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CSPI06G28650 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G28650
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLate embryogenesis abundant protein
Genome locationChr6:24976335..24976878
RNA-Seq ExpressionCSPI06G28650
SyntenyCSPI06G28650
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12837.1 Late embryogenesis abundant protein, LEA-18 [Cucumis melo var. makuwa]1.1e-2687.8Show/hide
Query:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAAAT
        MEKR+ADQSQGQN+E  KSEREKERSE +PLESSPYVNY+DLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDAAA+
Subjt:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAAAT

XP_011657884.1 uncharacterized protein LOC105435909 [Cucumis sativus]2.2e-35100Show/hide
Query:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAATRR
        MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAATRR
Subjt:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAATRR

XP_016899224.1 PREDICTED: uncharacterized protein LOC107990449 [Cucumis melo]7.6e-2890.24Show/hide
Query:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAAAT
        MEKREADQSQGQN+E RKSEREKERSE +PLESSPYVNY+DLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDAAA+
Subjt:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAAAT

XP_023518886.1 uncharacterized protein LOC111782271 [Cucurbita pepo subsp. pepo]2.0e-2074.07Show/hide
Query:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAAT
        M+KREADQ + Q  E RKS  E+ER E IPLE+SPYVNY+DLEDYKNQAYG QGHL+PKP RGGGGG TDAPTLSGDA ++
Subjt:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAAT

XP_038883215.1 uncharacterized protein LOC120074234 [Benincasa hispida]3.0e-2482.72Show/hide
Query:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAAT
        M+KRE DQ Q Q +E RKS RE+ERSE IPLESSPYVNY+DLEDYK+QAYGTQGHLQPKPGRG GGGPTDAPTLSGDAAA+
Subjt:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAAT

TrEMBL top hitse value%identityAlignment
A0A0A0KGG1 Uncharacterized protein1.1e-35100Show/hide
Query:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAATRR
        MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAATRR
Subjt:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAATRR

A0A1S4DTA9 uncharacterized protein LOC1079904493.7e-2890.24Show/hide
Query:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAAAT
        MEKREADQSQGQN+E RKSEREKERSE +PLESSPYVNY+DLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDAAA+
Subjt:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAAAT

A0A5D3CLL7 Late embryogenesis abundant protein, LEA-185.3e-2787.8Show/hide
Query:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAAAT
        MEKR+ADQSQGQN+E  KSEREKERSE +PLESSPYVNY+DLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDAAA+
Subjt:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAAAT

A0A6J1HDU8 uncharacterized protein LOC1114630787.0e-1971.6Show/hide
Query:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAAT
        M+KREADQ + Q  E RKS  E+ER E IPLE+SPYVNY+DLEDYKNQAYG QGHL+ KP R GGGG TDAPTLSGDA ++
Subjt:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAAT

A0A6J1KLI9 uncharacterized protein LOC1114968241.4e-1973.17Show/hide
Query:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAAAT
        M+KREADQ + Q  E RKSE ++ER E IPLE+SPYVNY+DLEDYKNQAYG QGHL+PKP R GGGGG TDAPTLSGDA ++
Subjt:  MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAAAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 62.1e-0745.76Show/hide
Query:  KSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG
        + E ++ +++++    +PY++Y++LEDYK + YG QGH +PK G GGG   TDAPT SG
Subjt:  KSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG

AT2G23110.2 Late embryogenesis abundant protein, group 62.1e-0745.76Show/hide
Query:  KSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG
        + E ++ +++++    +PY++Y++LEDYK + YG QGH +PK G GGG   TDAPT SG
Subjt:  KSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG

AT2G23120.1 Late embryogenesis abundant protein, group 61.4e-0643.42Show/hide
Query:  EADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAA
        EA ++        + + E+ +  ++P + SPY+    LEDYK +AYG +GH +P PG GGG   TDAPT SGDA A
Subjt:  EADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAA

AT2G33690.1 Late embryogenesis abundant protein, group 68.7e-1463.79Show/hide
Query:  EKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAA
        + E  +E+PLE+SPY  YED+EDYK  AYGT GH   KPG   GGG TDAPT SGDAA
Subjt:  EKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGCGGGAGGCCGATCAGTCGCAGGGACAAAACAAGGAGATCAGGAAAAGCGAAAGGGAAAAGGAGAGATCAGAGGAAATTCCGTTGGAGAGCAGTCCGTACGT
GAATTATGAAGACTTGGAAGATTACAAAAACCAAGCCTACGGAACACAAGGCCATCTTCAGCCCAAGCCCGGCCGTGGCGGAGGCGGTGGCCCAACCGACGCCCCCACTC
TCTCCGGCGACGCCGCCGCGACACGTCGGTGA
mRNA sequenceShow/hide mRNA sequence
CCAATTAGTGGAAAAAAATGAAGAAGAACGTAACTTTGTGATCGAGAAGAAAAATGGAGAAGCGGGAGGCCGATCAGTCGCAGGGACAAAACAAGGAGATCAGGAAAAGC
GAAAGGGAAAAGGAGAGATCAGAGGAAATTCCGTTGGAGAGCAGTCCGTACGTGAATTATGAAGACTTGGAAGATTACAAAAACCAAGCCTACGGAACACAAGGCCATCT
TCAGCCCAAGCCCGGCCGTGGCGGAGGCGGTGGCCCAACCGACGCCCCCACTCTCTCCGGCGACGCCGCCGCGACACGTCGGTGATTAACCGCCAAGGAGTACCCTGAGA
AGACATTCGCTGGCGCTTTCTTTGGCCGTTCTGTTTTATTAAGGAATATTTATTTTGCTGTAGGCTGGGTCTTGTTAATGTGTAACCTTACAATGGGTAAGGTAATGAAT
GAAAACAGTTGGAATAATCGGAATGGTATTATTAAAAAATTGATGACACTTACTAAATAATGAAGAGCAATATGTCGGTGTGCATTATATCCTTTTAATTTGAT
Protein sequenceShow/hide protein sequence
MEKREADQSQGQNKEIRKSEREKERSEEIPLESSPYVNYEDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAAATRR