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CSPI06G31260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G31260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein pleiotropic regulatory locus 1
Genome locationChr6:26655953..26656177
RNA-Seq ExpressionCSPI06G31260
SyntenyCSPI06G31260
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025721.1 protein pleiotropic regulatory locus 1 [Cucumis melo var. makuwa]2.5e-2286.89Show/hide
Query:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIRCG
        SG DNGSLWFWDW TAYNFQ+SQT AQP SLDSEAGIYALSY+I GSRLVTCEADKT RCG
Subjt:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIRCG

KAF5941591.1 hypothetical protein HYC85_019233 [Camellia sinensis]7.3e-2283.33Show/hide
Query:  SSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        ++GGDNGSLWFWDWK+ +NFQQSQTI QP SLDSEAGIYALSYD+ GSRLVTCEADKTI+
Subjt:  SSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

KGN48861.1 hypothetical protein Csa_003772 [Cucumis sativus]3.7e-3498.65Show/hide
Query:  MKNESSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIRCGEKMKVLPL
        MKNESSGGDNG LWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIRCGEKMKVLPL
Subjt:  MKNESSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIRCGEKMKVLPL

XP_004150502.1 protein pleiotropic regulatory locus 1 [Cucumis sativus]7.3e-2283.33Show/hide
Query:  SSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        ++GGDNGSLWFWDWK+ +NFQQSQTI QP SLDSEAGIYALSYDI GSRL+TCEADKTI+
Subjt:  SSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

XP_008458420.1 PREDICTED: protein pleiotropic regulatory locus 1 [Cucumis melo]7.3e-2286.44Show/hide
Query:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        +GGDNGSLWFWDWK+ +NFQQSQTI QP SLDSEAGIYALSYDI GSRLVTCEADKTI+
Subjt:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

TrEMBL top hitse value%identityAlignment
A0A0A0KD37 WD_REPEATS_REGION domain-containing protein3.5e-2283.33Show/hide
Query:  SSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        ++GGDNGSLWFWDWK+ +NFQQSQTI QP SLDSEAGIYALSYDI GSRL+TCEADKTI+
Subjt:  SSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

A0A0A0KM95 Uncharacterized protein1.8e-3498.65Show/hide
Query:  MKNESSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIRCGEKMKVLPL
        MKNESSGGDNG LWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIRCGEKMKVLPL
Subjt:  MKNESSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIRCGEKMKVLPL

A0A1S3C7C3 protein pleiotropic regulatory locus 13.5e-2286.44Show/hide
Query:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        +GGDNGSLWFWDWK+ +NFQQSQTI QP SLDSEAGIYALSYDI GSRLVTCEADKTI+
Subjt:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

A0A5D3CQ93 Protein pleiotropic regulatory locus 11.2e-2286.89Show/hide
Query:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIRCG
        SG DNGSLWFWDW TAYNFQ+SQT AQP SLDSEAGIYALSY+I GSRLVTCEADKT RCG
Subjt:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIRCG

A0A7J7GNU8 WD_REPEATS_REGION domain-containing protein3.5e-2283.33Show/hide
Query:  SSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        ++GGDNGSLWFWDWK+ +NFQQSQTI QP SLDSEAGIYALSYD+ GSRLVTCEADKTI+
Subjt:  SSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

SwissProt top hitse value%identityAlignment
O13615 Pre-mRNA-splicing factor prp53.6e-1659.32Show/hide
Query:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        SG DNGS+ FWDWK+ + +Q+ Q++ QP SLDSEAGI+A S+D  G RL+TCEADK+++
Subjt:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

Q39190 Protein pleiotropic regulator PRL21.6e-1969.49Show/hide
Query:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        +GGD G LWFWDWK+ +NFQ+++TI QP SL+SEAGIYA  YD  GSRLVTCE DKTI+
Subjt:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

Q42384 Protein pleiotropic regulatory locus 13.8e-2174.58Show/hide
Query:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        +GGDNGS+WFWDWK+ ++FQQS+TI QP SL+SEAGIYA  YD  GSRLVTCEADKTI+
Subjt:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

Q4WT34 Pre-mRNA-splicing factor prp466.2e-1664.41Show/hide
Query:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        SGGDNGS+ FWDWKT Y FQ   T+AQP SLD+EAGI + ++D  G RL+T EADKTI+
Subjt:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

Q5BE22 Pre-mRNA-splicing factor prp462.0e-1461.02Show/hide
Query:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        SGGDNGS+ FWDWKT Y +Q   T AQP SL++EAGI   ++D  G RL+T EADKTI+
Subjt:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

Arabidopsis top hitse value%identityAlignment
AT3G16650.1 Transducin/WD40 repeat-like superfamily protein1.1e-2069.49Show/hide
Query:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        +GGD G LWFWDWK+ +NFQ+++TI QP SL+SEAGIYA  YD  GSRLVTCE DKTI+
Subjt:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR

AT4G15900.1 pleiotropic regulatory locus 12.7e-2274.58Show/hide
Query:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR
        +GGDNGS+WFWDWK+ ++FQQS+TI QP SL+SEAGIYA  YD  GSRLVTCEADKTI+
Subjt:  SGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGAACGAGTCAAGTGGAGGTGACAATGGTAGTTTATGGTTCTGGGATTGGAAGACTGCTTATAACTTTCAGCAATCACAAACAATTGCTCAACCTAGCTCGTT
GGATAGTGAAGCTGGGATTTATGCTCTCTCCTATGACATAGCTGGTTCGAGGCTTGTAACTTGTGAAGCCGATAAAACTATTAGATGTGGAGAGAAGATGAAAGTGCTAC
CCCTA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGAACGAGTCAAGTGGAGGTGACAATGGTAGTTTATGGTTCTGGGATTGGAAGACTGCTTATAACTTTCAGCAATCACAAACAATTGCTCAACCTAGCTCGTT
GGATAGTGAAGCTGGGATTTATGCTCTCTCCTATGACATAGCTGGTTCGAGGCTTGTAACTTGTGAAGCCGATAAAACTATTAGATGTGGAGAGAAGATGAAAGTGCTAC
CCCTA
Protein sequenceShow/hide protein sequence
MMKNESSGGDNGSLWFWDWKTAYNFQQSQTIAQPSSLDSEAGIYALSYDIAGSRLVTCEADKTIRCGEKMKVLPL