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CSPI06G28440 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G28440
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:24836787..24837089
RNA-Seq ExpressionCSPI06G28440
SyntenyCSPI06G28440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647506.1 hypothetical protein Csa_003725 [Cucumis sativus]5.2e-4797.03Show/hide
Query:  MPNLYSPPMLNPRISSFLLIILLIAAPRLFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGDPPIGDEGGGVAFTMASGPSRKGAG
        MPNLYSPPMLNPRISSFLLII LIAAPR FLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSG PPIGDEGGGVAFTMASGPSRKGAG
Subjt:  MPNLYSPPMLNPRISSFLLIILLIAAPRLFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGDPPIGDEGGGVAFTMASGPSRKGAG

Query:  H
        H
Subjt:  H

KAG6595007.1 hypothetical protein SDJN03_11560, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0752.69Show/hide
Query:  MLNPRISSFLLIILLIAAPRLFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGDPPIGDEGGGVAFTMASGPSRKGAGH
        M N + SS LLI+ LIAA    L VD RPLR GS    H + +N SAL     PET  AA+   DS     G  GGGV FT+ SGPSRKGAGH
Subjt:  MLNPRISSFLLIILLIAAPRLFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGDPPIGDEGGGVAFTMASGPSRKGAGH

KAG6604156.1 hypothetical protein SDJN03_04765, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1153.54Show/hide
Query:  NLYSPPMLNPRISSFLLIILLIAAPRLFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGDPPIGDEGGGVAFTMASGPSRKGAGH
        NL SP M   + SS LLI++L+AA R    VDCRPLR GS I+ H   +N SA+       ++ AA++P DSG    GD  GGVAFT+ASGPSRKGAGH
Subjt:  NLYSPPMLNPRISSFLLIILLIAAPRLFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGDPPIGDEGGGVAFTMASGPSRKGAGH

TYK12856.1 hypothetical protein E5676_scaffold255G004480 [Cucumis melo var. makuwa]1.5e-3384.16Show/hide
Query:  MPNLYSPPMLNPRISSFLLIILLIAAPRLFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGDPPIGDEGGGVAFTMASGPSRKGAG
        MPNL SP M N RISSFLLIILL+AAPR FL VDCRPLRPGSPIDRHHVH NASA+PH+  PETQKAATA IDSG   IGDEGGGVAFTMASGPSRKGAG
Subjt:  MPNLYSPPMLNPRISSFLLIILLIAAPRLFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGDPPIGDEGGGVAFTMASGPSRKGAG

Query:  H
        H
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A5D3CR30 Uncharacterized protein7.1e-3484.16Show/hide
Query:  MPNLYSPPMLNPRISSFLLIILLIAAPRLFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGDPPIGDEGGGVAFTMASGPSRKGAG
        MPNL SP M N RISSFLLIILL+AAPR FL VDCRPLRPGSPIDRHHVH NASA+PH+  PETQKAATA IDSG   IGDEGGGVAFTMASGPSRKGAG
Subjt:  MPNLYSPPMLNPRISSFLLIILLIAAPRLFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGDPPIGDEGGGVAFTMASGPSRKGAG

Query:  H
        H
Subjt:  H

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAATCTATATTCTCCGCCCATGCTCAACCCCCGGATTTCTTCTTTCCTTCTAATCATCCTCTTAATTGCCGCTCCACGCTTATTTCTCTATGTAGATTGCAGACC
CCTCCGCCCCGGTTCACCCATAGATCGCCACCATGTTCATGATAATGCCTCTGCTCTTCCCCACAACGCCCCCCCGGAAACACAAAAAGCAGCAACGGCGCCCATAGATT
CCGGTGACCCGCCGATCGGAGATGAAGGCGGTGGCGTAGCGTTTACTATGGCTTCGGGACCCAGCAGAAAGGGTGCTGGCCAT
mRNA sequenceShow/hide mRNA sequence
ATGCCGAATCTATATTCTCCGCCCATGCTCAACCCCCGGATTTCTTCTTTCCTTCTAATCATCCTCTTAATTGCCGCTCCACGCTTATTTCTCTATGTAGATTGCAGACC
CCTCCGCCCCGGTTCACCCATAGATCGCCACCATGTTCATGATAATGCCTCTGCTCTTCCCCACAACGCCCCCCCGGAAACACAAAAAGCAGCAACGGCGCCCATAGATT
CCGGTGACCCGCCGATCGGAGATGAAGGCGGTGGCGTAGCGTTTACTATGGCTTCGGGACCCAGCAGAAAGGGTGCTGGCCAT
Protein sequenceShow/hide protein sequence
MPNLYSPPMLNPRISSFLLIILLIAAPRLFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGDPPIGDEGGGVAFTMASGPSRKGAGH