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CSPI06G32110 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G32110
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRSN1_7TM domain-containing protein
Genome locationChr6:27158952..27159564
RNA-Seq ExpressionCSPI06G32110
SyntenyCSPI06G32110
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025640.1 hypothetical protein E6C27_scaffold253G001330 [Cucumis melo var. makuwa]1.2e-6793.33Show/hide
Query:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN
        MHH ATKSNLVDSDLETNQ GFKDNNGLPLCPKPRRLEPAIPSFL PL CAHHIHSQSSGDSRSE+LNIIEGKNVE RDC SSGCYPSCYSGSPPGRTEN
Subjt:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN

Query:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT
        PLVHDMYFLHQMEI S FSRTNLSDKFNLTSASPT
Subjt:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT

KAG6594753.1 hypothetical protein SDJN03_11306, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4375.21Show/hide
Query:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN
        MHH A KSNLVDS  ET      D+N  PLCPKPRRL PAIPSFLAP  CAH IHSQSS D RS ILNII GK VEGRDCL   CYPSCYSGSPPGRT N
Subjt:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN

Query:  PLVHDMYFLHQMEIHSPFSRT
        PLV D+YFLHQ+EI SPFSRT
Subjt:  PLVHDMYFLHQMEIHSPFSRT

XP_022133306.1 uncharacterized protein LOC111005918 [Momordica charantia]1.4e-4774.26Show/hide
Query:  MH-HRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTE
        MH H ATKSNLVDS  ETN     + N LPLCPKPRR  P IP+FL PL CA  IHSQSSG+ R+ ILNII GKNVEGRDCL S CYPSCYSGSPP RTE
Subjt:  MH-HRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTE

Query:  NPLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT
        NPLVHD+YFLHQME+ SPFS T LS+KF+LTSASPT
Subjt:  NPLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT

XP_031743884.1 uncharacterized protein LOC116404717 [Cucumis sativus]3.9e-74100Show/hide
Query:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN
        MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN
Subjt:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN

Query:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT
        PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT
Subjt:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT

XP_038881848.1 uncharacterized protein LOC120073212 [Benincasa hispida]3.1e-6387.41Show/hide
Query:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN
        M+H ATKSNLVDS L+T+Q GFKDNN LPLCPKPRRLEP IPSFLAPL CAHH+HSQSSGD+RS ILNII GK+VEGRDCL SGCYPSCYSGSPPGRTEN
Subjt:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN

Query:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT
        PLVHD+YFLHQMEIHSPFSRTNLSDKF+LTSASPT
Subjt:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT

TrEMBL top hitse value%identityAlignment
A0A0A0KHD1 Uncharacterized protein1.9e-74100Show/hide
Query:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN
        MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN
Subjt:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN

Query:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT
        PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT
Subjt:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT

A0A2C9WEC2 Uncharacterized protein8.3e-3861.19Show/hide
Query:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN
        M+H   KSNLVDS  +T + GF+ NN  PLCPKPRRL P IP FL    C    HSQ   D R+ ILN+I  K ++GR+ + SGC PSCYSGSPPGRT+N
Subjt:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN

Query:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASP
        PLVHD++F+HQME+ SPF+RT LSDKF  TSASP
Subjt:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASP

A0A2I4FDA1 uncharacterized protein LOC1089977102.4e-3762.22Show/hide
Query:  MHHRA-TKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTE
        MHH A  KSNLVDS  ETN    + NN  PLCPKPRRL  AIP FL P  C+   HSQ + D R +ILNII  KN +GR+ + +GC PSC+ GSPPGRT 
Subjt:  MHHRA-TKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTE

Query:  NPLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASP
        NPLVHD+ F+HQME+ SPF+RT LSDKF  TSASP
Subjt:  NPLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASP

A0A5D3CKV6 Uncharacterized protein5.9e-6893.33Show/hide
Query:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN
        MHH ATKSNLVDSDLETNQ GFKDNNGLPLCPKPRRLEPAIPSFL PL CAHHIHSQSSGDSRSE+LNIIEGKNVE RDC SSGCYPSCYSGSPPGRTEN
Subjt:  MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTEN

Query:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT
        PLVHDMYFLHQMEI S FSRTNLSDKFNLTSASPT
Subjt:  PLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT

A0A6J1BUP6 uncharacterized protein LOC1110059186.8e-4874.26Show/hide
Query:  MH-HRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTE
        MH H ATKSNLVDS  ETN     + N LPLCPKPRR  P IP+FL PL CA  IHSQSSG+ R+ ILNII GKNVEGRDCL S CYPSCYSGSPP RTE
Subjt:  MH-HRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTE

Query:  NPLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT
        NPLVHD+YFLHQME+ SPFS T LS+KF+LTSASPT
Subjt:  NPLVHDMYFLHQMEIHSPFSRTNLSDKFNLTSASPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCATAGAGCAACCAAGAGCAATCTTGTTGATTCAGATCTTGAAACAAATCAACATGGTTTCAAAGACAATAATGGTCTCCCTCTATGCCCCAAGCCTCGTCGTCT
CGAGCCTGCCATCCCAAGTTTCCTTGCCCCTCTCATATGCGCCCATCACATTCACAGCCAATCAAGTGGCGATTCAAGAAGTGAGATTCTCAATATCATCGAAGGAAAGA
ATGTTGAAGGGAGAGATTGCTTGTCCTCCGGTTGCTACCCATCGTGTTATTCAGGTTCTCCGCCAGGAAGAACAGAGAATCCACTGGTTCATGACATGTATTTTCTTCAT
CAAATGGAGATTCATTCCCCATTTTCAAGGACCAACCTTTCGGATAAGTTCAACCTGACCTCAGCCTCACCTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCATAGAGCAACCAAGAGCAATCTTGTTGATTCAGATCTTGAAACAAATCAACATGGTTTCAAAGACAATAATGGTCTCCCTCTATGCCCCAAGCCTCGTCGTCT
CGAGCCTGCCATCCCAAGTTTCCTTGCCCCTCTCATATGCGCCCATCACATTCACAGCCAATCAAGTGGCGATTCAAGAAGTGAGATTCTCAATATCATCGAAGGAAAGA
ATGTTGAAGGGAGAGATTGCTTGTCCTCCGGTTGCTACCCATCGTGTTATTCAGGTTCTCCGCCAGGAAGAACAGAGAATCCACTGGTTCATGACATGTATTTTCTTCAT
CAAATGGAGATTCATTCCCCATTTTCAAGGACCAACCTTTCGGATAAGTTCAACCTGACCTCAGCCTCACCTACATGA
Protein sequenceShow/hide protein sequence
MHHRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSSGDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTENPLVHDMYFLH
QMEIHSPFSRTNLSDKFNLTSASPT