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CSPI06G35370 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G35370
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:28790672..28791610
RNA-Seq ExpressionCSPI06G35370
SyntenyCSPI06G35370
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034644.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-3877.19Show/hide
Query:  MNNPRSRIVILPIILRQLAGKGPAIRRRLGSPTTSSDGYVTERPTGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLHLCFVTFTTAGD
        MNNPRS IV LPII+RQL GK PAI RRLGSP++SSDG + ERPT SPVPLTTL EMS LINIVIV+VTEFGVH LTSWT NNLFRPLHLC +TFTTA  
Subjt:  MNNPRSRIVILPIILRQLAGKGPAIRRRLGSPTTSSDGYVTERPTGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLHLCFVTFTTAGD

Query:  RSAFLRFLLQFSGL
         +AFLR +L FSGL
Subjt:  RSAFLRFLLQFSGL
PON36759.1 hypothetical protein PanWU01x14_325740 [Parasponia andersonii]8.0e-0563.64Show/hide
Query:  TGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPL
        T SPV LT+  EM+RL++IVIV V EFGVHT+T+ TW NL R L
Subjt:  TGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPL
PON93576.1 hypothetical protein TorRG33x02_105600 [Trema orientale]6.1e-0557.41Show/hide
Query:  SSDGYVTERPTGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPL
        SS   V    T SPV LT+  EM+RL++IVIV V EFGVHT+T+ TW NL R L
Subjt:  SSDGYVTERPTGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPL
TrEMBL top hitse value%identityAlignment
A0A0A0KHV6 Uncharacterized protein3.2e-6096Show/hide
Query:  MPPLHRIQFKLMNNPRSRIVILPIILRQLAGKGPAIRRRLGSPTTSSDGYVTERPTGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLH
        MPPLHRIQFKLMNNPRSRIVILPIILRQLAGKGPAIRRRLGS TTSSDGYVTERPTG PVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLH
Subjt:  MPPLHRIQFKLMNNPRSRIVILPIILRQLAGKGPAIRRRLGSPTTSSDGYVTERPTGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLH

Query:  LCFVTFTTAGDRSAFLRFLLQFSGL
        LCF+TFTTAGDRS+FL FLLQFSGL
Subjt:  LCFVTFTTAGDRSAFLRFLLQFSGL
A0A2P5AJN7 Uncharacterized protein3.9e-0563.64Show/hide
Query:  TGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPL
        T SPV LT+  EM+RL++IVIV V EFGVHT+T+ TW NL R L
Subjt:  TGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPL
A0A2P5F742 Uncharacterized protein3.0e-0557.41Show/hide
Query:  SSDGYVTERPTGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPL
        SS   V    T SPV LT+  EM+RL++IVIV V EFGVHT+T+ TW NL R L
Subjt:  SSDGYVTERPTGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCCCTCCACCGTATCCAATTCAAGCTGATGAATAATCCCAGAAGCCGCATCGTAATACTGCCCATAATCCTCAGACAGCTCGCCGGAAAGGGTCCGGCAATTAG
GCGGCGGCTTGGCTCTCCGACGACCAGCTCCGATGGGTACGTTACGGAGCGCCCCACCGGCAGTCCAGTACCTTTGACAACCCTTGCAGAAATGTCTAGGCTGATTAACA
TTGTAATTGTTGAAGTAACAGAATTTGGTGTCCATACTCTTACATCTTGGACATGGAATAATCTTTTCCGGCCTCTTCATCTCTGTTTCGTCACCTTCACCACCGCCGGC
GACCGCTCCGCCTTTCTCCGGTTCCTCCTTCAATTTTCGGGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
CAACCGCCGTGCATCACACGCTATATTTTTTTTTCAAATTAATTATCATTAATTTCGATAGCCCACTTTAGAAACCTTGCAAATTTGAAAATTAATCCTCATCATCTCAA
TCCCATATATCCCATCCCCCAATATGAATCATCGGATCATCAGCTCTTGATTAACCACACAGATAAATATGTATTTACATTATCATATCTCTCCAGTAATTAATTTAAAC
TCTATATCTCTAATTTCCACATAAAGTCATCAAAGAAAAAAAAAGAAGAAGAAGAAGAAGTTAAGACGATTGACCGTGTTGACCGATAATCTTCCGGCGTTTGAAAGGAA
AAACTTTGGTAAAATCCTGTTCCGCCACCGTCAGATGCCACCCCTCCACCGTATCCAATTCAAGCTGATGAATAATCCCAGAAGCCGCATCGTAATACTGCCCATAATCC
TCAGACAGCTCGCCGGAAAGGGTCCGGCAATTAGGCGGCGGCTTGGCTCTCCGACGACCAGCTCCGATGGGTACGTTACGGAGCGCCCCACCGGCAGTCCAGTACCTTTG
ACAACCCTTGCAGAAATGTCTAGGCTGATTAACATTGTAATTGTTGAAGTAACAGAATTTGGTGTCCATACTCTTACATCTTGGACATGGAATAATCTTTTCCGGCCTCT
TCATCTCTGTTTCGTCACCTTCACCACCGCCGGCGACCGCTCCGCCTTTCTCCGGTTCCTCCTTCAATTTTCGGGTTTGTAAATGAATCATAGTTCCAAAAAGTTTAATT
CCATCGGTGTTGCTACTATGAACCTCAGCCATATGTAAAAACAGAGAGAGAAACAGAGACCACTCAGGAACTTTTTCCCCCCCACCTCCCTAAATTATTCTGTGTGTTTT
GGAAGAGTGTATTGTGTAGAGAAGACATATAGGGAAATGGGTTTATATATGAATTGAGA
Protein sequenceShow/hide protein sequence
MPPLHRIQFKLMNNPRSRIVILPIILRQLAGKGPAIRRRLGSPTTSSDGYVTERPTGSPVPLTTLAEMSRLINIVIVEVTEFGVHTLTSWTWNNLFRPLHLCFVTFTTAG
DRSAFLRFLLQFSGL