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CSPI06G31540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G31540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:26801640..26802183
RNA-Seq ExpressionCSPI06G31540
SyntenyCSPI06G31540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647602.1 hypothetical protein Csa_004179 [Cucumis sativus]1.2e-4093.81Show/hide
Query:  MKSERGSGVLLFLGIVLISIYLVEVEVEGKEVKSFKINESVGSTSNGWSDLNESLRGRNMTISGGKGGRNSSGEGHGGGGGGGGSDVGVRKKDTKHNKKH
        MKSERGSGVLLFLGIVLISIYL    VEGKEVKSFKINESVGSTSNGWSDLNESLRGRNMTISGGKGGRNSSGEGHGGGGGGGGSDVGVRKKDTKHNKKH
Subjt:  MKSERGSGVLLFLGIVLISIYLVEVEVEGKEVKSFKINESVGSTSNGWSDLNESLRGRNMTISGGKGGRNSSGEGHGGGGGGGGSDVGVRKKDTKHNKKH

Query:  GKSGNGGGGGNGG
        GKSGNGGGG   G
Subjt:  GKSGNGGGGGNGG

KAG6603927.1 hypothetical protein SDJN03_04536, partial [Cucurbita argyrosperma subsp. sororia]4.5e-1155.88Show/hide
Query:  MKSERGSGVLLFLGIVLISIYLVEVEVEGKEVKSFKINESVGSTSNGWSDLN------ESLRGRNMTISGGK----------GGRNSSGEGHGGGGGGG-
        M+  RG GVLL +GIVL S+YLVE       VK F+ +  VG+ SN WS L+        + GRN T++GG+          GG    G G GGGGGGG 
Subjt:  MKSERGSGVLLFLGIVLISIYLVEVEVEGKEVKSFKINESVGSTSNGWSDLN------ESLRGRNMTISGGK----------GGRNSSGEGHGGGGGGG-

Query:  ---GSDVGVRKKDTKHNKKHGKSGNGGGGGNGGGGG-----GGGAGGGGGGGGGGGNGKGYGWGGGSGGG
           GS VGVRKKDTKH+KKHGK GNGGGGG GGGGG     GGG GGGGGGGGGGG G G G GGG GGG
Subjt:  ---GSDVGVRKKDTKHNKKHGKSGNGGGGGNGGGGG-----GGGAGGGGGGGGGGGNGKGYGWGGGSGGG

XP_038882243.1 glycine-rich protein DOT1-like [Benincasa hispida]1.3e-2365.22Show/hide
Query:  MKSERGSGVLLFLGIVLISIYLVEVEVEGKEVKSFKINESVGSTSNGWSDLNES-----LRGRNMTISGGKGGRNSSGEGHGGGGGGGGSDVGVRKKDTK
        M  ERG GVLL +GIVLISIYL  VEVEGKEVK+F+ +E++G+TSN WS+ +ES     L GRN+T+SGGKGG NSSGEGHGGGGGG     GVRKKD K
Subjt:  MKSERGSGVLLFLGIVLISIYLVEVEVEGKEVKSFKINESVGSTSNGWSDLNES-----LRGRNMTISGGKGGRNSSGEGHGGGGGGGGSDVGVRKKDTK

Query:  HNKKH-------GKSGN-----GGGGGNGGGGGGGGAGGGGGGGGGGGNGKGYGWGGGSGG
        HNKKH       G++       GGGGG  GGGGGGG G GGGGGGGGGNG+G GWG GSGG
Subjt:  HNKKH-------GKSGN-----GGGGGNGGGGGGGGAGGGGGGGGGGGNGKGYGWGGGSGG

TrEMBL top hitse value%identityAlignment
A0A0A0KGL8 Uncharacterized protein5.5e-4792Show/hide
Query:  MKSERGSGVLLFLGIVLISIYLVEVEVEGKEVKSFKINESVGSTSNGWSDLNESLRGRNMTISGGKGGRNSSGEGHGGGGGGGGSDVGVRKKDTKHNKKH
        MKSERGSGVLLFLGIVLISIYL    VEGKEVKSFKINESVGSTSNGWSDLNESLRGRNMTISGGKGGRNSSGEGHGGGGGGGGSDVGVRKKDTKHNKKH
Subjt:  MKSERGSGVLLFLGIVLISIYLVEVEVEGKEVKSFKINESVGSTSNGWSDLNESLRGRNMTISGGKGGRNSSGEGHGGGGGGGGSDVGVRKKDTKHNKKH

Query:  GKSGN----GGGGGNGGGGGGGGAGGGGGGGGGGGNGKGYGWGGGSGGGV
        GKSGN    GGGGGNGGGGGGGGAGGGGGGGGGGGNGKGYGWGG    GV
Subjt:  GKSGN----GGGGGNGGGGGGGGAGGGGGGGGGGGNGKGYGWGGGSGGGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGCGAAAGGGGAAGTGGGGTTCTTTTGTTTCTTGGAATTGTGTTGATCAGCATTTACTTGGTTGAGGTTGAGGTTGAGGGGAAAGAGGTGAAGAGTTTTAAAAT
AAACGAGAGTGTTGGTAGTACATCCAATGGATGGTCTGATTTGAATGAAAGCCTAAGGGGAAGAAATATGACTATTAGTGGCGGCAAGGGTGGGCGGAACTCATCGGGTG
AGGGCCACGGAGGTGGTGGTGGAGGAGGGGGAAGTGATGTTGGGGTGAGAAAGAAAGATACAAAACATAATAAGAAGCATGGAAAAAGCGGAAATGGTGGTGGTGGGGGC
AATGGTGGCGGTGGAGGTGGAGGCGGCGCGGGCGGAGGTGGTGGAGGTGGAGGGGGAGGGGGAAATGGGAAAGGGTATGGATGGGGAGGAGGTAGTGGAGGTGGTGTTGA
GAACTATTTCTACTGTGTTTTGGACGAAGTGTTGCATGCTCAATATCCATTTAAACGACATGCTTGA
mRNA sequenceShow/hide mRNA sequence
TCCATCCAAGTTTGAATTTTGAAACAGATAAATCAGAATGAAGAGCGAAAGGGGAAGTGGGGTTCTTTTGTTTCTTGGAATTGTGTTGATCAGCATTTACTTGGTTGAGG
TTGAGGTTGAGGGGAAAGAGGTGAAGAGTTTTAAAATAAACGAGAGTGTTGGTAGTACATCCAATGGATGGTCTGATTTGAATGAAAGCCTAAGGGGAAGAAATATGACT
ATTAGTGGCGGCAAGGGTGGGCGGAACTCATCGGGTGAGGGCCACGGAGGTGGTGGTGGAGGAGGGGGAAGTGATGTTGGGGTGAGAAAGAAAGATACAAAACATAATAA
GAAGCATGGAAAAAGCGGAAATGGTGGTGGTGGGGGCAATGGTGGCGGTGGAGGTGGAGGCGGCGCGGGCGGAGGTGGTGGAGGTGGAGGGGGAGGGGGAAATGGGAAAG
GGTATGGATGGGGAGGAGGTAGTGGAGGTGGTGTTGAGAACTATTTCTACTGTGTTTTGGACGAAGTGTTGCATGCTCAATATCCATTTAAACGACATGCTTGA
Protein sequenceShow/hide protein sequence
MKSERGSGVLLFLGIVLISIYLVEVEVEGKEVKSFKINESVGSTSNGWSDLNESLRGRNMTISGGKGGRNSSGEGHGGGGGGGGSDVGVRKKDTKHNKKHGKSGNGGGGG
NGGGGGGGGAGGGGGGGGGGGNGKGYGWGGGSGGGVENYFYCVLDEVLHAQYPFKRHA