; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G30100 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G30100
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPolyadenylate-binding protein 2-like
Genome locationChr6:25977946..25981928
RNA-Seq ExpressionCSPI06G30100
SyntenyCSPI06G30100
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036316.1 polyadenylate-binding protein 2-like [Cucumis melo var. makuwa]2.6e-11299.06Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEEGDIDMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEA+QEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

KAG6594888.1 Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]6.1e-10693.4Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEEGD+DM+A DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQESKEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEA+QEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY GYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        R+RRPMRYMPYY
Subjt:  RFRRPMRYMPYY

KAG7026854.1 Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma]6.1e-10693.4Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEEGD+DM+A DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQESKEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEA+QEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY GYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        R+RRPMRYMPYY
Subjt:  RFRRPMRYMPYY

XP_004143458.1 polyadenylate-binding protein 3 isoform X1 [Cucumis sativus]5.1e-113100Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

XP_038882559.1 polyadenylate-binding protein 3-like isoform X2 [Benincasa hispida]6.3e-11197.64Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEEGDIDMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEA+QEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRY+PYMGYRSRRPYVPPYFYSPYGGYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KG83 RRM domain-containing protein2.5e-113100Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

A0A5A7T2C2 Polyadenylate-binding protein 2-like1.2e-11299.06Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEEGDIDMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEA+QEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

A0A6J1BTY4 polyadenylate-binding protein 3-like isoform X18.6e-10693.87Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEE D+DMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AVSQE+KEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEA+QEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY GYGK P
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRR M+YMPYY
Subjt:  RFRRPMRYMPYY

A0A6J1HIK8 polyadenylate-binding protein 3-like2.9e-10693.4Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEEGD+DM+A DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQESKEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEA+QEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY GYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        R+RRPMRYMPYY
Subjt:  RFRRPMRYMPYY

A0A6J1KVH8 polyadenylate-binding protein 3-like3.9e-10693.4Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEEGD+DMSA DD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDP G+AVSQESKEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEA+QEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY GYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        R+RRPMRYMPYY
Subjt:  RFRRPMRYMPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 22.1e-3251.72Show/hide
Query:  TDDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-
        +D DA+    KEL EMK+R+ EME EAA LR MQ +++ E  A+++          KE  D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF 
Subjt:  TDDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-

Query:  GHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQ-----RYNPYMGYRSRRPYVPPY
        GHPKGFAY+EF E   +  ALLLN + LH R LKV  KRTNVPGM +   +     R     GYR R     PY
Subjt:  GHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQ-----RYNPYMGYRSRRPYVPPY

Q28165 Polyadenylate-binding protein 26.0e-3246.38Show/hide
Query:  EEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSA----VSQESKEEADSRSVFVGNVDYACTPE
        EEEE      E  + EGD    A +D    EL+ +K R++EMEEEA  L+E+Q +VEK+M  +  P G+A    +S E K EAD+RS++VGNVDY  T E
Subjt:  EEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSA----VSQESKEEADSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGY
        E++ HF  CG+VNRVTIL DKF GHPKGFAY+EF + E+++ +L L+E+   GRQ+KV  KRTN PG+      R  P   YR+R           Y G+
Subjt:  EVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGY

Query:  GKTPRFR
           PR R
Subjt:  GKTPRFR

Q93VI4 Polyadenylate-binding protein 14.0e-6864.47Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------SATDDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSR
        +E+EHEVYGGEIP  EEG++D            +A  D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  VS   KEE DSR
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------SATDDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVE EA+Q +L+LNE+ELHGRQ+KV  KRTNVPGM+Q F  R  P+   R   P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP

Query:  YVPPYFYSPYGGYGKTPRFRRPMRYMPY
         VP  FY PY  YG+ PRFRRPMRY PY
Subjt:  YVPPYFYSPYGGYGKTPRFRRPMRYMPY

Q9FJN9 Polyadenylate-binding protein 23.5e-8877.83Show/hide
Query:  MEEEEHEVYGGEIP----------VEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MEEEEHEVYGGEIP              D+DM+A DDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  A +Q  KEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIP----------VEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVE EA+QEAL LNE+ELHGRQLKV QKRTNVPG+KQ+  +R+NPYMGYR RRP++ PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFY

Query:  SPYGGYGKTPRFRRPMRYMPY
        SPY GYGK PRFRRPMRYMPY
Subjt:  SPYGGYGKTPRFRRPMRYMPY

Q9LX90 Polyadenylate-binding protein 33.4e-9180.65Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYAC
        MEEEEHEVYGGEIP      V + DIDMSA D+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVE EA+QEAL LNE+ELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+VPPYFYSPY 
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG

Query:  GYGKTPRFRRPMRYMPY
        GYGK PRFRRPMRYMPY
Subjt:  GYGKTPRFRRPMRYMPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-9280.65Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYAC
        MEEEEHEVYGGEIP      V + DIDMSA D+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVE EA+QEAL LNE+ELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+VPPYFYSPY 
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG

Query:  GYGKTPRFRRPMRYMPY
        GYGK PRFRRPMRYMPY
Subjt:  GYGKTPRFRRPMRYMPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.1e-8479.8Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYAC
        MEEEEHEVYGGEIP      V + DIDMSA D+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVE EA+QEAL LNE+ELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+VPPYFYSPY 
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG

Query:  GYG
        GYG
Subjt:  GYG

AT5G51120.1 polyadenylate-binding protein 12.8e-6964.47Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------SATDDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSR
        +E+EHEVYGGEIP  EEG++D            +A  D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  VS   KEE DSR
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------SATDDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVE EA+Q +L+LNE+ELHGRQ+KV  KRTNVPGM+Q F  R  P+   R   P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP

Query:  YVPPYFYSPYGGYGKTPRFRRPMRYMPY
         VP  FY PY  YG+ PRFRRPMRY PY
Subjt:  YVPPYFYSPYGGYGKTPRFRRPMRYMPY

AT5G51120.2 polyadenylate-binding protein 15.2e-6354.72Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------SATDDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------
        +E+EHEVYGGEIP  EEG++D            +A  D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA Q                  
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------SATDDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------

Query:  -------------------DPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETE
                           +   S VS   KEE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVE EA+Q +L+LNE+E
Subjt:  -------------------DPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETE

Query:  LHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTPRFRRPMRYMPY
        LHGRQ+KV  KRTNVPGM+Q F  R  P+   R   P VP  FY PY  YG+ PRFRRPMRY PY
Subjt:  LHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTPRFRRPMRYMPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.5e-8977.83Show/hide
Query:  MEEEEHEVYGGEIP----------VEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV
        MEEEEHEVYGGEIP              D+DM+A DDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  A +Q  KEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIP----------VEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVE EA+QEAL LNE+ELHGRQLKV QKRTNVPG+KQ+  +R+NPYMGYR RRP++ PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFY

Query:  SPYGGYGKTPRFRRPMRYMPY
        SPY GYGK PRFRRPMRYMPY
Subjt:  SPYGGYGKTPRFRRPMRYMPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAGGAACACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGTGACATTGACATGTCTGCCACTGATGACGACGCCATCAAGGAGCTGGACGAGATGAA
GAAGAGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAAAAGGAAATGGGCGCTGTTCAAGATCCTGCTGGTTCGGCTGTAAGTC
AAGAAAGCAAAGAAGAGGCAGATTCGCGATCTGTATTTGTTGGCAACGTTGATTATGCGTGTACACCTGAAGAAGTACAGCAGCATTTCCAATCTTGTGGTACTGTCAAC
AGGGTTACTATTCTCACGGATAAATTTGGTCATCCCAAGGGCTTTGCTTATGTGGAGTTTGTTGAAGCCGAAGCTATTCAGGAGGCACTTCTTTTAAACGAGACAGAGTT
GCATGGAAGACAATTGAAGGTTCAACAAAAGCGTACAAATGTTCCTGGGATGAAGCAGTATTTTCCTCAACGTTACAATCCTTACATGGGATATCGATCCAGGAGGCCTT
ACGTGCCCCCTTATTTTTACTCACCATATGGAGGATATGGGAAAACACCCCGTTTCCGAAGGCCCATGCGATACATGCCATACTACTAG
mRNA sequenceShow/hide mRNA sequence
AGCAGTTTCATCTTACAATGCCAAATTCTAAACTTAAATTTTGACAATGTAACACAAACCCTAAGGCAATTCATTGGGATTAAAGAACTGTAACATAGAGGTGAGTGAGC
CAAAGATCCAAGTCTTTGGGCTGAGCTCTCATGGACTTGGGTTGACTCACGCTTGGGACCTTAACTAGCAGTCCTTTGAAACGAGTCTTTATAGCTGATTTATTGTTCAT
TATAAAATGGTCCACGGTTGGGCTCTATAGATTACCCTATATATCGATCGTATTGCGGAAGCCTGTTCGGACACAATTAGGAAGAACGGAAATGGAGGAAGAGGAACACG
AGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGTGACATTGACATGTCTGCCACTGATGACGACGCCATCAAGGAGCTGGACGAGATGAAGAAGAGATTGAAGGAGATG
GAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAAAAGGAAATGGGCGCTGTTCAAGATCCTGCTGGTTCGGCTGTAAGTCAAGAAAGCAAAGAAGAGGC
AGATTCGCGATCTGTATTTGTTGGCAACGTTGATTATGCGTGTACACCTGAAGAAGTACAGCAGCATTTCCAATCTTGTGGTACTGTCAACAGGGTTACTATTCTCACGG
ATAAATTTGGTCATCCCAAGGGCTTTGCTTATGTGGAGTTTGTTGAAGCCGAAGCTATTCAGGAGGCACTTCTTTTAAACGAGACAGAGTTGCATGGAAGACAATTGAAG
GTTCAACAAAAGCGTACAAATGTTCCTGGGATGAAGCAGTATTTTCCTCAACGTTACAATCCTTACATGGGATATCGATCCAGGAGGCCTTACGTGCCCCCTTATTTTTA
CTCACCATATGGAGGATATGGGAAAACACCCCGTTTCCGAAGGCCCATGCGATACATGCCATACTACTAGGAAGGGCCTTGCCCATAATTCAATTACGTTGTGAAACTAT
ATGTATGATTTTACTGTGGTTTAGATCCAATAGAACTATGGATTTGATTATCTTCAGCCTTTTTATTGCAATTACATCAAATGATCTAATGTATGAGATATGGTAATAGT
TCATCAGGAACCTATTTAGCATGTTCGATTGTTTAGGAGGTTTCTGGGGGAGATTGATGGTATGCTTGCATATTTCTGCCTCTATTATCTTCTCAAGTACTGGCTTTACT
CAGGGGACG
Protein sequenceShow/hide protein sequence
MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVN
RVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY