; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G29480 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G29480
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionHydroxyproline-rich glycoprotein family protein
Genome locationChr6:25603993..25605666
RNA-Seq ExpressionCSPI06G29480
SyntenyCSPI06G29480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR037699 - Uncharacterized protein At5g65660-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143432.1 uncharacterized protein At5g65660 [Cucumis sativus]3.1e-6899.24Show/hide
Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
        MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDH HLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI

Query:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
Subjt:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
XP_008440504.1 PREDICTED: uncharacterized protein At5g65660 [Cucumis melo]4.7e-6494.7Show/hide
Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
        MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPLRD H LH QSPPSKSNPT DLEKNQRESLSVLMPGDSIPKFI
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI

Query:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        AMPCPREPLRPE IEVKVEKP+KPLRIAVPFY
Subjt:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
XP_022133072.1 uncharacterized protein At5g65660 [Momordica charantia]1.4e-5284.21Show/hide
Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF
        MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQ    H HLHL S PSKSNP   DLE NQR+SLSVLMPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP RPE I+VKVEKP KP RIAVPFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
XP_023518276.1 uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]1.1e-5282.71Show/hide
Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF
        ME+P+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRS++Q L   HHL L S PSKSNPT  DLEKNQRESLSV+MPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP RPE I+VKVEKP KP RIA+PFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
XP_038881262.1 uncharacterized protein At5g65660-like [Benincasa hispida]3.1e-5587.97Show/hide
Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKF
        MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPL D   LHL+S PSKSNPT  DLEKNQRESLSVLMPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP R E IEVKVEKP KPLRIAVPFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
TrEMBL top hitse value%identityAlignment
A0A0A0KGL6 Uncharacterized protein1.5e-6899.24Show/hide
Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
        MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDH HLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI

Query:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
Subjt:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
A0A1S3B1W3 uncharacterized protein At5g656602.3e-6494.7Show/hide
Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
        MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPLRD H LH QSPPSKSNPT DLEKNQRESLSVLMPGDSIPKFI
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI

Query:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        AMPCPREPLRPE IEVKVEKP+KPLRIAVPFY
Subjt:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
A0A6J1BVL2 uncharacterized protein At5g656606.9e-5384.21Show/hide
Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF
        MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQ    H HLHL S PSKSNP   DLE NQR+SLSVLMPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP RPE I+VKVEKP KP RIAVPFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
A0A6J1HHX0 uncharacterized protein At5g65660-like7.6e-5281.95Show/hide
Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF
        ME+P+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRS++Q L   HHL L S PSKSN T  DLEKNQRESLSV+MPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP RPE I VKVEKP KP RIA+PFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
A0A6J1KQE2 uncharacterized protein At5g65660-like3.8e-5181.2Show/hide
Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF
        ME+P+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRS++Q L   HHL L S PSKSN T  DLEKNQRESLSV+MPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP RPE I+V VEKP KP RIA+PFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
SwissProt top hitse value%identityAlignment
Q9LSK9 Uncharacterized protein At5g656601.1e-3458.82Show/hide
Query:  NFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS--SSQPLRDHHHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKFIA
        +FSPPH D SRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS  + +P  D     ++S P K  P  P+++K Q  S+ VLMPGD+ PKFIA
Subjt:  NFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS--SSQPLRDHHHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKFIA

Query:  MPCPREPLRPETIEVKVE-----KPVKPLRIAVPFY
        +PCP  P RPE + V V+      PVKP R  VP Y
Subjt:  MPCPREPLRPETIEVKVE-----KPVKPLRIAVPFY
Arabidopsis top hitse value%identityAlignment
AT5G65660.1 hydroxyproline-rich glycoprotein family protein7.5e-3658.82Show/hide
Query:  NFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS--SSQPLRDHHHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKFIA
        +FSPPH D SRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS  + +P  D     ++S P K  P  P+++K Q  S+ VLMPGD+ PKFIA
Subjt:  NFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS--SSQPLRDHHHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKFIA

Query:  MPCPREPLRPETIEVKVE-----KPVKPLRIAVPFY
        +PCP  P RPE + V V+      PVKP R  VP Y
Subjt:  MPCPREPLRPETIEVKVE-----KPVKPLRIAVPFY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGTCCCAATTTCTCTCCCCCTCACTCCGACCCATCCCGACCCTCCTTAGGCTTTCCCCTCGGCACTGCTCTTCTCCTTCTCGTTATCTTCACCTTGAGCGGTAT
CTTCTCCTGTTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGTTCCTCTTCTCAACCCTTACGCGATCATCACCATCTTCACCTGCAATCACCTCCCTCCAAATCCA
ACCCTACTCCGGATTTGGAGAAGAACCAGAGAGAAAGCTTGTCGGTGTTGATGCCAGGGGATTCCATTCCGAAGTTTATTGCGATGCCTTGTCCTAGGGAACCGTTGCGG
CCGGAGACGATTGAGGTGAAAGTGGAGAAGCCGGTGAAGCCGCTGCGAATTGCGGTTCCTTTCTATTAG
mRNA sequenceShow/hide mRNA sequence
CAGTTTTATTGGGAGCCAGCCAACCCAAAGTGGCGTCCGTTGTTTCCCCCTGACCCTGAGTCTGGTGTGGCCCATTTATCAACTGGGCCTCTTCTCCCTCCCTTCCTTTC
ACTTTCTTCCACCCACTTTCCCCCCTCTGTCTCTCTATCTATCCTTTCCATCTCATACTCATTTCTCCCCACAACTTGCCACTTCCTAAATACAGATACATATCAGGATT
CACTATACTCCAAAGCACTTGATTTTGTTAATCACACTTCACTACAAACTACAAACCCAACTCGGTTTTCATCTACAGATGGTAAAGTCAAACAAAAGAGTGAAGCCAAA
TGGAGGGCAGTCACAGCAATTTGTCAATAATCCTAATCCCACACGGCATACATACGGCAGCAGCCTCTTTTGCTCTCTCCTTTGTTGCTATCTAAAATTCTCAAAAAGAA
ACTAAACAAATAAACAAAGAAACAACCGAATCATATATTGTAAGCATTTTTTGTACAGAAATTGAAAGTTAAAAGAAAAAAGAAAACCCAAAGAAATAGCTTTTTCTAAG
TGAGTGCAGGGTGCAGAGTGCAGAGTGCAGAGTGATGAGCAGCATTAGCACCAACACCGCTTGTGGGCTCCATATCTTTTTCCGTACTTAGCTGTACCTTTACATTGTAC
ACATACTTTTCTTCTTCTTCTTCTTCCTTCTCCCACTTCCCTCTGTTTTCCATTATTATATATTCCCCCAAATCCTCCCTCCCATTTCCTCATTCCATTCTTCTTTCCCC
TTCCCGATTTTGCTTTACTCATTTCCATGACAGATTCCACATGGAGAGTCCCAATTTCTCTCCCCCTCACTCCGACCCATCCCGACCCTCCTTAGGCTTTCCCCTCGGCA
CTGCTCTTCTCCTTCTCGTTATCTTCACCTTGAGCGGTATCTTCTCCTGTTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGTTCCTCTTCTCAACCCTTACGCGAT
CATCACCATCTTCACCTGCAATCACCTCCCTCCAAATCCAACCCTACTCCGGATTTGGAGAAGAACCAGAGAGAAAGCTTGTCGGTGTTGATGCCAGGGGATTCCATTCC
GAAGTTTATTGCGATGCCTTGTCCTAGGGAACCGTTGCGGCCGGAGACGATTGAGGTGAAAGTGGAGAAGCCGGTGAAGCCGCTGCGAATTGCGGTTCCTTTCTATTAGC
TGCTTCAGATTCAGATTCAGATTCAGTTTCAGTTTCAGTTTCACCATTGATTGATGTGTATACATAGACAGTAGAAACAAATGAATTCTTTTCAGTTTCATCTGTTTTTC
TTTCCTTGTGAAAGGGAATTTCAATGGCTTCCAATTTCATTGTTGTGTATATTCCACAAGCGTTCATCACCAAGTTTGGTATCTGCCTTTGTGCAGTTACAAACTTACGG
AGGAAGAAAAGAAAAAAAGAGGAGCGTAATTATTATGAATTAAAAGCAGTTTATTTTATAAATGTTTTCCATCACTTTAATCCCTTTTTCATGTTTAACGAAATGATTTG
TGAAAGCAATTAAAAACAGAGCACTAACCAACCCGATG
Protein sequenceShow/hide protein sequence
MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHHHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLR
PETIEVKVEKPVKPLRIAVPFY