; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G28720 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G28720
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionribonuclease III domain-containing protein RNC1, chloroplastic
Genome locationChr6:25025663..25029862
RNA-Seq ExpressionCSPI06G28720
SyntenyCSPI06G28720
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0016075 - rRNA catabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR000999 - Ribonuclease III domain
IPR011907 - Ribonuclease III
IPR036389 - Ribonuclease III, endonuclease domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141878.1 ribonuclease III domain-containing protein RNC1, chloroplastic isoform X1 [Cucumis sativus]0.0e+0099.81Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
        MELSSSFVKLSSPS NYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE

Query:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
        CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
Subjt:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ

Query:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
        LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Subjt:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ

Query:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
Subjt:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

XP_008440359.1 PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic [Cucumis melo]0.0e+0097Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
        MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSS NLR+FAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDK+LA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
        ELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDK+IRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE

Query:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
        CEPRLRRQLEDVDYVSVEFEDKRI WQDM+SYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV DKIPDITEARNIELGLGLQ
Subjt:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ

Query:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
        LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Subjt:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ

Query:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        QALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

XP_022133289.1 ribonuclease III domain-containing protein RNC1, chloroplastic [Momordica charantia]7.2e-30594.76Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
        MELSSSFV+L+SP+PNYSFSSSLTPF  KI+PN+P FPNP+S NLR+FAVAVDPQQELPKNNPQRLLKELAERKRATSPKK+VPPRRFILRPPLDDK+LA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSD+YGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYVL
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
        ELALAEYFLQRYPRESPGPMRERVFALIGKR+LPKWIKAASLQNLIFPYDDMDK+IRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE

Query:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
        CEPRLRRQLEDVDYVSVEFEDK+I WQDMV+YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV+DKIPDITEARNIELGLGLQ
Subjt:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ

Query:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
        LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Subjt:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ

Query:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        QALHGLSY VYGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

XP_023543359.1 ribonuclease III domain-containing protein RNC1, chloroplastic-like [Cucurbita pepo subsp. pepo]4.6e-30494.19Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
        MELSS FVKLSSP+PN+SFSSSLTPF+VKIHPN+P   NPSS +LR+FAVAVDPQQELPKNNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDK+LA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDK++RKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE

Query:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
        CEPRLRRQLEDVDYVSVEFEDK+I WQDMV+YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PVTDKIP+ITEARNIELGLGLQ
Subjt:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ

Query:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
        LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLI+YSE+VQDAYENNRRLRNPATTAVQ
Subjt:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ

Query:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        QALHGLSY VYGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

XP_038883471.1 ribonuclease III domain-containing protein RNC1, chloroplastic [Benincasa hispida]0.0e+0097.75Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
        MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLR+FAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPP+RFILRPPLDDK+LA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDK+IRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE

Query:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
        CEPRLRRQLEDVDYVSVEFEDKRI WQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
Subjt:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ

Query:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
        LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Subjt:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ

Query:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        QALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

TrEMBL top hitse value%identityAlignment
A0A0A0KGG7 RNase III domain-containing protein0.0e+0099.81Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
        MELSSSFVKLSSPS NYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE

Query:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
        CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
Subjt:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ

Query:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
        LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Subjt:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ

Query:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
Subjt:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

A0A1S3B1J9 ribonuclease III domain-containing protein RNC1, chloroplastic0.0e+0097Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
        MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSS NLR+FAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDK+LA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
        ELALAEYFL RYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDK+IRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE

Query:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
        CEPRLRRQLEDVDYVSVEFEDKRI WQDM+SYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPV DKIPDITEARNIELGLGLQ
Subjt:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ

Query:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
        LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Subjt:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ

Query:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        QALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

A0A6J1BVK6 ribonuclease III domain-containing protein RNC1, chloroplastic3.5e-30594.76Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
        MELSSSFV+L+SP+PNYSFSSSLTPF  KI+PN+P FPNP+S NLR+FAVAVDPQQELPKNNPQRLLKELAERKRATSPKK+VPPRRFILRPPLDDK+LA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSD+YGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYVL
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
        ELALAEYFLQRYPRESPGPMRERVFALIGKR+LPKWIKAASLQNLIFPYDDMDK+IRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE

Query:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
        CEPRLRRQLEDVDYVSVEFEDK+I WQDMV+YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV+DKIPDITEARNIELGLGLQ
Subjt:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ

Query:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
        LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
Subjt:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ

Query:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        QALHGLSY VYGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

A0A6J1GEC3 ribonuclease III domain-containing protein RNC1, chloroplastic-like2.9e-30494.19Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
        MELSS FVKLSSP+PN+SFSSSLTPF+VKIHPN+P   NPSS  LR+FAVAVDPQQELPKNNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDK+LA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDK++RKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE

Query:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
        CEPRLRRQLEDVDYVSVEFEDK+I WQDMV+YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PVTDKIP+ITEARNIELGLGLQ
Subjt:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ

Query:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
        LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLI+YSE+VQDAYENNRRLRNPATTAVQ
Subjt:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ

Query:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        QALHGLSY VYGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

A0A6J1IRK8 ribonuclease III domain-containing protein RNC1, chloroplastic-like2.1e-30293.45Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA
        MELSS FVKLSSP+PN+SFSSSLTPF+VKIHPN+P   NPSS +LR+FAVAVDP+QELPKNNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDK+LA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWM+EYLLEAKQALGYPLEP DSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVL

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDK++RKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA+E
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKE

Query:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ
        CEPRLRRQLEDVDYVSVEFEDK+I WQDMV+YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PVTDKIP+ITEARNIELGLGLQ
Subjt:  CEPRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQ

Query:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ
        LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+YLHKLI+YSE+VQDAYENNRRLRNPATTAVQ
Subjt:  LCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQ

Query:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        Q+LHGLSY VYGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  QALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

SwissProt top hitse value%identityAlignment
A4IM67 Ribonuclease 31.3e-0932.54Show/hide
Query:  QFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREP
        Q + LL  AF H S      R     + RL FLG  VLEL +++Y  Q++P  S G + +   A++ + +L K+  A S   L+      +    + R  
Subjt:  QFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREP

Query:  PVKSVFWALFGAIYLCFGMPEVYRVL
         +  VF A  GA+YL  GM  V R L
Subjt:  PVKSVFWALFGAIYLCFGMPEVYRVL

A6YSL1 Ribonuclease III domain-containing protein RNC1, chloroplastic2.1e-23875.14Show/hide
Query:  SLTPFIVKIHPNHPIFPNPSSANLRVFAVAVD------PQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFP
        +LTP    +H         SS  +RV AVA D      P  E P N+P RLL+ELA+RK+A SPKKK PPRRFIL+PPLDD+RL  RFL+SPQL+LK+ P
Subjt:  SLTPFIVKIHPNHPIFPNPSSANLRVFAVAVD------PQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFP

Query:  LLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSY--GDDNPAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQR
        LLSSCLPS+ L+ AD+TWMDEYLLEAKQALGYPL PS++   GDD PA+ FD L YLAFQH  PS ERT+ RH+R+GHSRL+FLGQYVLELA  E+FLQR
Subjt:  LLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSY--GDDNPAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQR

Query:  YPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLED
        YPRESPGPMRERVFALIGK+ LP+W+KAASL NL+FPYDD+DK+IRKDREPP K+VFWA+FGAIYLCFGMPEVYRVLFE FGMDPD + C+P+LRRQLED
Subjt:  YPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLED

Query:  VDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKF
        VDYVSVEFE +++ WQD+ +Y+PP DALFAHPRLFRACVPPGMHRFRGNIWD+DSRP+VM  LGYPLP+ D+IP+ITEARNIELGLGLQLCFLHPSKHKF
Subjt:  VDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKF

Query:  EHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVY
        EHPRFCYERLEY+GQKIQD+VMAERLLMKHLDAPGRWL  KHRR LMNK+CGRYLR+++L   IIY E VQD +E+NRRLRNP+TT+VQQALHGL+Y VY
Subjt:  EHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVY

Query:  GKPDVRRIMFEVFDFEQIQPKAV
        GKPDVRR+MFEVFDFEQ+QPKAV
Subjt:  GKPDVRRIMFEVFDFEQIQPKAV

Q5L0Q3 Ribonuclease 39.6e-1032.26Show/hide
Query:  DTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPV
        + LL  AF H S      R +   + RL FLG  VLEL +++Y  Q++P  S G + +   A++ + +L K+  A S   L+      +    + R   +
Subjt:  DTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPV

