; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G32460 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G32460
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionheterogeneous nuclear ribonucleoprotein H2 isoform X1
Genome locationChr6:27319231..27321618
RNA-Seq ExpressionCSPI06G32460
SyntenyCSPI06G32460
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134826.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus]1.8e-147100Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_008440908.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo]2.3e-14799.62Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_022133202.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Momordica charantia]4.1e-14497.72Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGS+QVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDR+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_023544122.1 heterogeneous nuclear ribonucleoprotein H-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-14397.34Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGS+QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIYDNDY+GSPPPRQKR SDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        E+RIHIASRPDGKATGEAYVEFAS E+AKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_038882740.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Benincasa hispida]4.0e-14799.62Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVA+EVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

TrEMBL top hitse value%identityAlignment
A0A0A0KJN7 RRM domain-containing protein8.6e-148100Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A1S4DTH1 heterogeneous nuclear ribonucleoprotein H2 isoform X11.1e-14799.62Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1BYF3 heterogeneous nuclear ribonucleoprotein H2 isoform X12.0e-14497.72Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGS+QVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDL 
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDR+HIASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1EFC5 heterogeneous nuclear ribonucleoprotein H2-like isoform X15.8e-14497.34Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSST GFQPYGYGSFPPTHAFPVVRLRGLPFNC+DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSV KS+IIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        EDRIHIASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIGSRYVELFPST NEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1IJJ3 heterogeneous nuclear ribonucleoprotein H-like isoform X19.8e-14497.34Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGY+VGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        VVFAGS+QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIY+NDY+GSPPPRQKR SDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        E+RIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  EDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

SwissProt top hitse value%identityAlignment
P52597 Heterogeneous nuclear ribonucleoprotein F4.7e-2636.14Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      +D         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q3US41 Epithelial splicing regulatory protein 14.7e-2635.58Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG
        VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR + +MG RY+EV++   +D+        N           
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG

Query:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPN
               +F  K   E   I+++RGLPF+ T   ++ FFG+       ++ I   + PDG+ TG+A+V FA  E A+ A+ K K  +G RY+ELF ST  
Subjt:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPN

Query:  EARRAESR
        E ++  +R
Subjt:  EARRAESR

Q5E9J1 Heterogeneous nuclear ribonucleoprotein F3.6e-2636.63Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      +D         ++LRGLPF  TK  II+FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q60HC3 Heterogeneous nuclear ribonucleoprotein F4.7e-2636.14Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      +D         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F4.7e-2636.14Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      +D         ++LRGLPF  TK  I++FF   ++  + I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Arabidopsis top hitse value%identityAlignment
AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.5e-6245.49Show/hide
Query:  GSGGVSDGYEVGSKRQRMME---PNPYFAV-SSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG
        G G   DG E+G KRQRM++   P P++    SS   + PYG+ + PP   FP VRLRGLPF+C ++D+ +FF GLD+VDVL V++N +  GEAF V   
Subjt:  GSGGVSDGYEVGSKRQRMME---PNPYFAV-SSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG

Query:  SVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIY--------------------------DNDYHGSPPPR---QKRFSD--KDQMEYTE
         +QV+FALQ++RQNMGRRYVEVFR  +Q+YY A+A EV    ++                               GS P R   + R SD  K+ +E+T 
Subjt:  SVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIY--------------------------DNDYHGSPPPR---QKRFSD--KDQMEYTE

Query:  ILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR
        IL+LRGLPFS  K +I++FF +F+L+ED +H+    +G+ TGEA+VEF +AE+++ AM KD+ T+GSRY+ELFPS+  E   A SR R
Subjt:  ILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR

AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.6e-0732.94Show/hide
Query:  LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR
        L + G+P+ +    + ++  +F   ED I +  R  G++ G  YV FASAE+AK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR

AT4G36960.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.6e-0732.94Show/hide
Query:  LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR
        L + G+P+ +    + ++  +F   ED I +  R  G++ G  YV FASAE+AK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR

AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-9867.79Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYG RGAM GSG    GYEVGSKRQRMM+ NPY AV +    F P+GY        FPVVRLRGLPFNC DIDIF+FFAGL+IVDVLLV+KNG+F GEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE
        VVFAG +QVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ +   SPPP    R KRFS+K+++EYTE+LK+RGLP+SV K  IIEFF  
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE

Query:  FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        + + + R+ +  RPDGKATGEA+VEF + EEA+RAM+KDKM+IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

AT5G66010.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.6e-5666.46Show/hide
Query:  VQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAED
        +QVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ +   SPPP    R KRFS+K+++EYTE+LK+RGLP+SV K  IIEFF  + + + 
Subjt:  VQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAED

Query:  RIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        R+ +  RPDGKATGEA+VEF + EEA+RAM+KDKM+IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  RIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGACCCAGAGGGGCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAG
CAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCATGCCTTCCCTGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATA
TTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTCGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGCTCTGTGCAGGTTGAG
TTCGCATTGCAACGGGATCGACAGAATATGGGACGTAGGTATGTAGAAGTCTTCAGGTGCAAAAGGCAGGATTATTACAACGCTGTTGCTGCAGAAGTAAATTATGAGGG
TATTTATGATAATGACTACCACGGAAGCCCTCCTCCTCGACAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACTGAGATACTGAAACTTCGTGGTCTCCCCTTCT
CTGTGACAAAATCCAACATCATTGAATTTTTCGGAGAGTTTGACCTTGCAGAAGATAGGATACATATTGCAAGTCGCCCAGATGGGAAGGCTACTGGGGAGGCCTATGTG
GAGTTTGCTTCAGCAGAGGAGGCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGATACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCAAGAAGAGC
TGAGTCAAGGTCAAGACAGTAA
mRNA sequenceShow/hide mRNA sequence
TGGAATCGGAAGCCAAAATCGAAGTTCAGAATCAATCCTTCGTAATCTTGAGTGTAGCTTTTGGAGATTCAACACAATCATGTACGGACCCAGAGGGGCAATGTTGGGAA
GCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTACGGC
TATGGGAGTTTTCCACCTACTCATGCCTTCCCTGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATATTTTCAAGTTCTTTGCTGGACTGGACATTGT
GGATGTGCTGCTCGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGCTCTGTGCAGGTTGAGTTCGCATTGCAACGGGATCGACAGAATATGG
GACGTAGGTATGTAGAAGTCTTCAGGTGCAAAAGGCAGGATTATTACAACGCTGTTGCTGCAGAAGTAAATTATGAGGGTATTTATGATAATGACTACCACGGAAGCCCT
CCTCCTCGACAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACTGAGATACTGAAACTTCGTGGTCTCCCCTTCTCTGTGACAAAATCCAACATCATTGAATTTTT
CGGAGAGTTTGACCTTGCAGAAGATAGGATACATATTGCAAGTCGCCCAGATGGGAAGGCTACTGGGGAGGCCTATGTGGAGTTTGCTTCAGCAGAGGAGGCAAAGAGAG
CAATGAGCAAGGACAAGATGACAATTGGATCGAGATACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCAAGAAGAGCTGAGTCAAGGTCAAGACAGTAAAGTAGGTAA
ACTTGGTCATGGAGTCTAAAAGGTTCTCTGTTGCTATATTTTTGTGCCGAGGCTTTGCCGTTCTTGTACTTTTTCCAGTTTGTAGGATGACTATCGATGTGGTATATTCT
CTGCAGTTTTTGCTGAAACTGTCGAGTAAATCGATACTGCATTTTGAGATTGAAATGTTAGTCTTATGGTTAAAACACTGATCTTCTTTTCCTTCTTTTTCCTATTTCAC
CGCATTTCGTTTTCCATTGAGGTACCCTTTCTTTGTAGGGTTTACTTCAAATATGCATGAGATTAGGAATTTAGGCTACAGTTGTTGGAATTCAATTACTCAAAGTACTG
CAAAAGGCCCATACATTAATGGTGTGGCAGTGGTTGACA
Protein sequenceShow/hide protein sequence
MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVE
FALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYV
EFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