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CSPI06G34700 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G34700
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionB3 domain-containing transcription factor LEC2
Genome locationChr6:28443143..28443532
RNA-Seq ExpressionCSPI06G34700
SyntenyCSPI06G34700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052680.1 B3 domain-containing transcription factor LEC2 [Cucumis melo var. makuwa]1.3e-5084.38Show/hide
Query:  MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED
        MEE+YKQKQ QQFSLSSNI+DQVKDEEEDASLALLIEELKHKAEDHHSHP  +F  N P N MI+STN+INYKEQ+ILDDFQG   INND NNGNVGFED
Subjt:  MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED

Query:  CFGGLDTLPEVSGFKFPLFDYFTSNNGT
        CFGGLDTLPEVSGFKFPLFDYF  NNGT
Subjt:  CFGGLDTLPEVSGFKFPLFDYFTSNNGT

KAG6604454.1 B3 domain-containing transcription factor LEC2, partial [Cucurbita argyrosperma subsp. sororia]8.2e-1342.22Show/hide
Query:  VKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDD----------------------FQGINNINNDINNGNV----
        +KDEEEDASLA+LIEELKHK ED         + +   ++  NS++H N    L+  D                      +  INN NN   NGN     
Subjt:  VKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDD----------------------FQGINNINNDINNGNV----

Query:  ------GFEDCFGGLDTLPEVSGFKFPLFDYFTSN
              G EDCF GLDTLPEVSGFKFPLFDY +++
Subjt:  ------GFEDCFGGLDTLPEVSGFKFPLFDYFTSN

KGN49235.1 hypothetical protein Csa_002728 [Cucumis sativus]3.2e-65100Show/hide
Query:  MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED
        MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED
Subjt:  MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED

Query:  CFGGLDTLPEVSGFKFPLFDYFTSNNGTA
        CFGGLDTLPEVSGFKFPLFDYFTSNNGTA
Subjt:  CFGGLDTLPEVSGFKFPLFDYFTSNNGTA

XP_011658520.1 B3 domain-containing transcription factor LEC2 [Cucumis sativus]3.2e-65100Show/hide
Query:  MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED
        MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED
Subjt:  MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED

Query:  CFGGLDTLPEVSGFKFPLFDYFTSNNGTA
        CFGGLDTLPEVSGFKFPLFDYFTSNNGTA
Subjt:  CFGGLDTLPEVSGFKFPLFDYFTSNNGTA

XP_022978701.1 B3 domain-containing transcription factor LEC2 isoform X2 [Cucurbita maxima]1.8e-1243.08Show/hide
Query:  VKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQ---------------GINNINNDINNGN------------
        +KDEEEDASLA+LIEELKHK ED    P +  T+    N+  N+ N+        L   Q               GI+N NN+    N            
Subjt:  VKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQ---------------GINNINNDINNGN------------

Query:  VGFEDCFGGLDTLPEVSGFKFPLFDYFTSN
         G EDCF GLDTLPEVSGFKFPLFDY +++
Subjt:  VGFEDCFGGLDTLPEVSGFKFPLFDYFTSN

TrEMBL top hitse value%identityAlignment
A0A0A0KHN2 Uncharacterized protein1.5e-65100Show/hide
Query:  MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED
        MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED
Subjt:  MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED

Query:  CFGGLDTLPEVSGFKFPLFDYFTSNNGTA
        CFGGLDTLPEVSGFKFPLFDYFTSNNGTA
Subjt:  CFGGLDTLPEVSGFKFPLFDYFTSNNGTA

A0A5A7UBY7 B3 domain-containing transcription factor LEC26.3e-5184.38Show/hide
Query:  MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED
        MEE+YKQKQ QQFSLSSNI+DQVKDEEEDASLALLIEELKHKAEDHHSHP  +F  N P N MI+STN+INYKEQ+ILDDFQG   INND NNGNVGFED
Subjt:  MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFED

Query:  CFGGLDTLPEVSGFKFPLFDYFTSNNGT
        CFGGLDTLPEVSGFKFPLFDYF  NNGT
Subjt:  CFGGLDTLPEVSGFKFPLFDYFTSNNGT

A0A6J1EJR4 B3 domain-containing transcription factor LEC24.4e-1241.67Show/hide
Query:  KQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDH--------HSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQG------INNINN----
        K  QQ S ++     +KDEEEDASLA+LIEELKHK ED          +  ++  + N   N ++ S ++++   Q    D  G       N+INN    
Subjt:  KQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDH--------HSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQG------INNINN----

Query:  --------DINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSN
                D+  GN G EDCF GLDTLPEVSGFKFPLFDY +++
Subjt:  --------DINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSN

A0A6J1IQY4 B3 domain-containing transcription factor LEC2 isoform X18.9e-1343.08Show/hide
Query:  VKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQ---------------GINNINNDINNGN------------
        +KDEEEDASLA+LIEELKHK ED    P +  T+    N+  N+ N+        L   Q               GI+N NN+    N            
Subjt:  VKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQ---------------GINNINNDINNGN------------

Query:  VGFEDCFGGLDTLPEVSGFKFPLFDYFTSN
         G EDCF GLDTLPEVSGFKFPLFDY +++
Subjt:  VGFEDCFGGLDTLPEVSGFKFPLFDYFTSN

A0A6J1IU08 B3 domain-containing transcription factor LEC2 isoform X28.9e-1343.08Show/hide
Query:  VKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQ---------------GINNINNDINNGN------------
        +KDEEEDASLA+LIEELKHK ED    P +  T+    N+  N+ N+        L   Q               GI+N NN+    N            
Subjt:  VKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQ---------------GINNINNDINNGN------------

Query:  VGFEDCFGGLDTLPEVSGFKFPLFDYFTSN
         G EDCF GLDTLPEVSGFKFPLFDY +++
Subjt:  VGFEDCFGGLDTLPEVSGFKFPLFDYFTSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGATTACAAGCAGAAGCAGCAGCAACAATTTAGTCTGTCGTCAAACATAGAGGATCAGGTGAAAGACGAAGAAGAAGATGCTTCTTTAGCTTTGTTAATCGA
AGAGCTTAAACACAAAGCTGAAGACCACCACAGCCATCCCACCACCTTTTTCACTGCTAATCCACCTATCAATACCATGATTAATTCTACAAATCATATTAATTATAAGG
AACAACTAATATTAGATGATTTCCAAGGGATTAATAATATTAATAATGATATCAATAATGGTAATGTGGGGTTTGAAGATTGCTTTGGAGGCCTTGATACTCTTCCTGAA
GTCAGTGGATTCAAGTTCCCTCTTTTTGACTATTTCACCAGTAATAATGGCACAGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGATTACAAGCAGAAGCAGCAGCAACAATTTAGTCTGTCGTCAAACATAGAGGATCAGGTGAAAGACGAAGAAGAAGATGCTTCTTTAGCTTTGTTAATCGA
AGAGCTTAAACACAAAGCTGAAGACCACCACAGCCATCCCACCACCTTTTTCACTGCTAATCCACCTATCAATACCATGATTAATTCTACAAATCATATTAATTATAAGG
AACAACTAATATTAGATGATTTCCAAGGGATTAATAATATTAATAATGATATCAATAATGGTAATGTGGGGTTTGAAGATTGCTTTGGAGGCCTTGATACTCTTCCTGAA
GTCAGTGGATTCAAGTTCCCTCTTTTTGACTATTTCACCAGTAATAATGGCACAGCCTGA
Protein sequenceShow/hide protein sequence
MEEDYKQKQQQQFSLSSNIEDQVKDEEEDASLALLIEELKHKAEDHHSHPTTFFTANPPINTMINSTNHINYKEQLILDDFQGINNINNDINNGNVGFEDCFGGLDTLPE
VSGFKFPLFDYFTSNNGTA