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CSPI06G33660 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G33660
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPatatin
Genome locationChr6:27896038..27896522
RNA-Seq ExpressionCSPI06G33660
SyntenyCSPI06G33660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647663.1 hypothetical protein Csa_003863 [Cucumis sativus]7.6e-5394.78Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFT LELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS

Query:  NRFNGIPG--FGYRI
        NRFNGIP    GY+I
Subjt:  NRFNGIPG--FGYRI
XP_008441098.1 PREDICTED: uncharacterized protein LOC103485325 [Cucumis melo]3.2e-5995.83Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHG SHTI GNALRRSDS+GSFWLLSLTWKWKKRK NNG+LPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
XP_011658506.1 uncharacterized protein LOC105436036 [Cucumis sativus]5.8e-6199.17Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFT LELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
XP_022977336.1 uncharacterized protein LOC111477686 [Cucurbita maxima]1.3e-4984.17Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
        MYKGMSRSRSFSEKM G +APLAIGTRGTVGSLVMKEIEYFT  E+ERHG S  ISG+A RRSD +GSFWL+SLTWKWKKRKGNNG+LPNI SAVE SKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGF YRILK DFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
XP_038882225.1 uncharacterized protein LOC120073447 [Benincasa hispida]7.3e-5693.33Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
        MYKGMSRSRSFSEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERHG SHTISG+ALRRSDS+GSFWLLSLTWKWKKRK NNG+LPNI SAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
TrEMBL top hitse value%identityAlignment
A0A0A0KL84 Uncharacterized protein2.8e-6199.17Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFT LELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
A0A1S3B3D8 uncharacterized protein LOC1034853251.5e-5995.83Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHG SHTI GNALRRSDS+GSFWLLSLTWKWKKRK NNG+LPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
A0A5D3CRM5 Uncharacterized protein1.5e-5995.83Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHG SHTI GNALRRSDS+GSFWLLSLTWKWKKRK NNG+LPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
A0A6J1IJL8 uncharacterized protein LOC1114776866.5e-5084.17Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
        MYKGMSRSRSFSEKM G +APLAIGTRGTVGSLVMKEIEYFT  E+ERHG S  ISG+A RRSD +GSFWL+SLTWKWKKRKGNNG+LPNI SAVE SKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGF YRILK DFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
A0A6J1KQQ8 uncharacterized protein LOC1114974073.9e-4781.3Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS
        MY+G+SRS SFSE+M GAVAPLAIGTRGT+GSLVMKEIEYFT LELERHG S  +SG+A RRSDSR SFWLLSL+WKWKKR+ NNG+LPNI SAVE SKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDD---FPI
        NRFNGIPGFGYRILKDD   FPI
Subjt:  NRFNGIPGFGYRILKDD---FPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein8.7e-1544.95Show/hide
Query:  APLAIGTRGTVGSLVMKEIEYFTNLEL------ERHGISHTISGNALR--RSDSRGSFWLLSLTWKWKKRK---GNNGVLPNISSAVEFSKSNRFNGIPG
        AP+AIGTRGT+GSLV KEI+YF N          R G S        +  RS SR   W     W+ KKR+   G     P++ SAVE S  NR   +PG
Subjt:  APLAIGTRGTVGSLVMKEIEYFTNLEL------ERHGISHTISGNALR--RSDSRGSFWLLSLTWKWKKRK---GNNGVLPNISSAVEFSKSNRFNGIPG

Query:  FGYRILKDD
        F YRILK D
Subjt:  FGYRILKDD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAAAGGAATGAGCAGAAGCAGAAGCTTCAGTGAGAAAATGGGTGGTGCTGTTGCTCCACTTGCAATTGGCACACGAGGTACTGTGGGGTCGCTGGTGATGAAGGA
GATTGAGTACTTTACCAACCTTGAGCTCGAACGCCATGGAATTTCTCACACTATCAGTGGAAATGCTTTGAGAAGAAGTGATTCTAGAGGAAGCTTTTGGCTTTTGTCAT
TGACTTGGAAGTGGAAGAAGAGAAAAGGCAACAATGGCGTTCTCCCTAACATTTCCTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTTGGT
TACAGGATTCTCAAAGATGACTTTCCCATTTGA
mRNA sequenceShow/hide mRNA sequence
AAAGTTAAAAATTTCATCAGACAAAGGAGGTGGCATAAACTCAAAGCAACCCACAAAAGTCCTCGAGGAAAGGGCCATTTTTTTTCACTTCAATTTGGAGTAAAATGTAT
AAAGGAATGAGCAGAAGCAGAAGCTTCAGTGAGAAAATGGGTGGTGCTGTTGCTCCACTTGCAATTGGCACACGAGGTACTGTGGGGTCGCTGGTGATGAAGGAGATTGA
GTACTTTACCAACCTTGAGCTCGAACGCCATGGAATTTCTCACACTATCAGTGGAAATGCTTTGAGAAGAAGTGATTCTAGAGGAAGCTTTTGGCTTTTGTCATTGACTT
GGAAGTGGAAGAAGAGAAAAGGCAACAATGGCGTTCTCCCTAACATTTCCTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTTGGTTACAGG
ATTCTCAAAGATGACTTTCCCATTTGATTTTTGATTTCTTGCTTC
Protein sequenceShow/hide protein sequence
MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGISHTISGNALRRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKSNRFNGIPGFG
YRILKDDFPI