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CSPI06G34160 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G34160
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCHCH domain-containing protein
Genome locationChr6:28139172..28140036
RNA-Seq ExpressionCSPI06G34160
SyntenyCSPI06G34160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134733.1 uncharacterized protein LOC101211873 [Cucumis sativus]1.0e-7599.31Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
        MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS TKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_022949732.1 uncharacterized protein LOC111453037 [Cucurbita moschata]1.2e-5278.91Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---RTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK
        MISLKPS HHNG  +SF  NSS   Q   PI R  + NF    RTKTTFR  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLK
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---RTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_022977984.1 uncharacterized protein LOC111478111 [Cucurbita maxima]1.8e-5379.45Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQ--NPIPIIRITKPNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKV
        MISLKPS HHNG  +SF  NSS   Q  NPI  +R   P   RTKTTFR  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLKV
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQ--NPIPIIRITKPNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKV

Query:  IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_023544671.1 uncharacterized protein LOC111804184 [Cucurbita pepo subsp. pepo]6.9e-5378.23Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---RTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK
        MISLKPS HHNG  +SF +NSS   Q   PI R  + NF    RTKTTF+  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLK
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---RTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_038881387.1 uncharacterized protein LOC120072922 [Benincasa hispida]1.1e-5581.88Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---RTK-TTFRTHAQPSG-SGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNL
        MISL PSTHHNG  +SF YNSS  QQN IP I   KPNF+    TK TTFRT A+ +G SG G Q+RTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNL
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---RTK-TTFRTHAQPSG-SGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNL

Query:  LKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        L+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  LKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

TrEMBL top hitse value%identityAlignment
A0A0A0KHI4 Uncharacterized protein4.8e-7699.31Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
        MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS TKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1CKG5 uncharacterized protein LOC1110124326.0e-4265.81Show/hide
Query:  MISLKPSTHHNGFDTSFP-YNSSKFQQNPIP----------IIRITKPNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLT
        MISL P  + NG  +SFP Y+S+     PIP           I + K NF      FR        G   Q+RTFLT+EEAGLVEVSGLSTHERFLCRLT
Subjt:  MISLKPSTHHNGFDTSFP-YNSSKFQQNPIP----------IIRITKPNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLT

Query:  ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        ISSLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  ISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1GCY7 uncharacterized protein LOC1114530375.7e-5378.91Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---RTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK
        MISLKPS HHNG  +SF  NSS   Q   PI R  + NF    RTKTTFR  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLK
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFS---RTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLK

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1ISV2 uncharacterized protein LOC1114781118.9e-5479.45Show/hide
Query:  MISLKPSTHHNGFDTSFPYNSSKFQQ--NPIPIIRITKPNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKV
        MISLKPS HHNG  +SF  NSS   Q  NPI  +R   P   RTKTTFR  A+ + SG G Q+RTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLLKV
Subjt:  MISLKPSTHHNGFDTSFPYNSSKFQQ--NPIPIIRITKPNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKV

Query:  IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  IAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6P4A1U2 uncharacterized protein LOC1074220013.4e-3759.73Show/hide
Query:  MISLKP-STHHNGFDTSFPYNSSKFQQNPIPIIRITK----PNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNL
        M+SLKP  THH     S P+N     +     IR TK     + S +        +     K  Q+RTFLT+EEAGLVE+SGL THERFLCRLTISSLNL
Subjt:  MISLKP-STHHNGFDTSFPYNSSKFQQNPIPIIRITK----PNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNL

Query:  LKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        L+VIAE+E CSIEELNAGR+CDWF+KDKLKREQN+DSAVLQWDDS+  F
Subjt:  LKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21445.1 unknown protein3.5e-3465.66Show/hide
Query:  KTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD
        + +  T  + S     P++R+FL++ EAGLVE+SGL  HE+FLCRLTISSLNLL+VI+E+E CSIEELNAG++CDWFLKDKLKRE N++SAVLQWDD D
Subjt:  KTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCACTCAAACCCTCCACTCACCACAACGGATTTGATACTTCATTCCCTTACAATTCTTCAAAATTTCAACAAAACCCCATTCCAATCATTAGAATAACTAAGCC
CAATTTCTCACGTACCAAAACAACCTTCAGAACCCACGCCCAGCCGTCCGGATCAGGCAAAGGCCCTCAAAAACGGACTTTCCTGACCATCGAAGAAGCCGGCCTCGTAG
AAGTATCCGGCCTCAGCACCCACGAAAGATTTCTCTGCCGTTTAACCATATCTTCTCTGAATTTACTGAAAGTGATAGCGGAGGAAGAGAAATGCTCGATTGAAGAGTTG
AATGCGGGAAGATTATGCGATTGGTTTCTCAAGGATAAGTTGAAAAGAGAGCAGAATTTGGATTCTGCTGTTCTTCAATGGGATGATTCTGATCCTCTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
AGGGAACAAGGAAAAAAAAATATACAAATGCACATTCTCATTTATCCCTTTACTCCATCCCCCACCACATAAAAGCAGTAGCCGATAACCCCCTGCATCATCTTCCTCCT
TCCACACCATTCTTTCACTTCAACAATCAACAAGAAATGATCTCACTCAAACCCTCCACTCACCACAACGGATTTGATACTTCATTCCCTTACAATTCTTCAAAATTTCA
ACAAAACCCCATTCCAATCATTAGAATAACTAAGCCCAATTTCTCACGTACCAAAACAACCTTCAGAACCCACGCCCAGCCGTCCGGATCAGGCAAAGGCCCTCAAAAAC
GGACTTTCCTGACCATCGAAGAAGCCGGCCTCGTAGAAGTATCCGGCCTCAGCACCCACGAAAGATTTCTCTGCCGTTTAACCATATCTTCTCTGAATTTACTGAAAGTG
ATAGCGGAGGAAGAGAAATGCTCGATTGAAGAGTTGAATGCGGGAAGATTATGCGATTGGTTTCTCAAGGATAAGTTGAAAAGAGAGCAGAATTTGGATTCTGCTGTTCT
TCAATGGGATGATTCTGATCCTCTTTTCTGATCTTTTTTCTTCGACCAATTACACTCCCTCCTATTCATGTTCCCTCCACATTCTGTTAAACACACAATTAATTTCGCAT
TATATTTGGGGATTTAATTAACTTTTTTCTTCTTCTTTTAATTTAGGATCAATCATAAAGTTCAAATGGTCTAATAATGCATGTCTCAACTAGTTTACTTCACC
Protein sequenceShow/hide protein sequence
MISLKPSTHHNGFDTSFPYNSSKFQQNPIPIIRITKPNFSRTKTTFRTHAQPSGSGKGPQKRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLKVIAEEEKCSIEEL
NAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF