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CSPI06G34870 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G34870
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:28526510..28527436
RNA-Seq ExpressionCSPI06G34870
SyntenyCSPI06G34870
Gene Ontology termsNA
InterPro domainsIPR040344 - Uncharacterized protein At3g17950-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052669.1 uncharacterized protein E6C27_scaffold120G002790 [Cucumis melo var. makuwa]3.6e-4485.12Show/hide
Query:  MADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANSAGRRVDDSKTKNAGEHEIISGRI
        MADSGTH LPS  PSP++LIPSFSFSSLSSSELDTLSTASFFQD SVSLGRLIGLKPADK WLY PTEEKKSV+ANSAG R+DDSKTK AGEHEI    I
Subjt:  MADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANSAGRRVDDSKTKNAGEHEIISGRI

Query:  CIPIVIGVILQMIRSRRNSRS
        CIPIVIGVIL+MIRSRRNS S
Subjt:  CIPIVIGVILQMIRSRRNSRS

XP_008439814.1 PREDICTED: uncharacterized protein LOC103484500 [Cucumis melo]2.3e-5986.09Show/hide
Query:  MFNQSD---HQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEK
        MFNQSD   HQDLLNGWPLGLQVMN+TLRLMADSGTH LPS  PSP++LIPSFSFSSLSSSELDTLSTASFFQD SVSLGRLIGLKPADK WLY PTEEK
Subjt:  MFNQSD---HQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEK

Query:  KSVSANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS
        KSV+ANSAG RVDDSKTK AGEHEI    ICIPIVIGVIL+MIRSRRNS S
Subjt:  KSVSANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS

XP_011658225.1 uncharacterized protein LOC105435964 [Cucumis sativus]5.6e-7499.32Show/hide
Query:  MFNQSDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSV
        MFNQSDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSV
Subjt:  MFNQSDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSV

Query:  SANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSR
        SANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVIL+MIRSRRNSR
Subjt:  SANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSR

XP_023517383.1 uncharacterized protein LOC111781162 [Cucurbita pepo subsp. pepo]3.4e-3967.36Show/hide
Query:  SDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANS
        S+ QD+LNGWPLGL+VMN+ +R MADS    LP   P P   IPS SFSSLSSSELDT+STASFFQD SVSLGRLIG++P DKTWLY PT+E   VS NS
Subjt:  SDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANS

Query:  AGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS
        A   +D  KTK+A     ISGRICIPI+IG++L+MIRSRRNSRS
Subjt:  AGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS

XP_038883341.1 uncharacterized protein At3g17950-like [Benincasa hispida]1.1e-4876.67Show/hide
Query:  MFNQSDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLP--SAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKK
        M N +DHQ +LNGWPLGLQVMN+ LR+MA  G   LP      S +L IPS SFSSLSSSELDTLSTASFFQD SVSLGRLIGLKPADKTWLYFPTEE +
Subjt:  MFNQSDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLP--SAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKK

Query:  SVSANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS
        SVS NSAG  +DDSKT NA E+E ISGRICIPIVIGVIL+MIRSRRNSRS
Subjt:  SVSANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS

TrEMBL top hitse value%identityAlignment
A0A0A0KNE6 Uncharacterized protein2.7e-7499.32Show/hide
Query:  MFNQSDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSV
        MFNQSDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSV
Subjt:  MFNQSDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSV

Query:  SANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSR
        SANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVIL+MIRSRRNSR
Subjt:  SANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSR

A0A1S3B0C9 uncharacterized protein LOC1034845001.1e-5986.09Show/hide
Query:  MFNQSD---HQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEK
        MFNQSD   HQDLLNGWPLGLQVMN+TLRLMADSGTH LPS  PSP++LIPSFSFSSLSSSELDTLSTASFFQD SVSLGRLIGLKPADK WLY PTEEK
Subjt:  MFNQSD---HQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEK

Query:  KSVSANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS
        KSV+ANSAG RVDDSKTK AGEHEI    ICIPIVIGVIL+MIRSRRNS S
Subjt:  KSVSANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS

A0A5A7UGM6 Uncharacterized protein1.7e-4485.12Show/hide
Query:  MADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANSAGRRVDDSKTKNAGEHEIISGRI
        MADSGTH LPS  PSP++LIPSFSFSSLSSSELDTLSTASFFQD SVSLGRLIGLKPADK WLY PTEEKKSV+ANSAG R+DDSKTK AGEHEI    I
Subjt:  MADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANSAGRRVDDSKTKNAGEHEIISGRI

Query:  CIPIVIGVILQMIRSRRNSRS
        CIPIVIGVIL+MIRSRRNS S
Subjt:  CIPIVIGVILQMIRSRRNSRS

A0A6J1EFZ8 uncharacterized protein LOC1114338326.3e-3965.97Show/hide
Query:  SDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANS
        S+ +D++NGWPLGL+VMN+ +R MADS    LP   P P   IPS SFSSLSSSELDT+STASFFQD SVSLGRLIG++P DKTWLY PT+E   VS NS
Subjt:  SDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANS

Query:  AGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS
        A   +D  KTK+A     ISGRICIPI+IG++L+MIRSRRNSRS
Subjt:  AGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS

A0A6J1KXT6 uncharacterized protein LOC1114973163.7e-3966.67Show/hide
Query:  SDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANS
        S+ QD+LNGWPLGL+VMN+ +R MADS    LP   P P   IPS SFSSLSSSEL+T+STASFFQD SVSLGRLIG++P DKTWLY PT+E   VSANS
Subjt:  SDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANS

Query:  AGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS
        A   +D  KTK+A     ISGRICIPI+IG++L+MI+SRRNSRS
Subjt:  AGRRVDDSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17950.1 unknown protein5.0e-0438.46Show/hide
Query:  SFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANSAGRRVDDSKTK
        + SS+SSS+LDT ST SFF D S++LG L+G        + F    ++ VS + A  R   S  +
Subjt:  SFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANSAGRRVDDSKTK

AT5G02440.1 unknown protein5.9e-0540.48Show/hide
Query:  HQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSL--------SSSELDTLSTASFFQDPSVSLGRLIGL
        HQ+   GWPLGL+ +N+ +  +     H     Q S      S SFSSL        SSS+LD+ S  SFF+D S +LG LIG+
Subjt:  HQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSL--------SSSELDTLSTASFFQDPSVSLGRLIGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAACCAATCTGATCATCAAGATCTTCTCAATGGTTGGCCGCTTGGACTTCAGGTCATGAACTCCACACTTCGATTAATGGCTGATTCAGGAACACACACATTACC
ATCTGCCCAACCTTCCCCTAATTTGCTCATTCCTTCATTCAGTTTCTCCTCTCTCTCTTCCTCTGAACTCGACACTCTGTCGACGGCCTCCTTCTTTCAAGACCCTAGCG
TATCGCTTGGACGGCTGATTGGACTAAAGCCGGCCGACAAGACGTGGTTGTACTTCCCGACCGAGGAGAAAAAGAGTGTGTCGGCTAATTCTGCTGGCCGCCGCGTAGAT
GATTCCAAAACGAAGAACGCCGGTGAACATGAAATTATATCGGGACGAATCTGCATTCCGATTGTGATTGGTGTGATCTTGCAGATGATTAGAAGTCGGAGAAATTCCAG
AAGTTGA
mRNA sequenceShow/hide mRNA sequence
GTGATTTTCACATTCAATATATATATATATATAAATACTATCACATTTCATGCAATAATATCTCATCTGTTCTCACCAAACGATTCATTCCAAAACCTCCATGTTTAACC
AATCTGATCATCAAGATCTTCTCAATGGTTGGCCGCTTGGACTTCAGGTCATGAACTCCACACTTCGATTAATGGCTGATTCAGGAACACACACATTACCATCTGCCCAA
CCTTCCCCTAATTTGCTCATTCCTTCATTCAGTTTCTCCTCTCTCTCTTCCTCTGAACTCGACACTCTGTCGACGGCCTCCTTCTTTCAAGACCCTAGCGTATCGCTTGG
ACGGCTGATTGGACTAAAGCCGGCCGACAAGACGTGGTTGTACTTCCCGACCGAGGAGAAAAAGAGTGTGTCGGCTAATTCTGCTGGCCGCCGCGTAGATGATTCCAAAA
CGAAGAACGCCGGTGAACATGAAATTATATCGGGACGAATCTGCATTCCGATTGTGATTGGTGTGATCTTGCAGATGATTAGAAGTCGGAGAAATTCCAGAAGTTGAAGT
GTAGTGTAGGATAAATTATTCCTTGGACCTGATTCTTAGAAATTTGTTATGATGGAAGATTATTGAGTCTAATAAATAAATCTCGGTTGGTTTTCTTGGATTTTAAAAGC
TGTGTTCAACAGTTTCAATGTCTAATCTACCTCAAGAGTATAAAACAAAATACGGATCAAGAGTTTGAGATTTCATTTTCCCGAGAAA
Protein sequenceShow/hide protein sequence
MFNQSDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANSAGRRVD
DSKTKNAGEHEIISGRICIPIVIGVILQMIRSRRNSRS