Query:  KSVFWALFGAIYLCFGMPEVYRVL
          VF A  GA+YL  GM  V R L
Subjt:  KSVFWALFGAIYLCFGMPEVYRVL

Q8S1Z0 Ribonuclease III domain-containing protein RNC1, chloroplastic7.1e-23977.03Show/hide
Query:  LRVFAVAVD---------PQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMD
        +RV AVA D              P N+P RLL+ELAERK+A SPKKK PPRRFIL+PPLDD+RL +RFL+SPQL+LK+ PLLSSCLPS+ L+ AD+TWMD
Subjt:  LRVFAVAVD---------PQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMD

Query:  EYLLEAKQALGYPLEPSDSYGDDN----PAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIG
        EYLLEAKQALGYPL PS++ GD +    PA+ FD LLYLAFQH   SCERT+ RH+RSGHSRL+FLGQYVLELA  E+FLQRYPRESPGPMRERVFALIG
Subjt:  EYLLEAKQALGYPLEPSDSYGDDN----PAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPMRERVFALIG

Query:  KRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLEDVDYVSVEFEDKRIGWQDM
        KR +PKWIKAASL NL+FPYDD+DK+IRKDREPP K+VFWALFGAIYLCFGMPEVYRVLFE FGMDP+ + C+P+LRRQLEDVDYVSVEFE +++ WQD+
Subjt:  KRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLEDVDYVSVEFEDKRIGWQDM

Query:  VSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQ
         +Y+PP DALFAHPRLFRACVPPGMHRFRGNIWD+D+RP+VM  LGYPLP+ D+IP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFC ERLEY+GQKIQ
Subjt:  VSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQ

Query:  DIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQI
        D+VMAERLLMKHLDAPGRWL  KHRRLLMNK+CGRYLR+++LH  IIY E VQD +E+NRRLRNP+TTAVQQA+HGL+Y VYGKPDVRR+MFEVFDFEQ+
Subjt:  DIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQI

Query:  QPKAV
        QPKAV
Subjt:  QPKAV

Q9SZV0 Ribonuclease III domain-containing protein RNC1, chloroplastic3.9e-26181.02Show/hide
Query:  SSSFVKL-SSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAER
        SSS +++ SS +P  SFSSS++ F  K      I       NLR+ A      Q LP+++PQRLLKELA+RK AT PKKKVPP+RFILRPPLDDK+LAER
Subjt:  SSSFVKL-SSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAER

Query:  FLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLEL
        FLNSPQL+LKSFPLLSSCLPSS+LNNADKTW+DEYLLE KQALGY LEPS+S GDDNPAK FDTLLYLAFQHPSC+R +ARH+++GHSRL+FLGQYVLEL
Subjt:  FLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLEL

Query:  ALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECE
        AL E+FLQRYPRESPGPMRERVFALIGKR LPKWIKAASLQNLIFPYDDMDK+IRK+REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA EC+
Subjt:  ALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECE

Query:  PRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLC
        PR RRQLEDVDYVSVEFE K++GWQD+ +YKPPEDALFAHPRLFRACVPPGMHRFRGNIWD+DS+P+VMQ LGYPL + D+I +ITEARNIELGLGLQLC
Subjt:  PRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLC

Query:  FLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQA
        FLHPSKHKFEHPRFC+ERLEY+GQKIQDI MAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+ LH  IIYSE+V D YE+NRRLRNPATTAVQQA
Subjt:  FLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQA

Query:  LHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        +HGL+Y +YGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  LHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

Arabidopsis top hitse value%identityAlignment
AT2G48121.1 BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).1.7e-2282.46Show/hide
Query:  SEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        +E+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  SEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

AT2G48121.2 LOCATED IN: mitochondrion6.3e-3383.12Show/hide
Query:  MNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        MNKFCGRYLRE+ LH  IIYSE+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  MNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV

AT4G37510.1 Ribonuclease III family protein2.7e-26281.02Show/hide
Query:  SSSFVKL-SSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAER
        SSS +++ SS +P  SFSSS++ F  K      I       NLR+ A      Q LP+++PQRLLKELA+RK AT PKKKVPP+RFILRPPLDDK+LAER
Subjt:  SSSFVKL-SSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAER

Query:  FLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLEL
        FLNSPQL+LKSFPLLSSCLPSS+LNNADKTW+DEYLLE KQALGY LEPS+S GDDNPAK FDTLLYLAFQHPSC+R +ARH+++GHSRL+FLGQYVLEL
Subjt:  FLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLEL

