; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G34540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G34540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA polymerase II transcription factor B subunit 2
Genome locationChr6:28343558..28353128
RNA-Seq ExpressionCSPI06G34540
SyntenyCSPI06G34540
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0005675 - transcription factor TFIIH holo complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0001671 - ATPase activator activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR004598 - Transcription factor TFIIH subunit p52/Tfb2
IPR040662 - Transcription factor Tfb2, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604444.1 General transcription and DNA repair factor IIH subunit TFB2, partial [Cucurbita argyrosperma subsp. sororia]1.4e-24896.45Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID  V+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

XP_004134713.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus]8.9e-25699.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDG VSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]2.1e-24996.67Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID  V+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]1.4e-24896.45Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID  V+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

XP_038882460.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Benincasa hispida]9.5e-25097.12Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLP MKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID  VSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLLIHGEVLAREPMP+NITVRLPSLE+L+AYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL+DEQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWED KN+RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

TrEMBL top hitse value%identityAlignment
A0A0A0KK55 RNA polymerase II transcription factor B subunit 24.3e-25699.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDG VSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

A0A5A7UBE2 RNA polymerase II transcription factor B subunit 24.8e-23993.67Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID  VSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------
        RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ                   
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------

Query:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF
              RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF
Subjt:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF

Query:  IPTKLATNLSMSLADSSSRKLGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV
        IPTKLATNLSMSLADSSSRK GFVVVETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV
Subjt:  IPTKLATNLSMSLADSSSRKLGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV

Query:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRL
        PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRL
Subjt:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRL

A0A6J1CK16 RNA polymerase II transcription factor B subunit 29.3e-24388.39Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+  V+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLI+GEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLSDEQRYAIKDLAD
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGE                                        AYDIDTL++EQRYAIKDLAD
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLSDEQRYAIKDLAD

Query:  LGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFL
        LGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVVVETNFRMYAYS+S+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFL
Subjt:  LGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFL

Query:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKAD+HTHMREHLRRQK
Subjt:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

A0A6J1EGA7 RNA polymerase II transcription factor B subunit 23.6e-24796.01Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLY NAFICEAILRSLPPLAKKFVLQMLYID  V+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLI GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

A0A6J1IIT5 RNA polymerase II transcription factor B subunit 21.0e-24996.67Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID  V+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

SwissProt top hitse value%identityAlignment
O70422 General transcription factor IIH subunit 41.0e-6834.23Show/hide
Query:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQA
        +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++  +   ++  WV  +     + +   L  LR++             LNP F+ 
Subjt:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQA

Query:  NLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW
        NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++T AQLW
Subjt:  NLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW

Query:  YIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKLGFVVVETN
        Y + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF+VVETN
Subjt:  YIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKLGFVVVETN

Query:  FRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF
        +R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T    Y++F
Subjt:  FRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF

Query:  PSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
         S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  PSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

P60027 General transcription factor IIH subunit 45.9e-6934Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++  +   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKLGF
        T AQLWY + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKLGF

Query:  VVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

Q680U9 General transcription and DNA repair factor IIH subunit TFB21.8e-20678Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID  V A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYSTSKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

Q6CLR2 General transcription and DNA repair factor IIH subunit TFB26.7e-6531.07Show/hide
Query:  DMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQK
        D +  LP     +LYE+   C AI R L P+AK F++ ML+ D  VS + +++WV PD   + + ++  +  L + IE  + K+    RLNP F+ + + 
Subjt:  DMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQK

Query:  LLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQ-KGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIRE
        +L  GE+       ++      S   L+ Y+ ++WE  L  ++ +     P      V+ + Q  GL+ + +    ++T  GFQFLL + NAQ+W ++ +
Subjt:  LLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQ-KGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIRE

Query:  YISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNL--------SMSLA-DSSSRKL------
        Y+  AE   +DP D+++F+  L     G+AY  D LS+ QR  ++D+ D GL+  Q     + F PT+LAT L        S S+A DS   K       
Subjt:  YISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNL--------SMSLA-DSSSRKL------

Query:  ---------------GFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPR--------------
                       G +++ETNF++Y+YS S L   IL LF  ++ +  N++ G +T+ES+ NA  NGITAEQI+ +L+ +AHPR              
Subjt:  ---------------GFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPR--------------

Query:  ----VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRR
            V E +  +P  V DQIRLW+ +L+R+     + Y +F S + ++   DYA++   LLW++ K     V  + ++ + +  RR
Subjt:  ----VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRR

Q92759 General transcription factor IIH subunit 45.9e-6934Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++  +   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKLGF
        T AQLWY + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKLGF

Query:  VVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK

Arabidopsis top hitse value%identityAlignment
AT4G17020.1 transcription factor-related1.3e-20778Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID  V A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYSTSKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

AT4G17020.2 transcription factor-related1.3e-20778Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID  V A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYSTSKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

AT4G17020.3 transcription factor-related1.3e-20778Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID  V A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV

Query:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYSTSKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCT
CAGGTCACTTCCGCCACTGGCTAAGAAGTTTGTTTTACAAATGTTATACATTGATGGTCAAGTTTCAGCCAAGTCCATGGAGGAGTGGGTGCTTCCAGATGGAGTCTCAA
AGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCAGATAGGAAAAGAGAAACAACCTACCGGCTAAATCCAACTTTCCAAGCAAACCTC
CAAAAGCTTTTAATACATGGTGAAGTTCTAGCCAGAGAACCTATGCCTTCTAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTGAGGCTTATGCTCTGGATCAGTG
GGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAGCCATCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATA
AAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTAATGCTGAGGAGCGAGGT
GTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATTGATACACTGTCAGATGAACAGAGGTATGCTATCAAGGA
CCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGAGAGTTGGTTCATACCTACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCCTCTTCGA
GGAAACTGGGATTTGTTGTTGTGGAGACAAATTTCAGGATGTATGCTTATTCTACTTCCAAACTACATTGTGAAATATTACGTCTTTTTTCAAGGATTGAGTATCAACTT
CCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACAGCAGAGCAGATAGTTACTTTTCTACAACAGAATGCACATCCTCG
TGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACAGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTTGATATTACTCCCGCACATTTTTACGACGAAT
TTCCTTCCAGGGAAGTTTTCGAGGCTGCTTGCGACTATGCACGGGAATGGAACGGGTTGCTATGGGAGGATTCAAAAAACTTGCGACTGGTAGTGAAGGCAGACATACAC
ACACATATGCGAGAACATCTTCGGCGTCAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
GCAACACGTCTTTAGTTTGAAGTTGCAGATCTGTCCAAGTCGCCGATGCCGTCCGATCACCTTTCAGCAGGTGTTGCCCGTTGCCGCGCGAGGTTCCAAATTTTATACTT
TAGGGTTTTCATTTTTACACAGGGGTAATTGGACAATTCATATATCCATTTGTCTCAAAGGAAAAAAAAAGTTTAAATTGAAAGCTCATCTAAAATGGCAATTTCCCGAC
CCAATAGCTTCTTTTATAATCAAGAAGAATTGGACATTCAACTACGTGTCGTTCTTCGTCTTCGGTCTTCCGAATGAGCAAGCAGTGTCAATCTACTAAGGTTAACTTTG
AGTTAGTTGATAACTGATTGATTTAAGAGGATCTCACCATTTGCTATAAGTCTCACTCTCGACCTGGAACCTGCAATTTTTTTAATTCGTGATTCTGTGCCTAAAGGACT
AGCAAAGCTAATCCAAAATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTC
ATCTGCGAAGCCATTCTCAGGTCACTTCCGCCACTGGCTAAGAAGTTTGTTTTACAAATGTTATACATTGATGGTCAAGTTTCAGCCAAGTCCATGGAGGAGTGGGTGCT
TCCAGATGGAGTCTCAAAGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCAGATAGGAAAAGAGAAACAACCTACCGGCTAAATCCAA
CTTTCCAAGCAAACCTCCAAAAGCTTTTAATACATGGTGAAGTTCTAGCCAGAGAACCTATGCCTTCTAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTGAGGCT
TATGCTCTGGATCAGTGGGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAGCCATCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCT
TTTAAGTCAGAGGGATAAAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTA
ATGCTGAGGAGCGAGGTGTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATTGATACACTGTCAGATGAACAG
AGGTATGCTATCAAGGACCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGAGAGTTGGTTCATACCTACTAAATTAGCCACAAATCTTTCAATGAGTTT
GGCAGATTCCTCTTCGAGGAAACTGGGATTTGTTGTTGTGGAGACAAATTTCAGGATGTATGCTTATTCTACTTCCAAACTACATTGTGAAATATTACGTCTTTTTTCAA
GGATTGAGTATCAACTTCCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACAGCAGAGCAGATAGTTACTTTTCTACAA
CAGAATGCACATCCTCGTGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACAGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTTGATATTACTCCCGC
ACATTTTTACGACGAATTTCCTTCCAGGGAAGTTTTCGAGGCTGCTTGCGACTATGCACGGGAATGGAACGGGTTGCTATGGGAGGATTCAAAAAACTTGCGACTGGTAG
TGAAGGCAGACATACACACACATATGCGAGAACATCTTCGGCGTCAAAAGTAGATTGCGAAGACATGATACAATACGGCTGCCAAGAAATACAATACGGCAGACATACAC
ACACATATGCGAGAACATCTTCCGTTTTTGTTGCTTCAGTGGCATGGCCTAAAAGATAAGTCTTTAATGACGGTGAAGAACGCAGTGAAAGTTTTTGGCGGGATTGGGAG
GAAAGAAAATTGTGCCCATGACAATGGTTTTGTTACTGTGTACATTTCGAAGTCAGTTCCCCTTGTTCGTAGATTATATGATACGCAAGTTTTGTTATGTTGATTTCCCT
TTGACAATCAACATTTTGGTATAGTTGGCATACAAATGTGCTACTAATCAAGAGATTTGTTATCAAAATTCTTTAATCTTATTGTATCACTGCTTGATAAAAAAAAAAAA
AGAAATTATGGGTACTACTTCGTTCTGGCACTTACGTCTGGGACTATAAAAAAACATGGCCATGTGCTTCAAAAAATAATGAAATGTGTAATGTCAAAGATCATGGAGGG
GAACTTTTAG
Protein sequenceShow/hide protein sequence
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGQVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANL
QKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERG
VDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQL
PNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIH
THMREHLRRQK