02740.1 MRG family protein1.0e-0542.19Show/hide
Query:  SKDDAATDGDMSSGDSP----PSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        S  D  T+ D    D P    P+    + EGE+VLA H    YEAKV KVE +  E++YF+HY+
Subjt:  SKDDAATDGDMSSGDSP----PSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
AT4G37280.1 MRG family protein5.2e-1867.69Show/hide
Query:  MVNSSKDDAATDGDMSSGDSPPSNTS-LYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL
        M +SSK++ A+DGD +SG + PSN   L+SEGE+VLAYHGPR+Y AKVQKVELRKKE++YF+HYL
Subjt:  MVNSSKDDAATDGDMSSGDSPPSNTS-LYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAACTCCTCCAAGGACGACGCTGCCACCGACGGCGACATGTCCAGCGGCGATTCTCCACCCTCCAATACCAGTCTCTACTCCGAAGGCGAGAAGGTCCTTGCCTA
TCACGGCCCTCGCATCTATGAAGCCAAGGTTCAAAAAGTTGAGCTTAGGAAGAAGGAATTTAGATACTTTCTGCACTATCTAGTAAGTTTGACTTCTATGTTTTGGATAT
GTTAG
mRNA sequenceShow/hide mRNA sequence
GGGAAAAAAAAGACGAGAAAAAGGAAAAACAGCGGCGATGGCAGTTCCCGCTCTATTCCGCACTGGTCAGAGCGCCACGCGAGCTCACGAGGAAGTGGGCGAGCCTCCTA
TCTGGTTGCTTCTCTTGCTATCTCCGACTGTTCAAGAATGGTAAACTCCTCCAAGGACGACGCTGCCACCGACGGCGACATGTCCAGCGGCGATTCTCCACCCTCCAATA
CCAGTCTCTACTCCGAAGGCGAGAAGGTCCTTGCCTATCACGGCCCTCGCATCTATGAAGCCAAGGTTCAAAAAGTTGAGCTTAGGAAGAAGGAATTTAGATACTTTCTG
CACTATCTAGTAAGTTTGACTTCTATGTTTTGGATATGTTAGATATGATCTAAATGTGAGTATGTTGTTTAAGTGAAAAGTTTCTTCCCATGTTATTGACCGCTTCCAAT
TTGACATTTTGCAGGGCTGGAATAAAAAGT
Protein sequenceShow/hide protein sequence
MVNSSKDDAATDGDMSSGDSPPSNTSLYSEGEKVLAYHGPRIYEAKVQKVELRKKEFRYFLHYLVSLTSMFWIC