Query:  ALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECE
        AL E+FLQRYPRESPGPMRERVFALIGKR LPKWIKAASLQNLIFPYDDMDK+IRK+REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDA EC+
Subjt:  ALAEYFLQRYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECE

Query:  PRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLC
        PR RRQLEDVDYVSVEFE K++GWQD+ +YKPPEDALFAHPRLFRACVPPGMHRFRGNIWD+DS+P+VMQ LGYPL + D+I +ITEARNIELGLGLQLC
Subjt:  PRLRRQLEDVDYVSVEFEDKRIGWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLC

Query:  FLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQA
        FLHPSKHKFEHPRFC+ERLEY+GQKIQDI MAERLLMKHLDAPG+WLQ KHRRLLMNKFCGRYLRE+ LH  IIYSE+V D YE+NRRLRNPATTAVQQA
Subjt:  FLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQA

Query:  LHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV
        +HGL+Y +YGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  LHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTTCTTCTTCTTTTGTTAAACTCTCATCCCCTTCTCCTAATTACTCTTTCTCATCTTCTTTAACCCCATTTATCGTTAAAATTCACCCCAATCATCCCATTTT
CCCCAACCCCTCGTCGGCTAATTTGCGTGTTTTTGCAGTTGCAGTTGACCCACAACAAGAACTCCCCAAAAACAATCCTCAGAGATTGCTCAAAGAGCTAGCGGAGCGAA
AACGAGCTACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCTTTAGATGATAAGAGATTAGCGGAAAGGTTTCTTAATAGCCCTCAATTAACT
CTCAAGTCATTCCCATTACTGAGTTCTTGTTTACCATCTTCGCGGCTTAACAATGCTGATAAAACTTGGATGGATGAGTACTTGCTGGAAGCTAAGCAAGCCCTTGGATA
TCCTCTTGAGCCATCCGATAGTTATGGAGACGACAATCCTGCGAAACAATTTGATACTTTGTTGTACTTGGCCTTTCAGCATCCCTCATGCGAAAGGACCAAGGCCCGGC
ACATAAGATCGGGGCATTCAAGGCTCTTTTTTTTGGGCCAATATGTACTCGAATTGGCGTTGGCGGAGTATTTTCTTCAGAGGTATCCTAGGGAATCGCCAGGTCCAATG
AGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCCAAGTGGATCAAAGCTGCTAGTTTACAGAATTTGATATTCCCATATGATGACATGGACAAGATAATTAG
GAAGGACCGGGAACCACCAGTGAAATCTGTATTTTGGGCTTTGTTTGGGGCAATATATTTATGTTTTGGAATGCCAGAAGTGTACCGGGTCCTTTTTGAGGTATTCGGAA
TGGATCCAGATGCAAAGGAATGTGAACCAAGGTTACGCAGGCAACTCGAAGATGTAGACTATGTTTCTGTTGAATTTGAAGACAAAAGGATCGGCTGGCAAGATATGGTC
TCCTATAAGCCTCCAGAAGATGCTCTATTTGCACACCCTAGGCTCTTTCGAGCTTGTGTCCCACCTGGCATGCATCGATTCCGAGGTAATATATGGGATTATGATAGCCG
ACCTCAAGTCATGCAAGCACTAGGATACCCTTTACCTGTTACTGATAAAATTCCTGACATCACGGAAGCAAGAAATATTGAACTTGGACTTGGACTGCAGCTTTGTTTTT
TGCACCCATCAAAACACAAGTTTGAGCACCCTCGTTTCTGCTATGAACGATTAGAATACCTCGGCCAAAAGATCCAGGATATCGTGATGGCGGAGAGACTGTTAATGAAA
CATTTAGATGCTCCTGGAAGGTGGTTGCAGGTGAAGCACCGGCGATTACTCATGAACAAGTTTTGCGGACGGTATTTGAGGGAAAGATATCTTCATAAACTTATCATCTA
TTCTGAAAAAGTTCAAGATGCATACGAGAACAATAGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCGTATGTAGTTTATGGAAAGC
CTGATGTGAGACGTATCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTATGA
mRNA sequenceShow/hide mRNA sequence
CAGGATTTTGTAATTGCTCTTCCGCCACACCTCCGCGCCTTATCCATTCCTCTTCAGTCTTCTACTCCCAAGTCCCAACCCCTCCCAAAACCCTGTGCATCAAAGGCCAA
AATATTCATCTTCCTAGCCAGGTTTTCCCCATCCTCAAACAGCCCATATCCAGTTCCTCGTAACCCAAGTTCTTCATGTTCGGCCCCTCGCCTTTCGAATAAACCCACCC
AGCATTATCTTCTCCATTCACAACCAATGGAACTTTCTTCTTCTTTTGTTAAACTCTCATCCCCTTCTCCTAATTACTCTTTCTCATCTTCTTTAACCCCATTTATCGTT
AAAATTCACCCCAATCATCCCATTTTCCCCAACCCCTCGTCGGCTAATTTGCGTGTTTTTGCAGTTGCAGTTGACCCACAACAAGAACTCCCCAAAAACAATCCTCAGAG
ATTGCTCAAAGAGCTAGCGGAGCGAAAACGAGCTACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCTTTAGATGATAAGAGATTAGCGGAAA
GGTTTCTTAATAGCCCTCAATTAACTCTCAAGTCATTCCCATTACTGAGTTCTTGTTTACCATCTTCGCGGCTTAACAATGCTGATAAAACTTGGATGGATGAGTACTTG
CTGGAAGCTAAGCAAGCCCTTGGATATCCTCTTGAGCCATCCGATAGTTATGGAGACGACAATCCTGCGAAACAATTTGATACTTTGTTGTACTTGGCCTTTCAGCATCC
CTCATGCGAAAGGACCAAGGCCCGGCACATAAGATCGGGGCATTCAAGGCTCTTTTTTTTGGGCCAATATGTACTCGAATTGGCGTTGGCGGAGTATTTTCTTCAGAGGT
ATCCTAGGGAATCGCCAGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCCAAGTGGATCAAAGCTGCTAGTTTACAGAATTTGATATTCCCA
TATGATGACATGGACAAGATAATTAGGAAGGACCGGGAACCACCAGTGAAATCTGTATTTTGGGCTTTGTTTGGGGCAATATATTTATGTTTTGGAATGCCAGAAGTGTA
CCGGGTCCTTTTTGAGGTATTCGGAATGGATCCAGATGCAAAGGAATGTGAACCAAGGTTACGCAGGCAACTCGAAGATGTAGACTATGTTTCTGTTGAATTTGAAGACA
AAAGGATCGGCTGGCAAGATATGGTCTCCTATAAGCCTCCAGAAGATGCTCTATTTGCACACCCTAGGCTCTTTCGAGCTTGTGTCCCACCTGGCATGCATCGATTCCGA
GGTAATATATGGGATTATGATAGCCGACCTCAAGTCATGCAAGCACTAGGATACCCTTTACCTGTTACTGATAAAATTCCTGACATCACGGAAGCAAGAAATATTGAACT
TGGACTTGGACTGCAGCTTTGTTTTTTGCACCCATCAAAACACAAGTTTGAGCACCCTCGTTTCTGCTATGAACGATTAGAATACCTCGGCCAAAAGATCCAGGATATCG
TGATGGCGGAGAGACTGTTAATGAAACATTTAGATGCTCCTGGAAGGTGGTTGCAGGTGAAGCACCGGCGATTACTCATGAACAAGTTTTGCGGACGGTATTTGAGGGAA
AGATATCTTCATAAACTTATCATCTATTCTGAAAAAGTTCAAGATGCATACGAGAACAATAGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGG
ACTTTCGTATGTAGTTTATGGAAAGCCTGATGTGAGACGTATCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTATGAGAATCTTTAAGGTAGATTG
TGAAAGGCGAAATAATTAATCTTCTCTTTTCTTTAGGAGTTTCTTTAAGCATATAATTGAAGTAGGTGTGCAAAATCTTGGCCAACAAGGAGAGCTGAGACAGCTTAACC
AAAGATGTTGTATTATTATGAGTGACCAATTAACTTTAAGCTACCAATAGAAGACAGATCTTAAGATTTATTGAAAGAAGATAAACCAAATTTAGACATTTAAAGGTACA
TAGGTGATAG
Protein sequenceShow/hide protein sequence
MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKRLAERFLNSPQLT
LKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQRYPRESPGPM
RERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLEDVDYVSVEFEDKRIGWQDMV
SYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMK
HLDAPGRWLQVKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRIMFEVFDFEQIQPKAV