; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G32890 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G32890
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTPD1 protein homolog 1-like
Genome locationChr6:27529072..27530137
RNA-Seq ExpressionCSPI06G32890
SyntenyCSPI06G32890
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
GO:0009408 - response to heat (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12989.1 TPD1 protein-like protein 1-like isoform X2 [Cucumis melo var. makuwa]2.5e-5597.2Show/hide
Query:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
        MNRIGS C+K+DIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
Subjt:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS

Query:  VSSATCS
        VSSATCS
Subjt:  VSSATCS

XP_004134986.1 TPD1 protein homolog 1 isoform X2 [Cucumis sativus]3.5e-57100Show/hide
Query:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
        MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
Subjt:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS

Query:  VSSATCSS
        VSSATCSS
Subjt:  VSSATCSS

XP_008440086.1 PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo]5.6e-5597.2Show/hide
Query:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
        MNRIGS C+K DIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
Subjt:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS

Query:  VSSATCS
        VSSATCS
Subjt:  VSSATCS

XP_011658115.1 TPD1 protein homolog 1 isoform X3 [Cucumis sativus]3.5e-57100Show/hide
Query:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
        MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
Subjt:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS

Query:  VSSATCSS
        VSSATCSS
Subjt:  VSSATCSS

XP_031742589.1 TPD1 protein homolog 1 isoform X1 [Cucumis sativus]3.5e-57100Show/hide
Query:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
        MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
Subjt:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS

Query:  VSSATCSS
        VSSATCSS
Subjt:  VSSATCSS

TrEMBL top hitse value%identityAlignment
A0A0A0KL27 Uncharacterized protein1.7e-57100Show/hide
Query:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
        MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
Subjt:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS

Query:  VSSATCSS
        VSSATCSS
Subjt:  VSSATCSS

A0A1S3AZV4 TPD1 protein homolog 1-like isoform X12.7e-5597.2Show/hide
Query:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
        MNRIGS C+K DIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
Subjt:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS

Query:  VSSATCS
        VSSATCS
Subjt:  VSSATCS

A0A1S3B0B6 TPD1 protein homolog 1-like isoform X22.7e-5597.2Show/hide
Query:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
        MNRIGS C+K DIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
Subjt:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS

Query:  VSSATCS
        VSSATCS
Subjt:  VSSATCS

A0A5D3CRM1 TPD1 protein-like protein 1-like isoform X21.2e-5597.2Show/hide
Query:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
        MNRIGS C+K+DIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
Subjt:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS

Query:  VSSATCS
        VSSATCS
Subjt:  VSSATCS

A0A6J1GDB1 TPD1 protein homolog 1-like3.2e-4879.63Show/hide
Query:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS
        MNR+GS C+KD++++FQG   PLP GIP++IVQILNSC+S CSISNIH+KCGWFSSARLVNPRIF+RV YDDCL+NDG+ALGPG+TLSFQYANTFPYPLS
Subjt:  MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLS

Query:  VSSATCSS
        VSS TCSS
Subjt:  VSSATCSS

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058351.3e-0640Show/hide
Query:  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYD--DCLVNDGRALGPGRTLSFQYANTFPYPL
        V+++N C   C I N+ +KC  F  + LV+P   + +S    +C+VNDG  L P +TLSF Y+NT  + L
Subjt:  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYD--DCLVNDGRALGPGRTLSFQYANTFPYPL

Q1G3T1 TPD1 protein homolog 13.9e-4368.57Show/hide
Query:  NRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSV
        NRIG  C+KDDI++FQG   PLP G+P+Y V+I NSC SDC+I+ IHV CGWFSS RLVNPR+F+R+ YDDCLVNDG+ LGPG++LSFQYAN+F YPLSV
Subjt:  NRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSV

Query:  SSATC
        +S +C
Subjt:  SSATC

Q2QR54 TPD1 protein homolog 1A4.8e-3356.76Show/hide
Query:  RIGSRCA-KDDIIIFQGPATPLPGGIPTYIVQILNSCA------SDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTF
        R+   CA  DDI I+QG ATPLP G+P Y V ++N CA       +C+I+ IHV+CGWFSS  LV+PR+F+R+ +DDCL+NDGR L  G T+SF+Y N+F
Subjt:  RIGSRCA-KDDIIIFQGPATPLPGGIPTYIVQILNSCA------SDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTF

Query:  PYPLSVSSATC
        PY LSVS ATC
Subjt:  PYPLSVSSATC

Q6TLJ2 Protein TAPETUM DETERMINANT 13.0e-3560Show/hide
Query:  RIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVS
        RIG +C   DI++ Q    P+P GIP Y+V+I N C S C IS IH+ CGWFSSA+L+NPR+FKR+ YDDCLVN+G+ L  G TLSF YANTFPY LSV+
Subjt:  RIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVS

Query:  SATCS
          TC+
Subjt:  SATCS

Q8S6P9 TPD1 protein homolog 1B8.2e-2545.45Show/hide
Query:  CAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATC
        C++ +++++Q  A  LP GIPTY V+I+N C + C++ ++H+ CG F+SA LV+P  F+R+ ++DCLV  G  LGP   +SFQY+N+F YPL+V++  C
Subjt:  CAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATC

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein9.3e-0840Show/hide
Query:  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYD--DCLVNDGRALGPGRTLSFQYANTFPYPL
        V+++N C   C I N+ +KC  F  + LV+P   + +S    +C+VNDG  L P +TLSF Y+NT  + L
Subjt:  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYD--DCLVNDGRALGPGRTLSFQYANTFPYPL

AT1G32583.1 FUNCTIONS IN: molecular_function unknown2.8e-4468.57Show/hide
Query:  NRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSV
        NRIG  C+KDDI++FQG   PLP G+P+Y V+I NSC SDC+I+ IHV CGWFSS RLVNPR+F+R+ YDDCLVNDG+ LGPG++LSFQYAN+F YPLSV
Subjt:  NRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSV

Query:  SSATC
        +S +C
Subjt:  SSATC

AT4G24972.1 tapetum determinant 12.1e-3660Show/hide
Query:  RIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVS
        RIG +C   DI++ Q    P+P GIP Y+V+I N C S C IS IH+ CGWFSSA+L+NPR+FKR+ YDDCLVN+G+ L  G TLSF YANTFPY LSV+
Subjt:  RIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVS

Query:  SATCS
          TC+
Subjt:  SATCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGTATTGGTTCGAGATGTGCAAAAGACGATATCATTATATTTCAAGGCCCAGCAACTCCACTTCCGGGTGGGATCCCAACATACATAGTTCAGATCTTGAACTC
ATGTGCTTCAGACTGCAGCATCTCCAACATTCATGTGAAATGTGGATGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAAGCGAGTCAGTTATGATGACTGCC
TTGTCAATGATGGTCGGGCTCTTGGTCCTGGTCGAACTCTTTCTTTTCAATATGCTAATACTTTCCCTTACCCACTTTCTGTATCTTCTGCAACTTGTTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
CCCCACCCTCCCTCTTTCTCATCTTGATCCACCCAGTTTGAGCAATCCATATCCTCTCTTACACCTTACACCCTCCCCTTTAATGGCGTCCATCCACACTTCCCTCTCCA
TCTTTTCTTACTCCTTCTCTTACTCTTCTCTTCTCCCATCGAATTTTGCACCCACTTCATACAATATCCCCTAACTTAGTCAACCCGCTACCAGACTAGAAGAAGACACT
AACTATTCTTTGACTCATATAAACTATTTTGTTCACACGTGTGCTCACTCCATTCCTTTTAGATTCCTTGTAGCCTCTTCGTAAATGTCTTTTATATACTCCCCTTTTTA
AGCTAATTCTGAAACAAAGTGAACTCAGACATGAAAGGTGGTGGTGCTTTTCACACATTCTGCCTCTGGTTTCTCCTTACAATCTTTCTTGGTAATGGTAATACTCTTCT
TTCTCTTTTCTTCTATTCATCTCTAATCTGTTATCTACTGCATCTTCTTCCCCATCTGACTTACTTTTACACCCATCTTCTTCTTTTTCTTTTATCTTTTTGGGTGGATT
CAGAATTCAAGTTGGTTCATTTGAGAGTTCTTCAGGCAGCTGCAAGAGAAAACAGAAATGGGATTTCTTCGATGTCGCTTCAATCTTCTAACAGTGGTAACAAATTCATT
CTTACCTATGAAAATTAGATTGTTGTTCTTTACTTATATACCACGAATCTGTGTTCTAAATAGGTAAAGAGATGAATCGTATTGGTTCGAGATGTGCAAAAGACGATATC
ATTATATTTCAAGGCCCAGCAACTCCACTTCCGGGTGGGATCCCAACATACATAGTTCAGATCTTGAACTCATGTGCTTCAGACTGCAGCATCTCCAACATTCATGTGAA
ATGTGGATGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAAGCGAGTCAGTTATGATGACTGCCTTGTCAATGATGGTCGGGCTCTTGGTCCTGGTCGAACTC
TTTCTTTTCAATATGCTAATACTTTCCCTTACCCACTTTCTGTATCTTCTGCAACTTGTTCTTCTTAAATTAACAA
Protein sequenceShow/hide protein sequence
MNRIGSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSS