; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G34740 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G34740
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationChr6:28468364..28470430
RNA-Seq ExpressionCSPI06G34740
SyntenyCSPI06G34740
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026565.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-4768.75Show/hide
Query:  MANSEDQGW----EDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRF
        M +S DQGW    E+   +++DDD+D++EIGFV +ER++R+  + +R G GGGR++V RCQAD CN DL GA+ YHRRHKVCEFHS+AAVVILAGLEQRF
Subjt:  MANSEDQGW----EDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRF

Query:  CQQCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSST
        CQQCSRFH++SEFD+ KRSCR RLAGHNERRRK LPDF GQSST
Subjt:  CQQCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSST

XP_004134953.1 squamosa promoter-binding protein 1 [Cucumis sativus]4.5e-7399.29Show/hide
Query:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
        MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
Subjt:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC

Query:  SRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSSTN
        SRFHALSEFDD KRSCRMRLAGHNERRRKILPDFHGQSSTN
Subjt:  SRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSSTN

XP_008439842.1 PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo]9.2e-6689.44Show/hide
Query:  MANSEDQGWEDMIV-DDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ
        MANS D  WEDMI+ DDDDDDND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQADGCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIV-DDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ

Query:  CSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSSTN
        CSRFHA+SEFDD KRSCR RLAGHNERRRKILPDFHGQSSTN
Subjt:  CSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSSTN

XP_023004048.1 squamosa promoter-binding-like protein 3 [Cucurbita maxima]3.0e-4869.01Show/hide
Query:  MANSEDQGWEDMI--VDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQ
        M NS DQGW D +   +++++++D++E+GFV++ER++R+ ++S+R G GGGR++VARCQAD CN DL GA+ YHRRHKVCEFHS+AAVVILAGLEQRFCQ
Subjt:  MANSEDQGWEDMI--VDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQ

Query:  QCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSST
        QCSRFH++SEFD+ KRSCR RLAGHNERRRK LPDF GQSST
Subjt:  QCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSST

XP_038880830.1 squamosa promoter-binding protein 1-like [Benincasa hispida]1.0e-6184.4Show/hide
Query:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
        M NSEDQ WEDM+V++DDD++DNEEIGFV++ERRRRS LT  RGG GGGR TVARCQADGCNADL+ A+PYHRRHKVCEFH++AAVVILAGLEQRFCQQC
Subjt:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC

Query:  SRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSSTN
        SRFHA+SEFDD KRSCR RLAGHNERRRKILPDFHGQSSTN
Subjt:  SRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSSTN

TrEMBL top hitse value%identityAlignment
A0A0A0KK74 SBP-type domain-containing protein2.2e-7399.29Show/hide
Query:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
        MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
Subjt:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC

Query:  SRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSSTN
        SRFHALSEFDD KRSCRMRLAGHNERRRKILPDFHGQSSTN
Subjt:  SRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSSTN

A0A1S3AZN8 squamosa promoter-binding protein 14.4e-6689.44Show/hide
Query:  MANSEDQGWEDMIV-DDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ
        MANS D  WEDMI+ DDDDDDND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQADGCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIV-DDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ

Query:  CSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSSTN
        CSRFHA+SEFDD KRSCR RLAGHNERRRKILPDFHGQSSTN
Subjt:  CSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSSTN

A0A5A7UDV9 Squamosa promoter-binding protein 13.1e-4388.35Show/hide
Query:  MANSEDQGWEDMIV-DDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ
        MANS D  WEDMI+ DDDDDDND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQADGCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMIV-DDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQ

Query:  CSR
        CSR
Subjt:  CSR

A0A6J1EFR3 Squamosa promoter-binding-like protein3.0e-4667.36Show/hide
Query:  MANSEDQGW----EDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRF
        M +S DQGW    E+   +++++D+D++EIGFV +ER++R+  + +R G GGGR++V RCQAD CN DL GA+ YHRRHKVCEFHS+AAVVILAGLEQRF
Subjt:  MANSEDQGW----EDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRF

Query:  CQQCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSST
        CQQCSRFH++SEFD+ KRSCR RLAGHNERRRK LPDF GQSST
Subjt:  CQQCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSST

A0A6J1KYC6 Squamosa promoter-binding-like protein1.4e-4869.01Show/hide
Query:  MANSEDQGWEDMI--VDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQ
        M NS DQGW D +   +++++++D++E+GFV++ER++R+ ++S+R G GGGR++VARCQAD CN DL GA+ YHRRHKVCEFHS+AAVVILAGLEQRFCQ
Subjt:  MANSEDQGWEDMI--VDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQ

Query:  QCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSST
        QCSRFH++SEFD+ KRSCR RLAGHNERRRK LPDF GQSST
Subjt:  QCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSST

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 101.2e-2868.24Show/hide
Query:  GGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRK
        G GG      RCQA+GC ADL+GAK YHRRHKVCE+H++A+VV  +G +QRFCQQCSRFH L+EFD+ KRSCR RLA HN RRRK
Subjt:  GGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRK

Q0DAE8 Squamosa promoter-binding-like protein 101.2e-2868.24Show/hide
Query:  GGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRK
        G GG      RCQA+GC ADL+GAK YHRRHKVCE+H++A+VV  +G +QRFCQQCSRFH L+EFD+ KRSCR RLA HN RRRK
Subjt:  GGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRK

Q0E3F8 Squamosa promoter-binding-like protein 57.1e-2969.41Show/hide
Query:  RCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSS
        RCQA+GC ADL+ AK YHRRHKVC+FH++AA V+ AG +QRFCQQCSRFH L+EFD+ KRSCR RL  HN RRRK  P   GQSS
Subjt:  RCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSS

Q38741 Squamosa promoter-binding protein 13.2e-2951.85Show/hide
Query:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC
        +  S++QG E     +DD   D+++   +    +R SG            ST   CQ + C A++T AKPYHRRHKVCEFH++A VV+ +GL+QRFCQQC
Subjt:  MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQC

Query:  SRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFH
        SRFH LSEFD+ KRSCR RLAGHNERRRK   D H
Subjt:  SRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFH

Q8GXL3 Squamosa promoter-binding-like protein 82.7e-2865.98Show/hide
Query:  RRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRK
        RR R G       G     +  RCQA+GCNADL+ AK YHRRHKVCEFHS+A+ V+ AGL QRFCQQCSRFH LSEFD+ KRSCR RLA HN RRRK
Subjt:  RRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRK

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 81.9e-2965.98Show/hide
Query:  RRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRK
        RR R G       G     +  RCQA+GCNADL+ AK YHRRHKVCEFHS+A+ V+ AGL QRFCQQCSRFH LSEFD+ KRSCR RLA HN RRRK
Subjt:  RRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRK

AT1G69170.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein1.8e-2755.56Show/hide
Query:  VDDDDDDNDNEEIGF-VDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDI
        +D  +DD+D    GF + +++ R S L S              CQ  GC+ DL+ +K YH+RH+VCE HS+ +VVI+ GLEQRFCQQCSRFH LSEFDD 
Subjt:  VDDDDDDNDNEEIGF-VDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDI

Query:  KRSCRMRLAGHNERRRK
        KRSCR RLAGHNERRRK
Subjt:  KRSCRMRLAGHNERRRK

AT1G76580.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein2.8e-2857.14Show/hide
Query:  VDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRR
        VD  R  +   + + G GGGG     +CQ D C  DL+ AK YHRRHKVCE HS+A   ++    QRFCQQCSRFH LSEFD+ KRSCR RL GHN RRR
Subjt:  VDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRR

Query:  KILPD
        K  PD
Subjt:  KILPD

AT2G42200.1 squamosa promoter binding protein-like 92.8e-2864.44Show/hide
Query:  RGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRKILP
        RGGG G    + RCQ +GC  DLT AK Y+ RH+VC  HS+   V +AG+EQRFCQQCSRFH L EFD  KRSCR RLAGHNERRRK  P
Subjt:  RGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRKILP

AT3G60030.1 squamosa promoter-binding protein-like 122.5e-2961.05Show/hide
Query:  GGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSST
        GGG  S    CQ D C ADL+  K YHRRHKVCE HS+A   ++ G+ QRFCQQCSRFH L EFD+ KRSCR RLAGHN+RRRK  PD  G  ++
Subjt:  GGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDIKRSCRMRLAGHNERRRKILPDFHGQSST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTCAGAAGATCAAGGTTGGGAGGACATGATTGTAGATGACGACGACGACGATAACGACAACGAAGAAATAGGGTTTGTAGATAATGAGAGGAGGAGGAGATC
TGGTTTAACCAGTGCTCGGGGTGGTGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACCGGTGCAAAACCGTACCACCGCC
GCCACAAGGTCTGCGAGTTCCACTCCAGGGCGGCTGTGGTGATTCTGGCCGGATTGGAACAGCGATTTTGCCAGCAGTGTAGTAGGTTTCATGCATTATCGGAATTCGAT
GACATAAAGAGAAGCTGCCGGATGCGTTTGGCTGGTCACAATGAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCCACTAATTGA
mRNA sequenceShow/hide mRNA sequence
AAGACTTCTCTTAGAAAATGGCAAACTCAGAAGATCAAGGTTGGGAGGACATGATTGTAGATGACGACGACGACGATAACGACAACGAAGAAATAGGGTTTGTAGATAAT
GAGAGGAGGAGGAGATCTGGTTTAACCAGTGCTCGGGGTGGTGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACCGGTGC
AAAACCGTACCACCGCCGCCACAAGGTCTGCGAGTTCCACTCCAGGGCGGCTGTGGTGATTCTGGCCGGATTGGAACAGCGATTTTGCCAGCAGTGTAGTAGGTTTCATG
CATTATCGGAATTCGATGACATAAAGAGAAGCTGCCGGATGCGTTTGGCTGGTCACAATGAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCCACTAAT
TGAACCACACACACTCTCACTGTGTCCACTAGTTACCTAATTAATAATAAATAACAATAATGATACACTCATTACTAATGAAGAATAAGAAGAAGAAGAAGAAGAAAAGA
AGAAAGAGCTGCTGGTTATTGGAGTTAATTTTGTGTTGAGAGAGAGTCACAGGTCATTCTGGTTATTCTGGTCACCAGTCACCGGCGGCCACCGTGATGAAAAATGAATT
TTTATGCTTTCTCTCTTCTGTCATCAAAAGAAAACCCAATTTATAGCCCTCTTTGTAATCATAATAATAATAAGTAAATAGATAACAAAGAGATGATCAGATGGTTTATG
GTACTTTTTGCCTCAGTCACATATCACTAAAATCTGTGTGGGATATCTTTCTTTCTTTTTCTTTAACATTGTAGCTGTAGGTTATGTATGGAAGCCGGCCTATGTGTTTA
ATTTAATTGTAGTTTGTTATATTAATTAATGATGTTTTGTAAAAGAAATTACCTAGGGC
Protein sequenceShow/hide protein sequence
MANSEDQGWEDMIVDDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFD
DIKRSCRMRLAGHNERRRKILPDFHGQSSTN