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CSPI06G34390 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G34390
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLate endosome and vacuole interface protein
Genome locationChr6:28261516..28261794
RNA-Seq ExpressionCSPI06G34390
SyntenyCSPI06G34390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3451534.1 hypothetical protein FNV43_RR07629 [Rhamnella rubrinervis]3.4e-2158.95Show/hide
Query:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKF-EAVASET-HAKFQASSNLNHSAMWVFVLLVKSE
        MG +  + W+NTYSRK  + LFWR+RAA+KKA+K G KQQ RFQYDPCSYALNFDDG CK  EA  + + HAK Q  S+  +S  WV+VL VK++
Subjt:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKF-EAVASET-HAKFQASSNLNHSAMWVFVLLVKSE

KAG6594620.1 hypothetical protein SDJN03_11173, partial [Cucurbita argyrosperma subsp. sororia]7.7e-2983.54Show/hide
Query:  RKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETHAKFQASSNLNHSAMWVFVLLVKSE
        RKQF+KLFWRMRAAMKKAIK G K++F FQYDPCSYALNFDDG CKFEAVA E  AK Q SSNLNHS MWVFVLLVKSE
Subjt:  RKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETHAKFQASSNLNHSAMWVFVLLVKSE

KAG7958932.1 hypothetical protein I3843_10G045200 [Carya illinoinensis]6.1e-1852.13Show/hide
Query:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASE-THAKFQASSNLNHSAMWVFVLLVKSE
        MG  G +EW + YS+KQF+ LFWRMRA++KKA+K   KQQ +FQYDP SYALNFDDG       A+E  HAKFQ   ++  ++ WV+++ V+ E
Subjt:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASE-THAKFQASSNLNHSAMWVFVLLVKSE

OAY26128.1 hypothetical protein MANES_16G023500v8 [Manihot esculenta]2.7e-1853.26Show/hide
Query:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETHAKFQASSNLNHSAMWVFVLLVKS
        MG +G  EWMN++S+KQ K LFWR++AA+KKA+K G KQQ  FQYDP SYALNFDDG C F     E   +     N     +WV+VL V+S
Subjt:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETHAKFQASSNLNHSAMWVFVLLVKS

TXG47332.1 hypothetical protein EZV62_026626 [Acer yangbiense]9.4e-1953.47Show/hide
Query:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDD-----GLCK--FEAVASETHAKFQ-ASSNLNHSAMWVFVLLVKS
        MGFV   EW+N+Y ++Q K LFWR+RAA+KKA+K GSK QF+FQYDP SYALNFDD     G CK   ++ +     KFQ  +S  N+  MWV+V+LV+ 
Subjt:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDD-----GLCK--FEAVASETHAKFQ-ASSNLNHSAMWVFVLLVKS

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A061GFJ8 Glucose-fructose oxidoreductase domain-containing protein 2, putative6.6e-1853.76Show/hide
Query:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETH-AKFQASSNLNHSAMWVFVLLVKS
        M F+G +EW+N+Y +KQ + LFWR++AA+KKA+K  SKQQF+F YDP SYALNFDDG C   A A+    A+F   S    + +WV+VL VKS
Subjt:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETH-AKFQASSNLNHSAMWVFVLLVKS

A0A2C9U5L8 Uncharacterized protein3.8e-1851.09Show/hide
Query:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETHAKFQASSNLNHSAMWVFVLLVKS
        MG +G +EWMN++S+KQ K LFWR++AA+KKA+K G KQQ  FQYDP SYALNFDDG C F   + E  +     S   +  +W++V+ V+S
Subjt:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETHAKFQASSNLNHSAMWVFVLLVKS

A0A2C9U8B6 Uncharacterized protein1.3e-1853.26Show/hide
Query:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETHAKFQASSNLNHSAMWVFVLLVKS
        MG +G  EWMN++S+KQ K LFWR++AA+KKA+K G KQQ  FQYDP SYALNFDDG C F     E   +     N     +WV+VL V+S
Subjt:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETHAKFQASSNLNHSAMWVFVLLVKS

A0A5C7GSN3 Uncharacterized protein4.5e-1953.47Show/hide
Query:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDD-----GLCK--FEAVASETHAKFQ-ASSNLNHSAMWVFVLLVKS
        MGFV   EW+N+Y ++Q K LFWR+RAA+KKA+K GSK QF+FQYDP SYALNFDD     G CK   ++ +     KFQ  +S  N+  MWV+V+LV+ 
Subjt:  MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDD-----GLCK--FEAVASETHAKFQ-ASSNLNHSAMWVFVLLVKS

Query:  E
        E
Subjt:  E

A0A7J8MLK3 Uncharacterized protein5.0e-1853.26Show/hide
Query:  FVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIK-KGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETH-AKFQASSNLNHSAMWVFVLLVKS
        F+G +EW+N+Y +KQ + LFWR +AAMKKA+K +G+K+QF+FQYDP SYALNFDDG C     A+    A+ Q  S   +  +WV+VL VKS
Subjt:  FVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIK-KGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETH-AKFQASSNLNHSAMWVFVLLVKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11112.1 unknown protein8.8e-0744.59Show/hide
Query:  KKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETHAKFQASSNLN-HSAMWVFVLLVK
        KK+F RM+AA+KK  K   K+Q  FQYDP SYALNFDDG+        E   +F    N   H    ++V+ VK
Subjt:  KKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETHAKFQASSNLN-HSAMWVFVLLVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTGTGGGAGGCATAGAATGGATGAATACTTACAGTAGAAAGCAATTCAAGAAACTGTTCTGGAGGATGAGAGCTGCGATGAAGAAAGCCATCAAGAAGGGAAG
CAAGCAGCAGTTCAGGTTTCAGTATGATCCTTGCAGCTACGCTCTAAATTTTGACGATGGATTATGCAAATTTGAAGCTGTCGCAAGTGAAACACATGCTAAGTTTCAAG
CTAGTTCAAATTTGAATCACTCTGCCATGTGGGTTTTTGTACTTTTGGTGAAATCTGAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTGTGGGAGGCATAGAATGGATGAATACTTACAGTAGAAAGCAATTCAAGAAACTGTTCTGGAGGATGAGAGCTGCGATGAAGAAAGCCATCAAGAAGGGAAG
CAAGCAGCAGTTCAGGTTTCAGTATGATCCTTGCAGCTACGCTCTAAATTTTGACGATGGATTATGCAAATTTGAAGCTGTCGCAAGTGAAACACATGCTAAGTTTCAAG
CTAGTTCAAATTTGAATCACTCTGCCATGTGGGTTTTTGTACTTTTGGTGAAATCTGAG
Protein sequenceShow/hide protein sequence
MGFVGGIEWMNTYSRKQFKKLFWRMRAAMKKAIKKGSKQQFRFQYDPCSYALNFDDGLCKFEAVASETHAKFQASSNLNHSAMWVFVLLVKSE