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CSPI06G34380 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G34380
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:28260930..28261835
RNA-Seq ExpressionCSPI06G34380
SyntenyCSPI06G34380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052708.1 hypothetical protein E6C27_scaffold120G003210 [Cucumis melo var. makuwa]3.2e-3663.77Show/hide
Query:  EDYKGFTDTETNNNSCNLRFVQKCQNQNNKRRFAFLYTEGGRNERGQSVIFWPSNEAAQFMLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERE
        EDYKGFTD ETN NSCNL+FVQ+CQNQNNKRRF FLYT GGRNE+GQSVIFWPSNEAAQFMLSLYD+    +G+                          
Subjt:  EDYKGFTDTETNNNSCNLRFVQKCQNQNNKRRFAFLYTEGGRNERGQSVIFWPSNEAAQFMLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERE

Query:  RKRGRANSSCSGQRAYRDISISNIVAAKVTKEGDYVQR
                S  GQRAYRDISISNIVAAKVTKEGDYVQR
Subjt:  RKRGRANSSCSGQRAYRDISISNIVAAKVTKEGDYVQR
KGN49203.1 hypothetical protein Csa_002915 [Cucumis sativus]7.3e-4999.03Show/hide
Query:  MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSSCSGQRAYRDISISNIVAAKVTKEGDYVQRYVFGLRLFHGHKSIYVPLNSLT
        MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANS+CSGQRAYRDISISNIVAAKVTKEGDYVQRYVFGLRLFHGHKSIYVPLNSLT
Subjt:  MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSSCSGQRAYRDISISNIVAAKVTKEGDYVQRYVFGLRLFHGHKSIYVPLNSLT

Query:  ISM
        ISM
Subjt:  ISM
KGN49204.1 hypothetical protein Csa_003775 [Cucumis sativus]3.3e-0997.3Show/hide
Query:  VAARIILKPELLLASLLDGFLHRSSHPPEQFLELLST
        VAARIILKPELLLAS+LDGFLHRSSHPPEQFLELLST
Subjt:  VAARIILKPELLLASLLDGFLHRSSHPPEQFLELLST
TrEMBL top hitse value%identityAlignment
A0A0A0KI11 Uncharacterized protein3.5e-4999.03Show/hide
Query:  MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSSCSGQRAYRDISISNIVAAKVTKEGDYVQRYVFGLRLFHGHKSIYVPLNSLT
        MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANS+CSGQRAYRDISISNIVAAKVTKEGDYVQRYVFGLRLFHGHKSIYVPLNSLT
Subjt:  MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSSCSGQRAYRDISISNIVAAKVTKEGDYVQRYVFGLRLFHGHKSIYVPLNSLT

Query:  ISM
        ISM
Subjt:  ISM
A0A0A0KK41 Uncharacterized protein1.6e-0997.3Show/hide
Query:  VAARIILKPELLLASLLDGFLHRSSHPPEQFLELLST
        VAARIILKPELLLAS+LDGFLHRSSHPPEQFLELLST
Subjt:  VAARIILKPELLLASLLDGFLHRSSHPPEQFLELLST
A0A5D3CRT7 Uncharacterized protein1.5e-3663.77Show/hide
Query:  EDYKGFTDTETNNNSCNLRFVQKCQNQNNKRRFAFLYTEGGRNERGQSVIFWPSNEAAQFMLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERE
        EDYKGFTD ETN NSCNL+FVQ+CQNQNNKRRF FLYT GGRNE+GQSVIFWPSNEAAQFMLSLYD+    +G+                          
Subjt:  EDYKGFTDTETNNNSCNLRFVQKCQNQNNKRRFAFLYTEGGRNERGQSVIFWPSNEAAQFMLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERE

Query:  RKRGRANSSCSGQRAYRDISISNIVAAKVTKEGDYVQR
                S  GQRAYRDISISNIVAAKVTKEGDYVQR
Subjt:  RKRGRANSSCSGQRAYRDISISNIVAAKVTKEGDYVQR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGGCAAAGTGTCAATCTGCCTATCAAGAAAATTCACTCAGATTTCACCAAAAGTACAAAAACCCACATGGCAGACGTAGCTGCAAGGATCATACTGAAACCTGA
ACTGCTGCTTGCTTCCCTTCTTGATGGCTTTCTTCATCGCAGCTCTCATCCTCCAGAACAGTTTCTTGAATTGCTTTCTACTGAAGATTATAAAGGATTCACAGACACAG
AGACAAACAATAACAGTTGCAATCTGAGGTTTGTGCAGAAGTGTCAGAACCAAAACAACAAAAGACGATTCGCCTTTTTGTATACAGAAGGAGGGCGAAATGAGAGAGGG
CAAAGCGTAATCTTTTGGCCTTCCAATGAAGCTGCGCAGTTTATGTTGAGCCTCTACGATGATCGGCCTTTTCTCCTTGGAGTCATGTTGGAATGCTCAAATTCCATCAA
CTACAGCGATAAAGACAGAGAAGGAGTAGGAGAAGGAAAAGGAGAGAGAGAGAGAAAGAGAGGGAGAGCTAATAGCAGTTGCAGTGGGCAGAGAGCCTACAGAGACATAT
CAATATCGAATATTGTTGCGGCAAAAGTAACGAAGGAAGGTGACTATGTTCAACGGTATGTCTTCGGTCTTCGCCTCTTTCACGGGCATAAAAGTATTTATGTTCCACTA
AACTCCTTAACCATCTCTATG
mRNA sequenceShow/hide mRNA sequence
ATGAACAGGCAAAGTGTCAATCTGCCTATCAAGAAAATTCACTCAGATTTCACCAAAAGTACAAAAACCCACATGGCAGACGTAGCTGCAAGGATCATACTGAAACCTGA
ACTGCTGCTTGCTTCCCTTCTTGATGGCTTTCTTCATCGCAGCTCTCATCCTCCAGAACAGTTTCTTGAATTGCTTTCTACTGAAGATTATAAAGGATTCACAGACACAG
AGACAAACAATAACAGTTGCAATCTGAGGTTTGTGCAGAAGTGTCAGAACCAAAACAACAAAAGACGATTCGCCTTTTTGTATACAGAAGGAGGGCGAAATGAGAGAGGG
CAAAGCGTAATCTTTTGGCCTTCCAATGAAGCTGCGCAGTTTATGTTGAGCCTCTACGATGATCGGCCTTTTCTCCTTGGAGTCATGTTGGAATGCTCAAATTCCATCAA
CTACAGCGATAAAGACAGAGAAGGAGTAGGAGAAGGAAAAGGAGAGAGAGAGAGAAAGAGAGGGAGAGCTAATAGCAGTTGCAGTGGGCAGAGAGCCTACAGAGACATAT
CAATATCGAATATTGTTGCGGCAAAAGTAACGAAGGAAGGTGACTATGTTCAACGGTATGTCTTCGGTCTTCGCCTCTTTCACGGGCATAAAAGTATTTATGTTCCACTA
AACTCCTTAACCATCTCTATG
Protein sequenceShow/hide protein sequence
MNRQSVNLPIKKIHSDFTKSTKTHMADVAARIILKPELLLASLLDGFLHRSSHPPEQFLELLSTEDYKGFTDTETNNNSCNLRFVQKCQNQNNKRRFAFLYTEGGRNERG
QSVIFWPSNEAAQFMLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSSCSGQRAYRDISISNIVAAKVTKEGDYVQRYVFGLRLFHGHKSIYVPL
NSLTISM