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CSPI06G33630 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G33630
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:27886460..27886822
RNA-Seq ExpressionCSPI06G33630
SyntenyCSPI06G33630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49119.1 hypothetical protein Csa_003853 [Cucumis sativus]2.4e-5399.11Show/hide
Query:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
        MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLK+LKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
Subjt:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ

Query:  TNFANFPVLLSS
        TNFANFPVLLSS
Subjt:  TNFANFPVLLSS
XP_008439979.1 PREDICTED: uncharacterized protein LOC103484604 [Cucumis melo]1.4e-4892.86Show/hide
Query:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
        MS VLTKR NGYCKVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG+RLKKLKKSAM SISTLK+GVYKQVITQIRN KSLFGRKQ
Subjt:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ

Query:  TNFANFPVLLSS
        T FANFPVLLSS
Subjt:  TNFANFPVLLSS
XP_022142336.1 uncharacterized protein LOC111012478 [Momordica charantia]2.8e-4181.25Show/hide
Query:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
        MS +L +R NGY KVDKEDPEEIIHRRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFGRRLKKLKKSA+ SIS  KIGVYKQVI Q+RNCKSLFGRK+
Subjt:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ

Query:  TNFANFPVLLSS
           AN    LSS
Subjt:  TNFANFPVLLSS
XP_023003962.1 uncharacterized protein LOC111497408 [Cucurbita maxima]7.8e-4484.82Show/hide
Query:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
        MS VL K SNGY KVDKEDPEEIIHRRAQF+INKVLERADSMGK SYLRIRIRRL+VRFGRRLKKLKKSAM SI  +KI VYKQ+I QIRNCKSLFGRK+
Subjt:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ

Query:  TNFANFPVLLSS
        TNFAN P LLSS
Subjt:  TNFANFPVLLSS
XP_038883675.1 uncharacterized protein LOC120074584 [Benincasa hispida]5.8e-4790.18Show/hide
Query:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
        MS VL +R NGY KVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAM SISTLKIGVYKQVI+QIRNCKSLFG KQ
Subjt:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ

Query:  TNFANFPVLLSS
        T+F NFP+LLSS
Subjt:  TNFANFPVLLSS
TrEMBL top hitse value%identityAlignment
A0A0A0KJX3 Uncharacterized protein1.2e-5399.11Show/hide
Query:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
        MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLK+LKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
Subjt:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ

Query:  TNFANFPVLLSS
        TNFANFPVLLSS
Subjt:  TNFANFPVLLSS
A0A1S3B0N9 uncharacterized protein LOC1034846046.7e-4992.86Show/hide
Query:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
        MS VLTKR NGYCKVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG+RLKKLKKSAM SISTLK+GVYKQVITQIRN KSLFGRKQ
Subjt:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ

Query:  TNFANFPVLLSS
        T FANFPVLLSS
Subjt:  TNFANFPVLLSS
A0A5D3CMA4 Uncharacterized protein6.7e-4992.86Show/hide
Query:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
        MS VLTKR NGYCKVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG+RLKKLKKSAM SISTLK+GVYKQVITQIRN KSLFGRKQ
Subjt:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ

Query:  TNFANFPVLLSS
        T FANFPVLLSS
Subjt:  TNFANFPVLLSS
A0A6J1CLW2 uncharacterized protein LOC1110124781.3e-4181.25Show/hide
Query:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
        MS +L +R NGY KVDKEDPEEIIHRRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFGRRLKKLKKSA+ SIS  KIGVYKQVI Q+RNCKSLFGRK+
Subjt:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ

Query:  TNFANFPVLLSS
           AN    LSS
Subjt:  TNFANFPVLLSS
A0A6J1KP23 uncharacterized protein LOC1114974083.8e-4484.82Show/hide
Query:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ
        MS VL K SNGY KVDKEDPEEIIHRRAQF+INKVLERADSMGK SYLRIRIRRL+VRFGRRLKKLKKSAM SI  +KI VYKQ+I QIRNCKSLFGRK+
Subjt:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQ

Query:  TNFANFPVLLSS
        TNFAN P LLSS
Subjt:  TNFANFPVLLSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11655.1 unknown protein1.1e-1138.78Show/hide
Query:  LVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGK----PSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLF
        + L KR   Y K+DKEDPEE++ RRA+FLI K L+ AD + +     S++R+++  LKV+ G+RL KL++S + ++     G+ K     +R  K +F
Subjt:  LVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGK----PSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLF
AT4G04745.1 unknown protein4.2e-1144.87Show/hide
Query:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLR---------IRIRRLKVRFGRRLKKLKKS
        M+L++      Y K++KEDP+E+IHRRAQFLI KVLERADS  +    R         IR+  +++R G++L+KL+K+
Subjt:  MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLR---------IRIRRLKVRFGRRLKKLKKS
AT4G21902.1 unknown protein8.7e-0938.46Show/hide
Query:  LVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERAD------SMGKPSYLRI---RIRRLKVRFGRRLKKLKKSAM
        + + K  N Y K++KED  EIIHRRAQFLI+K+L+RAD         + + +++   R+  ++++ G++L+KL+KS +
Subjt:  LVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERAD------SMGKPSYLRI---RIRRLKVRFGRRLKKLKKSAM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTGGTTCTTACTAAGAGGTCGAATGGTTACTGTAAGGTTGATAAAGAAGATCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAAAGTGTTGGA
AAGAGCAGATTCCATGGGGAAACCTTCGTATCTGAGAATTAGAATTCGAAGGCTGAAGGTTAGATTTGGGAGGAGATTGAAGAAGCTGAAGAAGAGTGCAATGGGAAGTA
TTTCAACTCTCAAGATTGGTGTTTACAAGCAAGTTATTACACAGATCAGAAATTGCAAGTCGTTGTTTGGCCGGAAACAAACTAACTTTGCCAATTTTCCTGTTTTGTTA
TCATCTTGA
mRNA sequenceShow/hide mRNA sequence
CTGAGCTTAGTTTAGAAGAGAGAAATGAGTTTGGTTCTTACTAAGAGGTCGAATGGTTACTGTAAGGTTGATAAAGAAGATCCAGAAGAGATAATTCATCGAAGAGCACA
GTTTCTAATCAACAAAGTGTTGGAAAGAGCAGATTCCATGGGGAAACCTTCGTATCTGAGAATTAGAATTCGAAGGCTGAAGGTTAGATTTGGGAGGAGATTGAAGAAGC
TGAAGAAGAGTGCAATGGGAAGTATTTCAACTCTCAAGATTGGTGTTTACAAGCAAGTTATTACACAGATCAGAAATTGCAAGTCGTTGTTTGGCCGGAAACAAACTAAC
TTTGCCAATTTTCCTGTTTTGTTATCATCTTGA
Protein sequenceShow/hide protein sequence
MSLVLTKRSNGYCKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMGSISTLKIGVYKQVITQIRNCKSLFGRKQTNFANFPVLL
SS