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CSPI06G28580 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G28580
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGibberellin regulated protein
Genome locationChr6:24927256..24927688
RNA-Seq ExpressionCSPI06G28580
SyntenyCSPI06G28580
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026958.1 Snakin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-3986.32Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+SL+LSSF LQ+A ADSS TYAP   CDSKCG RCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_008440339.1 PREDICTED: peamaclein-like [Cucumis melo]1.5e-4394.74Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS+SVTLVLLS ILSSFFLQY TADSSTTYAP  VCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_031742787.1 peamaclein-like isoform X1 [Cucumis sativus]1.7e-47100Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_031742788.1 peamaclein-like isoform X2 [Cucumis sativus]7.9e-4597.89Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSVSVTLVLLSLILSSFFLQYATADSSTTYAP  VCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_038880848.1 peamaclein-like [Benincasa hispida]1.8e-4191.58Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS SV LVLLSLILSSF LQYA ADSSTTYAP  VCDSKCGVRCLNAGVKDRCLKYCG+CCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TrEMBL top hitse value%identityAlignment
A0A0A0KLG3 Uncharacterized protein8.2e-48100Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A1S3B1M5 peamaclein-like7.2e-4494.74Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS+SVTLVLLS ILSSFFLQY TADSSTTYAP  VCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A5D3CMS1 Peamaclein-like2.6e-3380Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS+SVTLVLLS ILSSFFLQY TADSSTTYAP+               VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1HEX9 peamaclein-like7.0e-3985.26Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+SL+LSSF LQ+A ADS  TYAP   CDSKCG RCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1KSF0 peamaclein-like3.5e-3884.21Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+SLILSSF L +A ADSS TY P   CDSKCG RCLNAGVKDRC+KYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

SwissProt top hitse value%identityAlignment
O80641 Gibberellin-regulated protein 82.3e-2355.79Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK V V   ++SL+L+S F   ++ADSS        C  KC VRC  AG  + CLKYC +CCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

O82328 Gibberellin-regulated protein 72.0e-2254.63Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYAT---ADSSTTYAP----------KGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLN
        MK +   LVL SL+L S  L  AT   A  S   AP          +  C  KC  RC  AG+KDRCLKYCG+CC+ C+CVPSGTYGNK EC CYRDKL+
Subjt:  MKSVSVTLVLLSLILSSFFLQYAT---ADSSTTYAP----------KGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLN

Query:  SKGKSKCP
        SKG  KCP
Subjt:  SKGKSKCP

P86888 Peamaclein3.6e-2476.27Show/hide
Query:  CDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        CDSKCGVRC  AG ++RCLKYCG+CC++C CVPSGTYGNK ECPCYRD  NSKG  KCP
Subjt:  CDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q8LFM2 Gibberellin-regulated protein 101.8e-2356.25Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  +V ++++SL+++S     +TADSS        C  KC VRC  AG +DRCLKYC +CC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q948Z4 Snakin-14.1e-2861.05Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   +TL+L++L+++   +Q       TT A    CDSKC +RC  AG+ DRCLKYCG+CC++CKCVPSGTYGNK ECPCYRDK NSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein3.8e-2153.76Show/hide
Query:  VSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        V V   ++SL+L+S F   ++ADSS        C  KC VRC  A    + CL+ C +CCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  VSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT1G10588.2 Gibberellin-regulated family protein4.9e-2153.76Show/hide
Query:  VSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        V V   ++SL+L+S F   ++ADSS        C  KC VRC  A    + CL+ C +CCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  VSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAG-VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G14900.1 Gibberellin-regulated family protein1.4e-2354.63Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYAT---ADSSTTYAP----------KGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLN
        MK +   LVL SL+L S  L  AT   A  S   AP          +  C  KC  RC  AG+KDRCLKYCG+CC+ C+CVPSGTYGNK EC CYRDKL+
Subjt:  MKSVSVTLVLLSLILSSFFLQYAT---ADSSTTYAP----------KGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLN

Query:  SKGKSKCP
        SKG  KCP
Subjt:  SKGKSKCP

AT2G39540.1 Gibberellin-regulated family protein1.6e-2455.79Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK V V   ++SL+L+S F   ++ADSS        C  KC VRC  AG  + CLKYC +CCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT5G59845.1 Gibberellin-regulated family protein1.3e-2456.25Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  +V ++++SL+++S     +TADSS        C  KC VRC  AG +DRCLKYC +CC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTGTTTCCGTCACTTTGGTTCTTCTTTCATTGATTCTGAGCTCATTCTTCCTCCAATATGCCACTGCTGATTCCTCTACAACCTATGCTCCAAAAGGTGTTTG
TGATTCAAAATGTGGGGTAAGATGCTTGAATGCAGGGGTGAAGGACAGGTGTTTGAAGTATTGTGGACTCTGCTGCCAACAGTGCAAGTGTGTGCCCTCTGGAACCTATG
GAAACAAATCAGAATGCCCTTGTTATAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTGTTTCCGTCACTTTGGTTCTTCTTTCATTGATTCTGAGCTCATTCTTCCTCCAATATGCCACTGCTGATTCCTCTACAACCTATGCTCCAAAAGGTGTTTG
TGATTCAAAATGTGGGGTAAGATGCTTGAATGCAGGGGTGAAGGACAGGTGTTTGAAGTATTGTGGACTCTGCTGCCAACAGTGCAAGTGTGTGCCCTCTGGAACCTATG
GAAACAAATCAGAATGCCCTTGTTATAGAGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA
Protein sequenceShow/hide protein sequence
MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPKGVCDSKCGVRCLNAGVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP