| GenBank top hits | e value | %identity | Alignment |
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| XP_004134991.2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 [Cucumis sativus] | 2.0e-112 | 99.09 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
MSEKGEKGFSVQK+PAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDA NTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
Query: SKLSEPINNVLSELAKVKSS
SKLSEPINNVLSELAKVKSS
Subjt: SKLSEPINNVLSELAKVKSS
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| XP_008440955.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform X1 [Cucumis melo] | 1.9e-110 | 96.36 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDA N+FSMKYSGKNGD+GKGGKGANTKAS+AKEPQ+LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYG+TDSEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
Query: SKLSEPINNVLSELAKVKSS
SKLSEP+NNVLSELAKVKSS
Subjt: SKLSEPINNVLSELAKVKSS
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| XP_008440960.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform X2 [Cucumis melo] | 5.7e-107 | 94.55 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKD GKDDSLSKLKKGRKVQFDAQGSVDA N+FSMKYSGKNGD+GKGGKGANTKAS+AKEPQ+LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYG+TDSEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
Query: SKLSEPINNVLSELAKVKSS
SKLSEP+NNVLSELAKVKSS
Subjt: SKLSEPINNVLSELAKVKSS
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| XP_011658103.1 DNA-directed RNA polymerases IV and V subunit 4 isoform X2 [Cucumis sativus] | 6.1e-109 | 97.27 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
MSEKGEKGFSVQK+PAKSSLKSSALKD GKDDSLSKLKKGRKVQFDAQGSVDA NTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
Query: SKLSEPINNVLSELAKVKSS
SKLSEPINNVLSELAKVKSS
Subjt: SKLSEPINNVLSELAKVKSS
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| XP_038881037.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Benincasa hispida] | 3.1e-105 | 93.18 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
MS+KGEKGF VQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDA +TFSMKYSGKNGDLGKGGKG NTKAS AKEPQ LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
KNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGLQYAKRANHYVN+ESVRPVLETLKK+G+T+SEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
Query: SKLSEPINNVLSELAKVKSS
SKLSEP+NNVL ELAKVKSS
Subjt: SKLSEPINNVLSELAKVKSS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KH45 RPOL4c domain-containing protein | 9.8e-113 | 99.09 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
MSEKGEKGFSVQK+PAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDA NTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
Query: SKLSEPINNVLSELAKVKSS
SKLSEPINNVLSELAKVKSS
Subjt: SKLSEPINNVLSELAKVKSS
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| A0A1S3B2C2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 | 9.2e-111 | 96.36 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDA N+FSMKYSGKNGD+GKGGKGANTKAS+AKEPQ+LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYG+TDSEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
Query: SKLSEPINNVLSELAKVKSS
SKLSEP+NNVLSELAKVKSS
Subjt: SKLSEPINNVLSELAKVKSS
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| A0A1S3B2C7 DNA-directed RNA polymerases IV and V subunit 4 isoform X2 | 2.8e-107 | 94.55 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKD GKDDSLSKLKKGRKVQFDAQGSVDA N+FSMKYSGKNGD+GKGGKGANTKAS+AKEPQ+LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYG+TDSEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKR
Query: SKLSEPINNVLSELAKVKSS
SKLSEP+NNVLSELAKVKSS
Subjt: SKLSEPINNVLSELAKVKSS
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| A0A6J1EJD9 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 | 1.3e-96 | 86.88 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGAN-TKASIAKEPQALELKIEQEL
MSEKGEKGF VQKKP KSSLKSSA KDASLKGKDDSLSK KKGRKVQFDAQGSVDA S+K+SGKNGDLGKGGKG N KAS++KE Q LELKIEQEL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGAN-TKASIAKEPQALELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRK
PKNVKCQCLMDCEAAQLLQGIQDQM LSADPTIKIPTSFDRGLQYAKRANHYVN E VRPVLETLKKYGV DSEICVIANVCPDTTDEVF+L+PSLK K
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRK
Query: RSKLSEPINNVLSELAKVKSS
RSKL+EP+NNVL ELAK+KSS
Subjt: RSKLSEPINNVLSELAKVKSS
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| A0A6J1KMD1 DNA-directed RNA polymerases IV and V subunit 4-like | 2.6e-97 | 87.78 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGAN-TKASIAKEPQALELKIEQEL
MSEKGEKGF VQKKP KSSLKS A KDASLKGKDDSLSK KKGRKVQFDAQGSVDA SMK+ GKNGDLGKGGKG N KAS++KE Q LELKIEQEL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAINTFSMKYSGKNGDLGKGGKGAN-TKASIAKEPQALELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRK
PKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGLQYAKRANHYVN ESVRPVLETLKKYGV DSEICVIANVCPDT DEVFAL+PSLK K
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRK
Query: RSKLSEPINNVLSELAKVKSS
RSKL+EP+NNVLSELAK+KSS
Subjt: RSKLSEPINNVLSELAKVKSS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O15514 DNA-directed RNA polymerase II subunit RPB4 | 7.2e-04 | 26.32 | Show/hide |
Query: QCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSE
+ L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L + + E+ +AN+CP+T +E AL+PSL+ + E
Subjt: QCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSE
Query: PINNVLSELAKVKS
+ +L ++ +S
Subjt: PINNVLSELAKVKS
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| O48890 DNA-directed RNA polymerase II subunit 4 | 2.5e-20 | 39.55 | Show/hide |
Query: KEPQALELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDT
+E A ELKI E +K +CLM+CE + +L+ +Q+ +S DP ++ F++ LQY KR + Y N ++VR V E L ++ +T+ E+CV+ N+CP+T
Subjt: KEPQALELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDT
Query: TDEVFALLPSLKRK-RSKLSEPINNVLSELAKVK
+E A++PSLK K R+ E I +L++L+ VK
Subjt: TDEVFALLPSLKRK-RSKLSEPINNVLSELAKVK
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 3.1e-07 | 29.53 | Show/hide |
Query: KASIAKEPQALELKIEQELPKNVKCQCLMDCEAAQLLQ---GIQDQ----------MVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKK
++ I +E LK ++L K+ K L++ E A LL+ GI + ++ L + I +F + L YA++ + Y N S++ V L K
Subjt: KASIAKEPQALELKIEQELPKNVKCQCLMDCEAAQLLQ---GIQDQ----------MVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKK
Query: YGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSEPINNVLSELAK
+ + EI +AN+CP+ +DE +L+PSLK+ + I + LS L K
Subjt: YGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSEPINNVLSELAK
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| Q6DBA5 DNA-directed RNA polymerases IV and V subunit 4 | 1.7e-37 | 45.29 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQ---GSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQ
MSEKG KG KSSLKS KD GKD S +KLKKGRK+ FD + + +N S + ++ K GK S + ELK
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQ---GSVDAINTFSMKYSGKNGDLGKGGKGANTKASIAKEPQALELKIEQ
Query: ELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLK
+LP+N +C+MDCEA Q+L GI+ Q+V LS DP+IKIP S+DR L Y + HY N +SVR VLE LK YG++D E+CVIAN ++ DEV A +PSLK
Subjt: ELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLK
Query: RKRSKLSEPINNVLSELAKVKSS
K+ +++P+ + L EL+K+K S
Subjt: RKRSKLSEPINNVLSELAKVKSS
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| Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 | 7.2e-04 | 26.32 | Show/hide |
Query: QCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSE
+ L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L + + E+ +AN+CP+T +E AL+PSL+ + E
Subjt: QCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSE
Query: PINNVLSELAKVKS
+ +L ++ +S
Subjt: PINNVLSELAKVKS
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