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CSPI06G34060 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G34060
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionB-box type zinc finger family protein
Genome locationChr6:28084852..28085761
RNA-Seq ExpressionCSPI06G34060
SyntenyCSPI06G34060
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647679.1 hypothetical protein Csa_003671 [Cucumis sativus]1.2e-4897.89Show/hide
Query:  VHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCDDDDDDDEIENQVVPWLSLSPS
        VHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGC  DDDDDEIENQVVPWLSLSPS
Subjt:  VHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCDDDDDDDEIENQVVPWLSLSPS

TYK13089.1 putative zinc finger protein [Cucumis melo var. makuwa]7.6e-6492.19Show/hide
Query:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP
        MKKLCELCGCVATVMCE+DAAMLCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHK R NNGRRCEKACGSS+GG  TAP
Subjt:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP

Query:  SGC---DDDDDDDEIENQVVPWLSLSPS
        SGC   DDDDDDDEIENQVVPWLSLSPS
Subjt:  SGC---DDDDDDDEIENQVVPWLSLSPS

XP_008441086.2 PREDICTED: putative zinc finger protein At1g68190 [Cucumis melo]4.9e-6390.7Show/hide
Query:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP
        MKKLCELCGCVATVMCE+DAAMLCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHK R NNGRRCEKACGSS+GG  TAP
Subjt:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP

Query:  SGC----DDDDDDDEIENQVVPWLSLSPS
         GC    DDDDDDDEIENQVVPWLSLSPS
Subjt:  SGC----DDDDDDDEIENQVVPWLSLSPS

XP_011658518.1 zinc finger protein CONSTANS-LIKE 2 [Cucumis sativus]2.2e-5598.08Show/hide
Query:  MLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCDDDDDDDEIENQVVPWLS
        MLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGC  DDDDDEIENQVVPWLS
Subjt:  MLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCDDDDDDDEIENQVVPWLS

Query:  LSPS
        LSPS
Subjt:  LSPS

XP_022950367.1 putative zinc finger protein At1g68190 [Cucurbita moschata]1.6e-4573.02Show/hide
Query:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNN---GRRCEKACGSSDGGGT
        MKKLCELC CVATV+CESD A LCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSGP LVATVAFC NCV KNRRN     RR  +  G  +G G+
Subjt:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNN---GRRCEKACGSSDGGGT

Query:  TAPSGCDDDDDDDEIENQVVPWLSLS
        +        D DDE ENQVVPWLSLS
Subjt:  TAPSGCDDDDDDDEIENQVVPWLSLS

TrEMBL top hitse value%identityAlignment
A0A0A0KHH6 B box-type domain-containing protein1.9e-6898.4Show/hide
Query:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP
        MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP
Subjt:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP

Query:  SGCDDDDDDDEIENQVVPWLSLSPS
        SGC  DDDDDEIENQVVPWLSLSPS
Subjt:  SGCDDDDDDDEIENQVVPWLSLSPS

A0A1S3B3D3 putative zinc finger protein At1g681902.4e-6390.7Show/hide
Query:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP
        MKKLCELCGCVATVMCE+DAAMLCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHK R NNGRRCEKACGSS+GG  TAP
Subjt:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP

Query:  SGC----DDDDDDDEIENQVVPWLSLSPS
         GC    DDDDDDDEIENQVVPWLSLSPS
Subjt:  SGC----DDDDDDDEIENQVVPWLSLSPS

A0A5A7UBH5 Putative zinc finger protein2.4e-6390.7Show/hide
Query:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP
        MKKLCELCGCVATVMCE+DAAMLCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHK R NNGRRCEKACGSS+GG  TAP
Subjt:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP

Query:  SGC----DDDDDDDEIENQVVPWLSLSPS
         GC    DDDDDDDEIENQVVPWLSLSPS
Subjt:  SGC----DDDDDDDEIENQVVPWLSLSPS

A0A5D3CS61 Putative zinc finger protein3.7e-6492.19Show/hide
Query:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP
        MKKLCELCGCVATVMCE+DAAMLCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHK R NNGRRCEKACGSS+GG  TAP
Subjt:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAP

Query:  SGC---DDDDDDDEIENQVVPWLSLSPS
        SGC   DDDDDDDEIENQVVPWLSLSPS
Subjt:  SGC---DDDDDDDEIENQVVPWLSLSPS

A0A6J1GEL4 putative zinc finger protein At1g681907.7e-4673.02Show/hide
Query:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNN---GRRCEKACGSSDGGGT
        MKKLCELC CVATV+CESD A LCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSGP LVATVAFC NCV KNRRN     RR  +  G  +G G+
Subjt:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNN---GRRCEKACGSSDGGGT

Query:  TAPSGCDDDDDDDEIENQVVPWLSLS
        +        D DDE ENQVVPWLSLS
Subjt:  TAPSGCDDDDDDDEIENQVVPWLSLS

SwissProt top hitse value%identityAlignment
Q1G3I2 B-box domain protein 304.3e-0956Show/hide
Query:  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT
        CELCG  ATV CE+DAA LC  CD  VH ANF+  +HLR ++C  C+  T
Subjt:  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT

Q96502 Zinc finger protein CONSTANS-LIKE 21.4e-0729.6Show/hide
Query:  KLCELCGCVA-TVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNR--RNNGRRCEKACGSSDGGGTTA
        + C+ C   A TV CE+D+A LC  CD++VH AN +  +H RV +C  C++         +  +    C   +H         +R      S++   + A
Subjt:  KLCELCGCVA-TVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNR--RNNGRRCEKACGSSDGGGTTA

Query:  PSGCDDDDDDDEIENQVVPWLSLSP
        PS  D D+D+D  + +V  WL  +P
Subjt:  PSGCDDDDDDDEIENQVVPWLSLSP

Q9C9F4 Putative zinc finger protein At1g681901.0e-0732.8Show/hide
Query:  MKKLCELCGCV-ATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVA----TVAFCHNCVHK-------NRRNNGRRCEKA
        M+++CE C    A V C +D A LC  CD+KVH AN + G+HLR +LC  C+       + P +V      +  CH C  K         R    RC   
Subjt:  MKKLCELCGCV-ATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVA----TVAFCHNCVHK-------NRRNNGRRCEKA

Query:  CGSSDGGGTTAPSGCDDDDDDDEIE
        C  +            DDDDD  +E
Subjt:  CGSSDGGGTTAPSGCDDDDDDDEIE

Q9LJB7 B-box zinc finger protein 321.9e-0942.86Show/hide
Query:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNL
        M   CELCG  A + C +D+A LC  CD+K H +NF+  +H R ++C +C++ T    SGP L
Subjt:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNL

Q9LRM4 B-box domain protein 317.3e-0954Show/hide
Query:  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT
        CELC   A+V CE+D+A LC  CD  VHGANF+  +H+R +LC  CQ  T
Subjt:  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT

Arabidopsis top hitse value%identityAlignment
AT3G21150.1 B-box 321.4e-1042.86Show/hide
Query:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNL
        M   CELCG  A + C +D+A LC  CD+K H +NF+  +H R ++C +C++ T    SGP L
Subjt:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNL

AT3G21890.1 B-box type zinc finger family protein5.2e-1054Show/hide
Query:  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT
        CELC   A+V CE+D+A LC  CD  VHGANF+  +H+R +LC  CQ  T
Subjt:  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT

AT4G15248.1 B-box type zinc finger family protein3.0e-1056Show/hide
Query:  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT
        CELCG  ATV CE+DAA LC  CD  VH ANF+  +HLR ++C  C+  T
Subjt:  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT

AT4G27310.1 B-box type zinc finger family protein1.2e-2240.38Show/hide
Query:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGR--------RCEKACGSS
        M K C+LC  VA + CESD A LCW CD KVHGANF+V KH R LLC  CQ+ TPW  +G  L  T + C +CV       GR        R ++   S 
Subjt:  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGR--------RCEKACGSS

Query:  D----------GGGTTAPSGCDD-------------------DDDDDEIENQVVPW
        +          G G  A S  DD                   D DD+E ENQVVPW
Subjt:  D----------GGGTTAPSGCDD-------------------DDDDDEIENQVVPW

AT5G54470.1 B-box type zinc finger family protein9.4e-2847.62Show/hide
Query:  KKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNG---------RRCEKACGSS
        KK CELC  VA + CESD A LCW CD KVHGANF+V KH+R LLC  CQ+ TPW  SG NL  TV+ C +C+ + + NN           + E+  G +
Subjt:  KKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNG---------RRCEKACGSS

Query:  DGGGTTAPSGCDDDDDDDEIENQVVP
        D G  +     D+D++++E+ENQVVP
Subjt:  DGGGTTAPSGCDDDDDDDEIENQVVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGTTGTGCGAGCTGTGTGGGTGTGTGGCTACGGTGATGTGCGAATCAGACGCAGCCATGTTATGTTGGGGTTGCGATTCGAAGGTGCATGGGGCTAACTTTAT
AGTGGGGAAGCATTTGAGGGTTTTGCTGTGTCATGATTGTCAAGCCCCTACCCCTTGGAATGGTTCTGGCCCTAACCTTGTGGCTACGGTTGCCTTTTGCCACAATTGTG
TTCACAAAAATAGGCGGAATAATGGGAGACGGTGTGAGAAAGCTTGTGGGAGCTCTGATGGCGGCGGAACTACTGCACCTAGTGGTTGCGATGACGATGACGATGACGAT
GAGATTGAAAATCAAGTGGTGCCTTGGTTATCTTTGTCCCCCAGCTAA
mRNA sequenceShow/hide mRNA sequence
CAAAAACGAAAACAGAAAAACCATCAAAATCTATGGAAAAAAAGAAGTAGAAAGGTTCGCCCACAGAATGGTATTCATTGATTTTGGCCACAAATGATTATCTCAAACAC
CCACTTGCCCCATCTCCCCCTTTCCATGATATTTCTTCGTCCAAATACAGAGTTAAAAAAAAGAAAAGACAACCCAACTTGATGTCCTTACAGTTATCCCATCTGCACAA
TATTCTCTTCGTTAATGGCATCTTGTGTTATATAAATAAGTGAGTGATAAGAGGAAACAAAAACTATATTAAAAAAAAAAAAAAAAGAAGAATGAAGAAGTTGTGCGAGC
TGTGTGGGTGTGTGGCTACGGTGATGTGCGAATCAGACGCAGCCATGTTATGTTGGGGTTGCGATTCGAAGGTGCATGGGGCTAACTTTATAGTGGGGAAGCATTTGAGG
GTTTTGCTGTGTCATGATTGTCAAGCCCCTACCCCTTGGAATGGTTCTGGCCCTAACCTTGTGGCTACGGTTGCCTTTTGCCACAATTGTGTTCACAAAAATAGGCGGAA
TAATGGGAGACGGTGTGAGAAAGCTTGTGGGAGCTCTGATGGCGGCGGAACTACTGCACCTAGTGGTTGCGATGACGATGACGATGACGATGAGATTGAAAATCAAGTGG
TGCCTTGGTTATCTTTGTCCCCCAGCTAATTGAAAATTTTCTTCCCCTCTATGATTAATCCGTGCCCCATGCAATTTAATAATTATAGTTTGGAATCACTTTTTGGTTCT
CTATAATAATGTACAATGTAAATTTATCCTTTAAATTATGGGTAGGTACTCTAGGAATTTCATTTTTTTATAAGTATACCATTCAACAAATGTAATGGGGAAATTTTGAA
CTTTACACCTCAATTATATCTGTTCTCGCC
Protein sequenceShow/hide protein sequence
MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCDDDDDDD
EIENQVVPWLSLSPS