; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G29910 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G29910
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationChr6:25843824..25845406
RNA-Seq ExpressionCSPI06G29910
SyntenyCSPI06G29910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036333.1 uncharacterized protein E6C27_scaffold18G001320 [Cucumis melo var. makuwa]5.3e-5492.8Show/hide
Query:  MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEM
        MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYH RKNS+HIKPAAKA KELLEVNISIKMDGGTKMEI+ETKKEAP PESLRPRTSRSNT SRSVPEM
Subjt:  MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEM

Query:  KRLDWAKSLRSSAAPVPSLGKKRQV
        KRLDWAKSLRSSAAPVP +GKKR+V
Subjt:  KRLDWAKSLRSSAAPVPSLGKKRQV

XP_004143553.1 uncharacterized protein LOC101209623 isoform X1 [Cucumis sativus]1.8e-7899.38Show/hide
Query:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG
        MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHI PAAKAKKELLEVNISIKMDGG
Subjt:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG

Query:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV
        TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV
Subjt:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV

XP_008440564.1 PREDICTED: uncharacterized protein LOC103484942 [Cucumis melo]7.4e-7292.5Show/hide
Query:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG
        MSL  PSRSPHNNAHANMVK+EEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYH RKNS+HIKPAAKA KELLEVNISIKMDGG
Subjt:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG

Query:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV
        TKMEI+ETKKEAP PESLRPRTSRSNT SRSVPEMKRLDWAKSLRSSAAPVP +GKKR+V
Subjt:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV

XP_031742667.1 uncharacterized protein LOC101209623 isoform X2 [Cucumis sativus]6.5e-7698.12Show/hide
Query:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG
        MSLFPPSRSPHNNAHANM  MEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHI PAAKAKKELLEVNISIKMDGG
Subjt:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG

Query:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV
        TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV
Subjt:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV

XP_038883628.1 uncharacterized protein LOC120074545 [Benincasa hispida]9.4e-5179.33Show/hide
Query:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG
        MSL PPS SPH N HA +V++E+KGL+H  ISEEEMKIRREIENEIERDLEEEIKGGIYQ ALRL+RLY  RK S HIKP  K KK+LLEVNISIKMDGG
Subjt:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG

Query:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAP
        T MEI+ETKK AP PESLRPRTSRS+T + +VPEMKRLDWAKSLRSSAAP
Subjt:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAP

TrEMBL top hitse value%identityAlignment
A0A0A0KJZ6 Uncharacterized protein8.8e-7999.38Show/hide
Query:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG
        MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHI PAAKAKKELLEVNISIKMDGG
Subjt:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG

Query:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV
        TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV
Subjt:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV

A0A1S3B1F7 uncharacterized protein LOC1034849423.6e-7292.5Show/hide
Query:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG
        MSL  PSRSPHNNAHANMVK+EEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYH RKNS+HIKPAAKA KELLEVNISIKMDGG
Subjt:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG

Query:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV
        TKMEI+ETKKEAP PESLRPRTSRSNT SRSVPEMKRLDWAKSLRSSAAPVP +GKKR+V
Subjt:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV

A0A5D3CLA4 Uncharacterized protein2.6e-5492.8Show/hide
Query:  MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEM
        MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYH RKNS+HIKPAAKA KELLEVNISIKMDGGTKMEI+ETKKEAP PESLRPRTSRSNT SRSVPEM
Subjt:  MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEM

Query:  KRLDWAKSLRSSAAPVPSLGKKRQV
        KRLDWAKSLRSSAAPVP +GKKR+V
Subjt:  KRLDWAKSLRSSAAPVPSLGKKRQV

A0A6J1HHY9 uncharacterized protein LOC111463142 isoform X22.7e-4371.71Show/hide
Query:  PPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGGTKME
        PP+ SPH NAHA ++K+ EKGL H  ISEEEMKIRREIE EIERDLEEEIKGGIYQQALRL RLY  R  S  I P  K KKELLEVNISIKM+GGTKME
Subjt:  PPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGGTKME

Query:  IKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
        I    K+ P P S R RT+RS+T SR+VPE+KRLDW KSLRSSAAP P +GK
Subjt:  IKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK

A0A6J1KUF8 uncharacterized protein LOC1114972922.1e-4370.51Show/hide
Query:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG
        +SL PPS SPH N HA ++K+ EKGL H  ISEEEMKIRREIE EIERDLEEEIKGGIYQQALRL RLY  R  S  I P  K KKELLEVNISIKM+GG
Subjt:  MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGG

Query:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
        TKMEI    KE P P +   RT+RS+T SR+VPE+KRLDW KSLRSSAAP P +GK
Subjt:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26290.1 unknown protein4.9e-1346.32Show/hide
Query:  IISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAK-KELLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTS
        ++S++E +IR E+E EIER+LE E K GIY  AL+L RLY  R+    +   +  K K +LEVNI+IKM+G TK+EI E KKE    ++ +   S
Subjt:  IISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAK-KELLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTTTTCCCACCTAGTCGGTCTCCTCATAATAATGCTCATGCAAATATGGTAAAGATGGAGGAGAAGGGTTTAAAGCATGAAATTATTTCAGAGGAAGAGATGAA
AATCCGGCGAGAAATTGAGAATGAAATAGAGAGAGATTTGGAGGAAGAGATTAAGGGAGGGATATACCAACAAGCTCTCCGCCTTCACCGCCTTTATCACTTCCGGAAAA
ATTCCTCTCATATTAAGCCGGCGGCGAAAGCCAAGAAGGAGCTTTTGGAGGTAAATATCAGCATCAAAATGGATGGGGGGACTAAAATGGAAATAAAAGAGACAAAAAAG
GAGGCGCCGCAGCCGGAAAGTCTCCGACCGAGGACTTCCCGGTCCAACACTTTCTCTCGATCTGTCCCGGAGATGAAAAGGTTGGATTGGGCTAAGTCTCTCCGGTCGAG
TGCAGCGCCGGTGCCGTCTCTCGGAAAGAAACGTCAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
AACAACCTCCAAAAACCCATAAATTAAAACCCTTCAACTTCAACTTCAACCCCCAACATCCATCCATCCTAGGGTTGGCTGATATGTCACTTTTCCCACCTAGTCGGTCT
CCTCATAATAATGCTCATGCAAATATGGTAAAGATGGAGGAGAAGGGTTTAAAGCATGAAATTATTTCAGAGGAAGAGATGAAAATCCGGCGAGAAATTGAGAATGAAAT
AGAGAGAGATTTGGAGGAAGAGATTAAGGGAGGGATATACCAACAAGCTCTCCGCCTTCACCGCCTTTATCACTTCCGGAAAAATTCCTCTCATATTAAGCCGGCGGCGA
AAGCCAAGAAGGAGCTTTTGGAGGTAAATATCAGCATCAAAATGGATGGGGGGACTAAAATGGAAATAAAAGAGACAAAAAAGGAGGCGCCGCAGCCGGAAAGTCTCCGA
CCGAGGACTTCCCGGTCCAACACTTTCTCTCGATCTGTCCCGGAGATGAAAAGGTTGGATTGGGCTAAGTCTCTCCGGTCGAGTGCAGCGCCGGTGCCGTCTCTCGGAAA
GAAACGTCAGGTTTGATTGGAATAATATATATACTTCCGATACTTCCCAATATATGGTGTGCGTTGATAAGCCGACATGTC
Protein sequenceShow/hide protein sequence
MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHIKPAAKAKKELLEVNISIKMDGGTKMEIKETKK
EAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV