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CSPI06G34860 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G34860
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X5
Genome locationChr6:28522006..28524344
RNA-Seq ExpressionCSPI06G34860
SyntenyCSPI06G34860
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134688.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]3.6e-41100Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED

XP_004134690.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X5 [Cucumis sativus]7.2e-42100Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDG
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDG
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDG

XP_004134691.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X4 [Cucumis sativus]1.8e-40100Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE

XP_004134692.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X3 [Cucumis sativus]3.6e-41100Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED

XP_011658221.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]1.8e-40100Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE

TrEMBL top hitse value%identityAlignment
A0A0A0KHP8 Uncharacterized protein2.8e-9298.95Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDGKEL
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED KEL
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDGKEL

Query:  NLDHFIGDVELIINHKNESASNTTSMILISSTTQIAMMMYDEYRMVRALALKRQDAEIKFLNDECILLSRTYLRIVRDCVLLNLAKRLAV
        NLDHFIGDVELIINHKNESASNTTSMILISSTTQIAMMMYDEYRMVRALALKRQDAEIKFLNDECILLSRTYLRIV DCVLLNLAKRLAV
Subjt:  NLDHFIGDVELIINHKNESASNTTSMILISSTTQIAMMMYDEYRMVRALALKRQDAEIKFLNDECILLSRTYLRIVRDCVLLNLAKRLAV

A0A6J1CL58 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X53.2e-3586.6Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDG
        MS+AAAMAARSA RST+ARA ISGR T  AK KSA SPF +PKQNPLSQSHRILRSPVE+SCC+ESLLPYHSATASALLTSMLSVSRRSYGWTPEDG
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDG

A0A6J1CMC1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X31.6e-3486.46Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED
        MS+AAAMAARSA RST+ARA ISGR T  AK KSA SPF +PKQNPLSQSHRILRSPVE+SCC+ESLLPYHSATASALLTSMLSVSRRSYGWTPED
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED

A0A6J1EDP6 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X67.1e-3587.63Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDG
        MSSAAAMAARSAFRSTLARA IS R T+ AK KS  SPF+IPKQNPLSQSHRILRSPVE+SCC+ESLLPYHSATASALLTSMLSVSRRSYGWT EDG
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDG

A0A6J1IV08 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X67.1e-3587.63Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDG
        MSSAAAMAARSAFRSTLARA IS R T+ AK KS  SPF+IPKQNPLSQSHRILRSPVE+SCC+ESLLPYHSATASALLTSMLSVSRRSYGWT EDG
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.4e-1154.26Show/hide
Query:  SSAAAMAARSAFRSTLAR--APISGRFTSSAKTKSAPSPF-AIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGW
        +SA    ARS  R+  +R  A  +GRF S A  KSAP  F A  +++PL      LR+PVELS C+ESLLPYHSATASAL+TS LS+S ++YGW
Subjt:  SSAAAMAARSAFRSTLAR--APISGRFTSSAKTKSAPSPF-AIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGW

Arabidopsis top hitse value%identityAlignment
AT1G28395.2 unknown protein2.5e-1660.23Show/hide
Query:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGW
        AARS FRS  +RA  +  RF++  K    SA + F +PKQ+PL  ++RI RSPVELSCC+E++LPYH+ATASALL SMLSVSRR  GW
Subjt:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGW

AT1G28395.4 unknown protein5.0e-1758.7Show/hide
Query:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED
        AARS FRS  +RA  +  RF++  K    SA + F +PKQ+PL  ++RI RSPVELSCC+E++LPYH+ATASALL SMLSVSRR  GW  +D
Subjt:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED

AT1G28395.5 unknown protein1.0e-1759.14Show/hide
Query:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDG
        AARS FRS  +RA  +  RF++  K    SA + F +PKQ+PL  ++RI RSPVELSCC+E++LPYH+ATASALL SMLSVSRR  GW  +DG
Subjt:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDG

AT2G33847.1 unknown protein7.0e-1960.67Show/hide
Query:  AARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED
        AARS FRS + RA ++   ++     SA S F +PKQ+PL  SHRI RSPVELSCC+E++LPYH+ATASALL SMLSVS RS  WT +D
Subjt:  AARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPED

AT2G33847.2 unknown protein2.7e-1861.63Show/hide
Query:  AARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWT
        AARS FRS + RA ++   ++     SA S F +PKQ+PL  SHRI RSPVELSCC+E++LPYH+ATASALL SMLSVS RS  WT
Subjt:  AARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCGACCCTAGCCCGAGCACCTATCTCCGGCAGGTTTACCAGCAGTGCCAAAACGAAATCAGCTCCATC
TCCGTTTGCCATCCCTAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCACCTGTTGAGTTGAGTTGCTGTCTGGAATCCTTGCTTCCTTACCACTCTGCTA
CTGCTTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTCCTGAAGACGGTAAAGAGCTCAATCTTGATCATTTTATTGGGGATGTTGAA
TTAATAATAAACCATAAGAACGAGTCGGCAAGTAATACGACAAGTATGATATTGATTTCTTCTACCACTCAGATTGCAATGATGATGTATGATGAATATCGGATGGTTCG
AGCACTTGCCCTCAAAAGACAAGATGCTGAAATAAAATTCTTGAATGATGAATGCATACTACTCAGCAGGACTTACCTAAGGATCGTGAGAGATTGCGTATTGCTGAACT
TGGCTAAGCGACTTGCTGTG
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCGACCCTAGCCCGAGCACCTATCTCCGGCAGGTTTACCAGCAGTGCCAAAACGAAATCAGCTCCATC
TCCGTTTGCCATCCCTAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCACCTGTTGAGTTGAGTTGCTGTCTGGAATCCTTGCTTCCTTACCACTCTGCTA
CTGCTTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTCCTGAAGACGGTAAAGAGCTCAATCTTGATCATTTTATTGGGGATGTTGAA
TTAATAATAAACCATAAGAACGAGTCGGCAAGTAATACGACAAGTATGATATTGATTTCTTCTACCACTCAGATTGCAATGATGATGTATGATGAATATCGGATGGTTCG
AGCACTTGCCCTCAAAAGACAAGATGCTGAAATAAAATTCTTGAATGATGAATGCATACTACTCAGCAGGACTTACCTAAGGATCGTGAGAGATTGCGTATTGCTGAACT
TGGCTAAGCGACTTGCTGTG
Protein sequenceShow/hide protein sequence
MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEDGKELNLDHFIGDVE
LIINHKNESASNTTSMILISSTTQIAMMMYDEYRMVRALALKRQDAEIKFLNDECILLSRTYLRIVRDCVLLNLAKRLAV