; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G34550 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G34550
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:28354239..28357778
RNA-Seq ExpressionCSPI06G34550
SyntenyCSPI06G34550
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13131.1 uncharacterized protein E5676_scaffold255G007410 [Cucumis melo var. makuwa]3.2e-2198.25Show/hide
Query:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALS
        MQMG+PGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALS
Subjt:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALS
XP_016899369.1 PREDICTED: uncharacterized protein LOC103484528 isoform X2 [Cucumis melo]8.0e-4998.1Show/hide
Query:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQTGLQNQHLLFRNPPHDLQSLNQLPKMKTCQ
        MQMG+PGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQT LQNQHLLFRNPPHDLQSLNQLPKMKTCQ
Subjt:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQTGLQNQHLLFRNPPHDLQSLNQLPKMKTCQ

Query:  ALLHS
        ALLHS
Subjt:  ALLHS
TrEMBL top hitse value%identityAlignment
A0A0A0KHL6 Uncharacterized protein2.3e-7399.29Show/hide
Query:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQTGLQNQHLLFRNPPHDLQSLNQLPKMKTCQ
        MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQTGLQNQHLLFRNPPHDLQSLNQLPKMKTCQ
Subjt:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQTGLQNQHLLFRNPPHDLQSLNQLPKMKTCQ

Query:  ALLHSCIASHNANKKGNLTHQNYSLHLPLLCFPPRGLPYSV
        ALLHSCIAS+NANKKGNLTHQNYSLHLPLLCFPPRGLPYSV
Subjt:  ALLHSCIASHNANKKGNLTHQNYSLHLPLLCFPPRGLPYSV
A0A1S4DTQ3 uncharacterized protein LOC103484528 isoform X23.9e-4998.1Show/hide
Query:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQTGLQNQHLLFRNPPHDLQSLNQLPKMKTCQ
        MQMG+PGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQT LQNQHLLFRNPPHDLQSLNQLPKMKTCQ
Subjt:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQTGLQNQHLLFRNPPHDLQSLNQLPKMKTCQ

Query:  ALLHS
        ALLHS
Subjt:  ALLHS
A0A5D3CMU3 Uncharacterized protein1.5e-2198.25Show/hide
Query:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALS
        MQMG+PGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALS
Subjt:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALS
F6HDB5 Uncharacterized protein (Fragment)7.1e-1150Show/hide
Query:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQTGLQNQHLLFRNP--------PHDLQSLNQ
        M M R G NAW++A+RYAIR  Y RT+SGVLTL  LL LP+T RN  M VYL    SL+L QRKL K  Q G  +   LF+N          H L    Q
Subjt:  MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQTGLQNQHLLFRNP--------PHDLQSLNQ

Query:  LPKM
         PKM
Subjt:  LPKM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATGGGGAGGCCTGGGACGAATGCTTGGAAGAATGCACTGAGATATGCTATAAGGATCCTGTATTTAAGGACCACCAGTGGAGTGCTTACATTGACCGATCTCCT
GGGTCTGCCAGTTACTCAGAGGAATGTTTCCATGCATGTGTATCTGGTTGCGGCTTTAAGTTTGAGGTTGAACCAGAGAAAGCTGACAAAATCCAACCAAACAGGCCTGC
AAAACCAGCACCTGTTGTTTCGAAACCCTCCCCACGACCTCCAATCACTGAATCAATTGCCAAAAATGAAGACTTGCCAAGCACTTCTGCATAGCTGCATAGCATCACAC
AATGCCAATAAAAAAGGAAACCTGACGCATCAAAATTATAGCTTACATCTCCCGTTGCTATGTTTTCCCCCTCGCGGGCTTCCATATTCTGTTGATTATAAATTATGA
mRNA sequenceShow/hide mRNA sequence
GTTGTAGACTTTTGGGTTAATTTGGGAATTTTTCGAAAATGATCAGAATAAGAAAATAGAAAATTAAGAGAAAACAAAAGCAAATCGCATATTCGTTCCTTTTGGGCTCA
TCCTCAGCATTACAAAGAAGAAAACAATCGGCAGGGAGCGTTGAAGATTTGAAGGAGGCTGTGTATTATATGATGATACCGCAACAATGGGCGTCTCCTTGTGGCAACCA
ATGCACGCAGAAATACGCTGCCCTCACCCAGATTCCATGGCGGGTATTTTGCAAAAAGGGGTGTGATGCAGATGGGGAGGCCTGGGACGAATGCTTGGAAGAATGCACTG
AGATATGCTATAAGGATCCTGTATTTAAGGACCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGGTCTGCCAGTTACTCAGAGGAATGTTTCCATGCATGTGTATCT
GGTTGCGGCTTTAAGTTTGAGGTTGAACCAGAGAAAGCTGACAAAATCCAACCAAACAGGCCTGCAAAACCAGCACCTGTTGTTTCGAAACCCTCCCCACGACCTCCAAT
CACTGAATCAATTGCCAAAAATGAAGACTTGCCAAGCACTTCTGCATAGCTGCATAGCATCACACAATGCCAATAAAAAAGGAAACCTGACGCATCAAAATTATAGCTTA
CATCTCCCGTTGCTATGTTTTCCCCCTCGCGGGCTTCCATATTCTGTTGATTATAAATTATGACAGTTACTTGTAAGTTTTAGTCCTTCCTTGCCTGTGAAAGGACTTAG
GTCTTTGACATAGATATTTGTCCTGTATGCTGAGAGTTGCTAATAGCCTGCCTTGATGTAGCTACCTCTCTGGCTTCAAAAGTTGGAGAATTTTGTGAAACGTTAATTTA
GTATGGCGAATTGGGGAATTGGGCAACTTGTTGTTTCGGAAGAGAAGTAAATTTCCGCTGTAGCTTGTCTTTCTTTTGTGTTTTTACAATTAGCTCGTAAAAGTAAATTA
GCAGGATTCAATTCATTAGGGATTTGAGAAATATAGTTTTCATATACTTTTTTTTTTCATTGAAATCGAGAGTTGGGTCTTTGGGAGATGTTCTCCGACTCCCAACCTGA
AATTGCTGTTTAGATGATCTGCTTCTAAGTTCCAGTGTTGTTTCTCTATTTCAACAAATGTTATTTTATAGGTGGATTTACCGATAACGAGAGGAAGACCAATTTCTAT
Protein sequenceShow/hide protein sequence
MQMGRPGTNAWKNALRYAIRILYLRTTSGVLTLTDLLGLPVTQRNVSMHVYLVAALSLRLNQRKLTKSNQTGLQNQHLLFRNPPHDLQSLNQLPKMKTCQALLHSCIASH
NANKKGNLTHQNYSLHLPLLCFPPRGLPYSVDYKL